prot_M-pyrifera_M_contig122245.4590.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122245.4590.1
Unique Nameprot_M-pyrifera_M_contig122245.4590.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length83
Homology
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: A0A8J9ZED1_BRALA (Hypp1028 protein n=1 Tax=Branchiostoma lanceolatum TaxID=7740 RepID=A0A8J9ZED1_BRALA)

HSP 1 Score: 64.3 bits (155), Expect = 3.670e-10
Identity = 30/80 (37.50%), Postives = 49/80 (61.25%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   +N + ++ P+FE    +  W +T G+M   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  371 MDKLRLEIRAMDEIQPDLRELLETMNRLSSLPPDFEGKTTVSRWLQTFGTMQAHDELDDNQVRQMLFDLESAYNAFNRQL 450          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: C3ZD31_BRAFL (Vacuolar protein sorting-associated protein 28 homolog n=3 Tax=Branchiostoma TaxID=7737 RepID=C3ZD31_BRAFL)

HSP 1 Score: 62.0 bits (149), Expect = 9.660e-10
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   +N + ++ P+FE    +  W +T  +M   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  138 MDKLRLEIRAMDEIQPDLRELLETMNRLSSLPPDFEGKATVSRWLQTFSNMQAHDELDDNQVRQMLFDLESAYNAFNRQL 217          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: UPI000777D620 (vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Coturnix japonica TaxID=93934 RepID=UPI000777D620)

HSP 1 Score: 59.7 bits (143), Expect = 3.090e-9
Identity = 30/80 (37.50%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+   + P++ ++   +N + A+  +FE    + +W +T+ SM   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:   79 MDKLRLEIRAXXXIQPDLRELLETMNRMSALPSDFEGRHHVLHWLQTLSSMSASDELDDNQVRQMLFDLESAYNAFNRCL 158          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: UPI001C3555A8 ((large yellow croaker) hypothetical protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=UPI001C3555A8)

HSP 1 Score: 60.1 bits (144), Expect = 3.770e-9
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   +N +  + P+ E+ + +  W  T+ SM   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  112 MDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDKVSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFL 191          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: A0A7J7R4B4_MYOMY (Vacuolar protein sorting-associated protein 28 homolog n=4 Tax=Laurasiatheria TaxID=314145 RepID=A0A7J7R4B4_MYOMY)

HSP 1 Score: 60.5 bits (145), Expect = 3.790e-9
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   ++ +  + P+FE  + +  W +T+  M   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  140 MDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDNQVRQMLFDLESAYNAFNRFL 219          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: A0A7J7R432_MYOMY (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Laurasiatheria TaxID=314145 RepID=A0A7J7R432_MYOMY)

HSP 1 Score: 60.5 bits (145), Expect = 3.910e-9
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   ++ +  + P+FE  + +  W +T+  M   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  143 MDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDNQVRQMLFDLESAYNAFNRFL 222          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: L8H286_ACACA (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H286_ACACA)

HSP 1 Score: 60.1 bits (144), Expect = 4.150e-9
Identity = 31/83 (37.35%), Postives = 48/83 (57.83%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHLGIG 83
            MD L+    +  ++ P +  +   LN I A++P FE    + +W   + SM   +EL+++QVRQL FDLE +Y A +N LG G
Sbjct:  118 MDSLKLNMNAIDQVHPLLTDLFESLNRISALAPNFEGKAKVRHWLSLMASMKASDELNDEQVRQLLFDLETSYTAFHNSLGGG 200          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: A0A7J7RLE4_PIPKU (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Pipistrellus kuhlii TaxID=59472 RepID=A0A7J7RLE4_PIPKU)

HSP 1 Score: 60.5 bits (145), Expect = 4.170e-9
Identity = 28/80 (35.00%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   ++ +  + P+FE  + +  W +T+  M   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  149 MDKLRLEIRAMDEIQPDLRELMETMHRMSHLPPDFEGRQTVSQWLQTLSGMSASDELDDNQVRQMLFDLESAYNAFNRFL 228          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: A0A3Q2WKV0_HAPBU (Vacuolar protein sorting-associated protein 28 homolog n=1 Tax=Haplochromis burtoni TaxID=8153 RepID=A0A3Q2WKV0_HAPBU)

HSP 1 Score: 60.1 bits (144), Expect = 4.200e-9
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   +N +  + P+ E+ + +  W  T+ SM   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  120 MDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDKVSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFL 199          
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Match: A0A3Q0RTK0_AMPCI (Vacuolar protein sorting-associated protein 28 homolog n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q0RTK0_AMPCI)

HSP 1 Score: 60.1 bits (144), Expect = 4.540e-9
Identity = 29/80 (36.25%), Postives = 48/80 (60.00%), Query Frame = 0
Query:    1 MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGSMDLLEELDEDQVRQLRFDLEKAYNALNNHL 80
            MD L    R+  ++ P++ ++   +N +  + P+ E+ + +  W  T+ SM   +ELD++QVRQ+ FDLE AYNA N  L
Sbjct:  126 MDKLRLEIRAMDEIQPDLRELMETMNRMSNMPPDSEAKDKVSLWLTTLSSMSASDELDDNQVRQMLFDLESAYNAFNRFL 205          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122245.4590.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J9ZED1_BRALA3.670e-1037.50Hypp1028 protein n=1 Tax=Branchiostoma lanceolatum... [more]
C3ZD31_BRAFL9.660e-1036.25Vacuolar protein sorting-associated protein 28 hom... [more]
UPI000777D6203.090e-937.50vacuolar protein sorting-associated protein 28 hom... [more]
UPI001C3555A83.770e-936.25(large yellow croaker) hypothetical protein n=1 Ta... [more]
A0A7J7R4B4_MYOMY3.790e-935.00Vacuolar protein sorting-associated protein 28 hom... [more]
A0A7J7R432_MYOMY3.910e-935.00Vacuolar protein sorting-associated protein 28 hom... [more]
L8H286_ACACA4.150e-937.35Vacuolar protein sorting-associated protein 28 hom... [more]
A0A7J7RLE4_PIPKU4.170e-935.00Vacuolar protein sorting-associated protein 28 hom... [more]
A0A3Q2WKV0_HAPBU4.200e-936.25Vacuolar protein sorting-associated protein 28 hom... [more]
A0A3Q0RTK0_AMPCI4.540e-936.25Vacuolar protein sorting-associated protein 28 hom... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037206VPS28, C-terminal domain superfamilyGENE3D1.20.120.1130coord: 1..81
e-value: 8.5E-16
score: 59.7
IPR037206VPS28, C-terminal domain superfamilySUPERFAMILY140427VPS28 C-terminal domain-likecoord: 1..80
IPR007143Vacuolar protein sorting-associated Vps28PFAMPF03997VPS28coord: 1..80
e-value: 8.0E-12
score: 45.2
IPR017899Vacuolar protein sorting-associated, VPS28, C-terminalPROSITEPS51310VPS28_Ccoord: 1..81
score: 17.902

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122245contigM-pyrifera_M_contig122245:263..511 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122245.4590.1mRNA_M-pyrifera_M_contig122245.4590.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122245 263..523 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122245.4590.1 ID=prot_M-pyrifera_M_contig122245.4590.1|Name=mRNA_M-pyrifera_M_contig122245.4590.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=83bp
MDGLEYGHRSKTKLFPNIIKIKNLLNGIPAVSPEFESVEIIEYWSRTIGS
MDLLEELDEDQVRQLRFDLEKAYNALNNHLGIG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037206VPS28_C_sf
IPR007143Vps28
IPR017899VPS28_C