prot_M-pyrifera_M_contig122239.4585.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig122239.4585.1
Unique Name	prot_M-pyrifera_M_contig122239.4585.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	90

Homology

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BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Match: A0A2E7KJT2_9PLAN (Uncharacterized protein n=4 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KJT2_9PLAN)

HSP 1 Score: 175 bits (443), Expect = 9.780e-55
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0

Query:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTYEAPQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLGA 90
            MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTYEAPQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLGA
Sbjct:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTYEAPQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLGA 90

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BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Match: A0A6I6ACM3_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6ACM3_9PLAN)

HSP 1 Score: 154 bits (388), Expect = 2.330e-46
Identity = 81/90 (90.00%), Postives = 83/90 (92.22%), Query Frame = 0

Query:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTYEAPQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLGA 90
            MDWFTFLILLLTASLTA AVWWAIQKWFR ESE I EDSA  AG+YEAPQ ALYWNFTTVLIAVCILLLVLGISVQTTSLR+PITWTLGA
Sbjct:    1 MDWFTFLILLLTASLTALAVWWAIQKWFRVESESIVEDSASIAGSYEAPQHALYWNFTTVLIAVCILLLVLGISVQTTSLRDPITWTLGA 90

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BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Match: A0A518FQ38_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518FQ38_9PLAN)

HSP 1 Score: 134 bits (336), Expect = 2.090e-38
Identity = 74/94 (78.72%), Postives = 78/94 (82.98%), Query Frame = 0

Query:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISE----DSAPSAGTYEAPQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLGA 90
            MDWFTFLILLLTASLTA AVWWAIQKWFRDE+E ISE    D  P     E PQ ALYWNFT+VLIAVC LLLVLGISVQTTS+RNP+TWTLGA
Sbjct:    1 MDWFTFLILLLTASLTALAVWWAIQKWFRDEAESISEASFQDIHPVTDDSE-PQHALYWNFTSVLIAVCALLLVLGISVQTTSIRNPVTWTLGA 93

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BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Match: A0A517Q1F6_9PLAN (Uncharacterized protein n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q1F6_9PLAN)

HSP 1 Score: 131 bits (330), Expect = 1.710e-37
Identity = 72/93 (77.42%), Postives = 77/93 (82.80%), Query Frame = 0

Query:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSA----PSAGTYEAPQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLG 89
            MDWFTFLILLLTASLTA AVWWAIQKWFRDESE +SE++     P     E PQ ALYWNFTTVLI+VC LLLVLGISVQT S+RNPITWTLG
Sbjct:    1 MDWFTFLILLLTASLTALAVWWAIQKWFRDESESVSEETMQDIHPVTDESE-PQHALYWNFTTVLISVCTLLLVLGISVQTMSIRNPITWTLG 92

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BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Match: A0A518I6V6_9PLAN (Uncharacterized protein n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I6V6_9PLAN)

HSP 1 Score: 67.4 bits (163), Expect = 3.250e-12
Identity = 46/92 (50.00%), Postives = 55/92 (59.78%), Query Frame = 0

Query:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTY--EAPQQA--LYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTL 88
            M+WF FLI LLTA   +  VW+AI+  FR +SE  S    P         P  A  L+WNFT  LI V  LLLVLGIS+QT S R+P+T TL
Sbjct:    1 MEWFAFLIYLLTAVCCSLLVWFAIKVGFRTDSEPESTSHQPEETNVVDSIPDAARKLHWNFTAALIVVPTLLLVLGISMQTASWRHPVTGTL 92

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BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Match: A0A517WT05_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WT05_9PLAN)

HSP 1 Score: 57.8 bits (138), Expect = 1.800e-8
Identity = 38/93 (40.86%), Postives = 52/93 (55.91%), Query Frame = 0

Query:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTYEA----PQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLG 89
            M+WF FLI  L A      +W+ I+  FRD   + SE   P     +      ++ LYWNF++VLI +  LLLVLGISV+   L +P+  TLG
Sbjct:    1 MEWFAFLIYFLIAFFCTLVLWFMIKVCFRDT--IPSEPKLPEPKEIDTIPLVAKERLYWNFSSVLIVILTLLLVLGISVRDLPLSHPVILTLG 91

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BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Match: A0A517W2V6_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W2V6_9PLAN)

HSP 1 Score: 55.8 bits (133), Expect = 8.560e-8
Identity = 37/93 (39.78%), Postives = 51/93 (54.84%), Query Frame = 0

Query:    1 MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTYEA----PQQALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLG 89
            M+WF FLI  L A      +W+ I+  FR  +   SE   P     +      ++ LYWNF++VLI +  LLLVLGISV+   L +P+  TLG
Sbjct:    1 MEWFAFLIYFLIAFFCTLVLWFTIKVGFRGSAS--SEPMLPEPKEIDTFPLVAKERLYWNFSSVLIVILTLLLVLGISVRDLPLSHPVVLTLG 91

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig122239.4585.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 7


Match Name	E-value	Identity	Description
A0A2E7KJT2_9PLAN	9.780e-55	100.00	Uncharacterized protein n=4 Tax=Gimesia TaxID=1649...	[more]
A0A6I6ACM3_9PLAN	2.330e-46	90.00	Uncharacterized protein n=2 Tax=Gimesia TaxID=1649...	[more]
A0A518FQ38_9PLAN	2.090e-38	78.72	Uncharacterized protein n=1 Tax=Gimesia panareensi...	[more]
A0A517Q1F6_9PLAN	1.710e-37	77.42	Uncharacterized protein n=1 Tax=Gimesia panareensi...	[more]
A0A518I6V6_9PLAN	3.250e-12	50.00	Uncharacterized protein n=1 Tax=Gimesia fumaroli T...	[more]
A0A517WT05_9PLAN	1.800e-8	40.86	Uncharacterized protein n=1 Tax=Gimesia aquarii Ta...	[more]
A0A517W2V6_9PLAN	8.560e-8	39.78	Uncharacterized protein n=1 Tax=Gimesia aquarii Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 16..19
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 74..90
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..19
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..73
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 20..52
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 4..15
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..3
None	No IPR available	SIGNALP_EUK	SignalP-TM	SignalP-TM	coord: 1..18 score: 0.708
None	No IPR available	TMHMM	TMhelix		coord: 7..24
None	No IPR available	TMHMM	TMhelix		coord: 53..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig122239	contig	M-pyrifera_M_contig122239:2..271 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig122239.4585.1	mRNA_M-pyrifera_M_contig122239.4585.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig122239 2..271 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig122239.4585.1 ID=prot_M-pyrifera_M_contig122239.4585.1|Name=mRNA_M-pyrifera_M_contig122239.4585.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
MDWFTFLILLLTASLTASAVWWAIQKWFRDESELISEDSAPSAGTYEAPQ
QALYWNFTTVLIAVCILLLVLGISVQTTSLRNPITWTLGA