mRNA_M-pyrifera_M_contig1220.4529.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A6H5L5C3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5C3_9PHAE) HSP 1 Score: 432 bits (1112), Expect = 1.530e-136 Identity = 265/460 (57.61%), Postives = 300/460 (65.22%), Query Frame = 1
Query: 190 LLFSSDDLGS-GTGLGDELGYSSYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTS-----------GTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAALVFPQEVVNNDMTECMRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFLVGNDVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIGIPVRNLPLLDPTQAKQAGVTHSFGLAHGCP----------TPTRTSAQTADRLSLGATTPAANVRSAAFAAESSDGSGSRKAPKGRGRVGKESCDSAVRSTDS--------GKACTKDAADSAESGLGDERTDRACGEDDDMHDVGETLSPSIATTAPGLGVEAEPDSRRNS--RHSLEGATPPSLQTSMRWVSPSPTP 1473
LLF +DLG+ G+GLGD+LGYSSYCRKDKSLGLLCGRFVEVYG +QH +D+ GG G GD EGMIELD+AA ELGV RRRIYDVINILES+CVVTRARKNTYRWHGK NL+LTLRQLQRTA VFP+EV N MTEC++ AKL +AIGSLGGP+ADGTKEKSLGGLCRRFVQLFLVGNDVVSV EAAEKLSDP DVA +TVVFKTRARRLYDIANALAALGLV+KVRS+DSCKPNFRWIG+PVR LPLLDP+QA+Q G GL H +PT TS SL T PAA S AF + + +G A S T G D +GLG +D++D+GE +P A A G G E +SRR+ R S +G +PPS S RWVSPS TP
Sbjct: 390 LLFCREDLGAAGSGLGDDLGYSSYCRKDKSLGLLCGRFVEVYGHSQHFRDRVAGGXXXXXXXXXXXXXXXXXXXGDKGDDEEGMIELDKAAAELGVARRRIYDVINILESVCVVTRARKNTYRWHGKKNLILTLRQLQRTATHVFPEEVAKNGMTECLKQAKLIGNAIGSLGGPRADGTKEKSLGGLCRRFVQLFLVGNDVVSVGEAAEKLSDPSDVAGSTVVFKTRARRLYDIANALAALGLVDKVRSKDSCKPNFRWIGVPVRTLPLLDPSQAQQTGAV--AGLQHAAAAATADNNRLLSPTTTSGPCPKSGSL--TAPAAPA-SNAFGYAAGEATGGVVAAXXXXXXXXXXPASPAVGTPGFSCNPLGVGTPTASKGNDVENAGLGTAGGAGDAWAKNDLNDMGEVWTPLAAGVA-GFGTEVGSESRRSRPRRPSFDGMSPPSTLASTRWVSPSDTP 843
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: D8LJE0_ECTSI (Putative Del transcription factor (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJE0_ECTSI) HSP 1 Score: 364 bits (935), Expect = 1.850e-111 Identity = 189/255 (74.12%), Postives = 209/255 (81.96%), Query Frame = 1
Query: 190 LLFSSDDLGS-GTGLGDELGYSSYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGG--------------KMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAALVFPQEVVNNDMTECMRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFLVGNDVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDS 909
LLF +DLG+ G+GLGD+LGYSSYCRKDKSLGLLCGRFVEVYG +QH +D+ GG G GDG EGMIELD+AA ELGV RRRIYDVINILES+CVVTRARKNTYRWHGK NL+LTLRQLQRTA VFP+EV N MTEC++ AKL +A+GSLGGP+ADGTKEKSLGGLCRRFVQLFLVGNDVVSV EAAEKLS+P DVA +TVVFKTRARRLYDIANALAALGLV+KVRS+DS
Sbjct: 374 LLFCREDLGAAGSGLGDDLGYSSYCRKDKSLGLLCGRFVEVYGHSQHFRDRVAGGGPVXXXXXXXXXXXXXXAGGKKGDKGDGEEGMIELDKAAAELGVARRRIYDVINILESVCVVTRARKNTYRWHGKKNLILTLRQLQRTATHVFPEEVAKNGMTECLKQAKLIGNAVGSLGGPRADGTKEKSLGGLCRRFVQLFLVGNDVVSVGEAAEKLSEPSDVAGSTVVFKTRARRLYDIANALAALGLVDKVRSKDS 628
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A7S1B9K5_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B9K5_9STRA) HSP 1 Score: 163 bits (412), Expect = 9.860e-43 Identity = 97/236 (41.10%), Postives = 137/236 (58.05%), Query Frame = 1
Query: 253 SYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAALVFPQEVVNNDMTECMRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFLVGNDVVSVAEAAEK-LSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIGIPVRNLP 957
+Y RKDKSLGLLC F+ YG + + D +DG I +D AA LGV RRRIYD+INILES+ +V R KNTY W+GK +L L +LQ+ A ++P++ N + + + S K + K+KSLG L ++F+Q+FLVGN+V+S+AEA+EK L P + KT+ RRLYDIAN + ++G+++KV KP+F+W IP LP
Sbjct: 20 TYSRKDKSLGLLCENFMSRYGEMKKV-DDSDG-------------------ISIDAAANALGVERRRIYDIINILESIEIVRRKCKNTYIWYGKEHLGYVLARLQQQAFTMWPEDAKTNGLLS------EGSIILNSDNKTKTESNKDKSLGRLSQKFIQMFLVGNNVLSLAEASEKILGCPSNSRNEEKGMKTKVRRLYDIANVMVSIGIIQKVILSRFKKPSFKWDFIPPPKLP 229
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A7S1TBV1_9RHOD (Hypothetical protein n=1 Tax=Compsopogon caeruleus TaxID=31354 RepID=A0A7S1TBV1_9RHOD) HSP 1 Score: 144 bits (362), Expect = 2.630e-34 Identity = 107/272 (39.34%), Postives = 144/272 (52.94%), Query Frame = 1
Query: 199 SSDDLGSGTGLGDE-LGYSSYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAALVFPQEVVNNDMTEC--------MRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFLV-GNDVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIGIPVRNL-PLLDPTQAK 981
S G G G DE +Y RKDKSLG LC F+ +YGR KD D E + LD AA++LGV RRRIYD++N+LES+ VV R KN Y WHG + L TL L + AAL + + +T+ ++N + + GG + K+KSLG L +RFVQLFL G+ VVS+ +AA L V + + KT+ RRLYDIAN L +L L+ K ++ D KP FRW+G N+ P D T ++
Sbjct: 34 SGSSSGPGVGSPDEGPNDQAYSRKDKSLGRLCENFLNLYGR---CKDD----------------DSDE--VCLDAAAQKLGVERRRIYDIVNVLESVGVVVRKAKNRYTWHGANRLEETLSAL-KDAALSPTKSCNDGGVTDLQFTPQNTPVKNQESESETKKGSGGNR----KDKSLGKLSQRFVQLFLTAGDSVVSIDQAASALLGSDVVDVDSSIHKTKVRRLYDIANILTSLSLITKTQTSDK-KPGFRWLGPNAANIAPDTDETNSR 278
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A7S3Q8J9_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q8J9_9STRA) HSP 1 Score: 144 bits (363), Expect = 5.930e-34 Identity = 109/334 (32.63%), Postives = 159/334 (47.60%), Query Frame = 1
Query: 253 SYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAALVFPQEVVNNDMTEC-MRNAKLPASAIGSLGGP--------KADGTK-----------------------------------------EKSLGGLCRRFVQLFLVGNDVVSVAEAAEKLSDPGDVAEA----------------TVVFKTRARRLYDIANALAALGLVEKVRSRDS-------CKPNFRWI-GIPVRNLPLLDP-------TQAKQAGVTHSFGL 1011
+Y RKDKSLG+LC F+ Y + QH K TD P T +D A++ L V RRRIYD+INILE++ VVTR KNTY W G N+ TLR++Q A +FPQ+VV N + E + A+ + + + G K DGTK EKSLG L ++F+QLFLVGN+ +++ EA++K+ ++ +A + KT+ RRLYDIAN +A++GL+ K+ S + +P+F+WI + R + L D TQ K+ + FG+
Sbjct: 74 AYRRKDKSLGVLCANFMRRYNKIQHEKP-TDAPHPPEVT--------------IDEASQSLMVERRRIYDIINILEAIEVVTRKGKNTYNWFGMDNINDTLRKMQTEAFTLFPQDVVFNGLHEVKLEEAEAAVAKVAAQAGNGGVGTVPVKEDGTKAEDEADGDSSSLPTGFAMLLASAEQVEAKKKKPKAKKGTSKEKSLGRLSQKFIQLFLVGNETITLEEASDKILGKTNLPQAPPDASADEILKIRNANNKMIKTKIRRLYDIANIMASVGLIAKMNSDNQHVGSAPRSRPSFKWIYPLTARQILLGDNGIMCVGGTQEKRNLIEEHFGM 392
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A0K9R2D5_SPIOL (Uncharacterized protein n=2 Tax=Spinacia oleracea TaxID=3562 RepID=A0A0K9R2D5_SPIOL) HSP 1 Score: 140 bits (353), Expect = 1.140e-33 Identity = 97/267 (36.33%), Postives = 135/267 (50.56%), Query Frame = 1
Query: 256 YCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAAL---------------VFPQEVVNNDMTECMRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFLVGN-DVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIGIPVR------NLPLLDPTQAKQAG 990
Y RK KSLGLLC +F+ +Y R DG E I LD AA +LGV RRRIYD++N+LES+ V+ R KN Y W G + L L+ VF E N + +LP S + S K D +EKSLG L + FV+LF+ N D++S+ EAA+ L G ++V +T+ RRLYDIAN L+++ L+EK + ++ KP FRW+G+ R NLP+ T+ + G
Sbjct: 20 YSRKQKSLGLLCSKFLNLYDR-----------------------DGVES-IGLDDAASKLGVERRRIYDIVNVLESVGVLARKAKNQYTWKGFKGIPKALAALKEEGLRENFGSASGSGKMKFHVFDDEEDENSNPDTGSQPELPNSNVNS----KPDNRREKSLGLLTQNFVKLFICSNVDLISLEEAAKILLGDG---HNSIVMRTKVRRLYDIANVLSSMQLIEKTQQTETRKPAFRWLGLSERKEVALYNLPMSIDTKKRTFG 255
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A5B6ZH65_DAVIN (Putative E2F transcription factor-like E2FE isoform X2 n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B6ZH65_DAVIN) HSP 1 Score: 140 bits (352), Expect = 1.310e-33 Identity = 90/230 (39.13%), Postives = 125/230 (54.35%), Query Frame = 1
Query: 253 SYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAALVFPQEVVNNDMTECMRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFLVGN-DVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIGI 939
+YCRK KSLGLLC F+ +Y R DG E I LD AA LGV RRRIYD++N+LES+ V+ R KN Y W G + L+ L+ + E +N T + P+S + K D KEKSLG L + FV+LFL N D++S+ EAA+ L GD + + + +T+ RRLYDIAN L+++ +EK ++ KP FRW+G+
Sbjct: 17 TYCRKQKSLGLLCTNFLSLYNR-----------------------DGVE-TIGLDDAASRLGVERRRIYDIVNVLESIGVLARKAKNRYSWKGFGEIPKVLQDLKVSDD--DEDERFSNLSTSSQNDKSNPSSVLKFSASSKTDNRKEKSLGLLTQNFVKLFLRSNVDLISLDEAAKTLL--GDARDPSTM-RTKVRRLYDIANVLSSMNFIEKTHHPETRKPAFRWLGM 217
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A1Q3D535_CEPFO (E2F_TDP domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3D535_CEPFO) HSP 1 Score: 140 bits (352), Expect = 2.190e-33 Identity = 98/252 (38.89%), Postives = 136/252 (53.97%), Query Frame = 1
Query: 253 SYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTA---------------ALVFPQ-----EVVNNDMTECMRNAKLPASAIGSLGGPKA--DGTKEKSLGGLCRRFVQLFLVGN-DVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIGI 939
+Y RK KSLGLLC F+ +Y R DG E +I LD AA +LGV RRRIYD++N+LES+ V+ R KN Y W G + L+QL+ AL + EV +N T + +P +G PK+ D +EKSLG L + FV+LFL N D++S+ EAA+ L GD A ++ + +T+ RRLYDIAN L++L L+EK +RD+ KP FRW+G+
Sbjct: 19 TYSRKQKSLGLLCSNFLSLYNR-----------------------DGIE-LIGLDDAAAKLGVERRRIYDIVNVLESVGVLARKAKNKYTWKGFGAIPKALKQLKEEGVSEKYNNLDGIDSAKALDYDDXXXXXEVFSNPNTGSQSDNSIP------IGIPKSRTDNRREKSLGLLTQNFVKLFLCSNADLISLDEAAKLLL--GD-AHSSSIMRTKVRRLYDIANVLSSLSLIEKTHARDTRKPAFRWLGV 237
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: A0A166B6Z5_DAUCS (Uncharacterized protein n=2 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=A0A166B6Z5_DAUCS) HSP 1 Score: 141 bits (355), Expect = 2.340e-33 Identity = 94/240 (39.17%), Postives = 130/240 (54.17%), Query Frame = 1
Query: 250 SSYCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTAALVFPQEVVNNDMTECMRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFL-VGNDVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIGIPVRNLPLLD 966
S+Y RKDKSL LLC F+++Y R D + + +D AA +LGV RRRIYD++NI+ES+ V+ R KN Y W G + L LQ + N TE R+ S+ PK + KEKSL L + FV+LFL G D++S+ AA L PGDV + T + +T+ARRLYDIAN A++ L+EKVR +S KP FRW+G+ ++ L+
Sbjct: 24 SNYSRKDKSLALLCSNFLKLYNR-----DDVE-------------------CVGVDAAAAQLGVERRRIYDIVNIMESIGVLVRKAKNQYCWKGFDAIPQALHDLQ----------ISNEKETE--RSPSDSNKEEKSVSCPKTESRKEKSLALLAKNFVKLFLRSGADIISLDSAATAL--PGDVHDTTAM-RTKARRLYDIANVFASMNLIEKVRHPESGKPAFRWLGMKQKSSNALE 224
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Match: UPI0018AE240E (E2F transcription factor-like E2FF n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE240E) HSP 1 Score: 139 bits (350), Expect = 4.170e-33 Identity = 94/240 (39.17%), Postives = 128/240 (53.33%), Query Frame = 1
Query: 256 YCRKDKSLGLLCGRFVEVYGRNQHLKDQTDGGKMPVSTTSGTAGDGPEGMIELDRAAEELGVVRRRIYDVINILESLCVVTRARKNTYRWHGKSNLVLTLRQLQRTA------------ALVFPQEVVNNDMTECMRNAKLPASAIGSLGGPKADGTKEKSLGGLCRRFVQLFLVGN-DVVSVAEAAEKLSDPGDVAEATVVFKTRARRLYDIANALAALGLVEKVRSRDSCKPNFRWIG 936
Y RK KSLGLLC FV +Y R+ V + I LD AA++LGV RRRIYD++N++ES+ V+TR KN Y W G S + L L++ A +E N+ + + S+ GS ++D KEKSLG L + FV+LFL N D VS+ EAA L GD +AT + KT+ RRLYDIAN L+++ L+EK + + KP FRW+G
Sbjct: 18 YSRKQKSLGLLCSNFVSLYNRDD------------VES------------ISLDDAAKQLGVERRRIYDIVNVMESVGVLTRKAKNRYSWIGFSGIPKALEDLKKEALRDLSRYPGDDQCSQVSEEEENDRSMDHEEGIREDKSSSGSHKNVRSDNRKEKSLGQLTQNFVKLFLTSNADTVSLDEAARLLL--GDCNDATQM-KTKVRRLYDIANVLSSMNLIEKTQQVVTKKPAFRWLG 230 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1220.4529.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig1220.4529.1 >prot_M-pyrifera_M_contig1220.4529.1 ID=prot_M-pyrifera_M_contig1220.4529.1|Name=mRNA_M-pyrifera_M_contig1220.4529.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=491bp SPLPPPPPPPPPIPLAVRKPSREDGGGFGLGFGFAPGSGGNGSGSGGGGGback to top mRNA from alignment at M-pyrifera_M_contig1220:19294..28339- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig1220.4529.1 ID=mRNA_M-pyrifera_M_contig1220.4529.1|Name=mRNA_M-pyrifera_M_contig1220.4529.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9046bp|location=Sequence derived from alignment at M-pyrifera_M_contig1220:19294..28339- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig1220:19294..28339- >mRNA_M-pyrifera_M_contig1220.4529.1 ID=mRNA_M-pyrifera_M_contig1220.4529.1|Name=mRNA_M-pyrifera_M_contig1220.4529.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2946bp|location=Sequence derived from alignment at M-pyrifera_M_contig1220:19294..28339- (Macrocystis pyrifera P11B4 male)back to top |