mRNA_M-pyrifera_M_contig122.4526.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: D7G477_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G477_ECTSI) HSP 1 Score: 423 bits (1088), Expect = 5.080e-141 Identity = 267/499 (53.51%), Postives = 338/499 (67.74%), Query Frame = 1
Query: 1 QTAAKDEAKYVHMFEQLGTEDGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEVPTTSTRTKLLERSNVQSPA-TLRTAKNAGGTEMVSSRSPKRRSRLASLIGDEQCRQVHLGADTSQGRRDIRNVQEPAILQREGHDHEKTAVSTPLGALA---------LGYDELDNGREENAGNDEHHWEPRSKHSLKLRQLNAEDVDAVFAEGKRAINSLRDVQSWRVLVMGLHRLAEKDMTRGAPVTLPTRRRHSLPVAVQGELAHKQEFLPGQGRRTSLLVTAYEPAALFLKKRAKHRSAREAELEKATAIAASKWNLEPVTENFESTTGGGQVDATVGNLNVSGLPLLNEDIDVIVHLLRQNFGFKKLDLSRCFLSDKHFVSLAQALAWNCRVEEICLKXXXXXXXXXXXXXXXXXXXKHIRSIDIRGCQGVREKGLREVLRAAGIKSNLLMINGIDLAALRAETSDVLDLNG 1467
Q + DE +Y +FE+L TEDGYL K+A +L KSG+ +ETL++VWALAD D DGRLSLKEFCTAM+L+ F++GLPLPEVP+ + + QSP + + G E+ ++SPKRRSRLASL+ Q D + I EP + + T G+ + EL R+E + +H + R + LRQL+ +DVDAVFAEG AINSLRDVQSWRVLVMGL RL+ KDM R P + RRRH+LP+A +G+LA KQ++LPG+GRRTSLL TAYEPAALFLK+RA+ RS REA+LEK TA AA KWNL+P+ E E G+ ++ GNL+V+GLPLL+ED+D+IVHLLRQN FK+LDLSRCFLS+K FVSLAQALAWN R+EE+ XXXXXXXXXXXXXXXXXXX S+D+RGC+G+ EK ++ +L A K NLL NG++LA LRAE SD LDL+G
Sbjct: 10 QDSPVDEHRYAKIFEKLDTEDGYLSGKRAVVLLRKSGVPQETLSKVWALADSDVDGRLSLKEFCTAMHLIGCFRKGLPLPEVPSRKPK----KPKKRQSPGGDTKPREGQGKREITFAKSPKRRSRLASLVDPHQ--------DANPPGASIAKSHEPLLPLSRIRKSATLWILTLCGSRSPMITSQWKSRRLKELRQHRKEAEESRDHGGQSRIRRP-NLRQLDDKDVDAVFAEGPGAINSLRDVQSWRVLVMGLQRLSGKDMARHVPTNVRPRRRHTLPLAAKGDLARKQDYLPGRGRRTSLLGTAYEPAALFLKQRAERRSIREADLEKDTAKAAEKWNLKPLREKSERCESDGEQTSSRGNLSVAGLPLLDEDVDIIVHLLRQNHAFKRLDLSRCFLSEKQFVSLAQALAWNSRIEELFXXXXXXXXXXXXXXXXXXXXXXXXHSLDVRGCKGLDEKSIKVILGGARSKGNLLTFNGMNLADLRAEGSDELDLSG 495
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A498IX82_MALDO (Uncharacterized protein n=4 Tax=Maleae TaxID=721813 RepID=A0A498IX82_MALDO) HSP 1 Score: 71.6 bits (174), Expect = 2.090e-9 Identity = 39/97 (40.21%), Postives = 60/97 (61.86%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEVPTTSTRTKLLERSNVQSPA 303
D KY ++F ++ T+ DG + +QA + K GL + L QVW L+D D D LS++EFC A+YL++ F+ G PLP V ++ +L+ SN+ PA
Sbjct: 436 DVQKYTNIFVKVDTDRDGKITGEQARDLFLKWGLPRDVLKQVWDLSDQDNDSMLSVREFCVALYLMERFREGRPLPAVLPSNV---MLDLSNISQPA 529
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A2R6WQV7_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6WQV7_MARPO) HSP 1 Score: 70.5 bits (171), Expect = 4.600e-9 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEV 246
D +Y +F ++ T+ DG + +QA + GL E L QVW L+D D D LSL+EFCTA+YL++ F+ G PLP V
Sbjct: 360 DAQRYTRVFAEVDTDRDGKITGEQARDLFLSWGLPREVLKQVWDLSDQDGDSMLSLREFCTALYLMERFREGRPLPPV 437
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A540NTD4_MALBA (Uncharacterized protein n=6 Tax=Maleae TaxID=721813 RepID=A0A540NTD4_MALBA) HSP 1 Score: 70.1 bits (170), Expect = 6.150e-9 Identity = 39/97 (40.21%), Postives = 59/97 (60.82%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEVPTTSTRTKLLERSNVQSPA 303
D KY ++F ++ T+ DG + +QA + K GL E L QVW L+D D D LS++EFC A+YL++ F+ G PLP V ++ + + SN+ PA
Sbjct: 438 DVQKYTNIFVKVDTDRDGKITGEQARDLFLKWGLPREVLKQVWDLSDQDNDSMLSVREFCVALYLMERFREGRPLPAVLPSNV---MFDLSNIFQPA 531
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A5C7HR62_9ROSI (Uncharacterized protein n=1 Tax=Acer yangbiense TaxID=1000413 RepID=A0A5C7HR62_9ROSI) HSP 1 Score: 69.3 bits (168), Expect = 1.070e-8 Identity = 36/81 (44.44%), Postives = 50/81 (61.73%), Query Frame = 1
Query: 7 AAKDEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEV 246
A D KY +F Q+ T+ DG + +QA ++ L E L QVW L+D D D LSLKEFCTA+YL++ ++ G PLP +
Sbjct: 393 AQSDVQKYTKVFVQVDTDRDGKITGEQARNLFLSWRLPREILKQVWDLSDQDNDSMLSLKEFCTALYLMERYREGRPLPAI 473
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A835DML7_9MAGN (Uncharacterized protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DML7_9MAGN) HSP 1 Score: 68.6 bits (166), Expect = 1.810e-8 Identity = 35/78 (44.87%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEV 246
D KY +F ++ T+ DG + +QA ++ L E L QVW L+D D D LSLKEFCTA+YL++ ++ G PLP V
Sbjct: 408 DVQKYTKVFVEVDTDRDGKITGEQARNLFLSWRLPREVLKQVWDLSDQDSDSMLSLKEFCTALYLMERYREGRPLPAV 485
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A835I3I4_9MAGN (Uncharacterized protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835I3I4_9MAGN) HSP 1 Score: 68.6 bits (166), Expect = 1.820e-8 Identity = 35/78 (44.87%), Postives = 50/78 (64.10%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEV 246
D KY +F ++ T+ DG + +QA ++ LQ E L QVW L+D D D LSL+EFCTA+YL++ ++ G PLP V
Sbjct: 410 DIQKYTKVFVEVDTDRDGKITGEQARNLFLSWRLQREVLKQVWDLSDQDNDSMLSLREFCTALYLMERYREGRPLPAV 487
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A7N0UE91_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UE91_KALFE) HSP 1 Score: 68.6 bits (166), Expect = 1.820e-8 Identity = 36/78 (46.15%), Postives = 48/78 (61.54%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEV 246
D KY +F ++ T+ DG +G QA + L E L QVW L+D D D LSLKEFC A+YL++ F+ G PLP+V
Sbjct: 272 DIQKYTRVFVEVDTDRDGKIGGIQARDLFLSWRLPREILKQVWDLSDQDNDSMLSLKEFCIALYLMERFREGRPLPQV 349
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A1L7B560_MARPO (Short rhizoids 2 n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A1L7B560_MARPO) HSP 1 Score: 68.2 bits (165), Expect = 2.460e-8 Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLPEV 246
D +Y +F + T+ DG + QA + GL E L QVW L+D D D LSL+EFCTA+YL++ F+ G PLP V
Sbjct: 400 DVQRYTRVFYDVDTDKDGKITGGQARDLFLSWGLPREVLKQVWDLSDQDGDSELSLREFCTALYLMERFREGRPLPPV 477
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Match: A0A251MZP3_PRUPE (Uncharacterized protein n=12 Tax=Prunus TaxID=3754 RepID=A0A251MZP3_PRUPE) HSP 1 Score: 68.2 bits (165), Expect = 2.470e-8 Identity = 34/76 (44.74%), Postives = 49/76 (64.47%), Query Frame = 1
Query: 16 DEAKYVHMFEQLGTE-DGYLGAKQATSVLGKSGLQEETLTQVWALADCDCDGRLSLKEFCTAMYLVDAFKRGLPLP 240
D KY ++F ++ T+ DG + +QA + K GL E L QVW L+D D D LSL+EFC A+YL++ ++ G PLP
Sbjct: 438 DAQKYSNIFVKVDTDRDGKITGEQARDLFLKWGLPREVLKQVWDLSDQDNDSMLSLREFCVALYLMERYREGRPLP 513 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122.4526.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig122.4526.1 >prot_M-pyrifera_M_contig122.4526.1 ID=prot_M-pyrifera_M_contig122.4526.1|Name=mRNA_M-pyrifera_M_contig122.4526.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=490bp QTAAKDEAKYVHMFEQLGTEDGYLGAKQATSVLGKSGLQEETLTQVWALAback to top mRNA from alignment at M-pyrifera_M_contig122:17712..22954- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig122.4526.1 ID=mRNA_M-pyrifera_M_contig122.4526.1|Name=mRNA_M-pyrifera_M_contig122.4526.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5243bp|location=Sequence derived from alignment at M-pyrifera_M_contig122:17712..22954- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig122:17712..22954- >mRNA_M-pyrifera_M_contig122.4526.1 ID=mRNA_M-pyrifera_M_contig122.4526.1|Name=mRNA_M-pyrifera_M_contig122.4526.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2940bp|location=Sequence derived from alignment at M-pyrifera_M_contig122:17712..22954- (Macrocystis pyrifera P11B4 male)back to top |