mRNA_M-pyrifera_M_contig121946.4507.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A5B9NH46_9CAUD (Lysozyme n=2 Tax=unclassified Siphoviridae TaxID=196894 RepID=A0A5B9NH46_9CAUD) HSP 1 Score: 57.8 bits (138), Expect = 5.320e-8 Identity = 30/60 (50.00%), Postives = 41/60 (68.33%), Query Frame = 1
Query: 1 PIAETTTTAPPPTTQLNYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSI 180
P+A+ TT T Y V+SGD+LSVIA +FG++T +L N+N ISD N I VGQ+L +
Sbjct: 205 PVAKKPTTKEKVTAVTTYTVKSGDALSVIAQKFGVTTKDLQNWNGISDPNKIYVGQKLRV 264
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A1W9UMB8_9CHLR (Uncharacterized protein n=1 Tax=Anaerolineaceae bacterium 4572_32.1 TaxID=1971623 RepID=A0A1W9UMB8_9CHLR) HSP 1 Score: 56.6 bits (135), Expect = 1.510e-7 Identity = 32/67 (47.76%), Postives = 44/67 (65.67%), Query Frame = 1
Query: 4 IAETTTTAPPPTTQLNYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIPPTTVATP 204
I +T +P PT +Y+VQ GD+LS+IA RFG + + +A N I + N I+VGQ L+IP T ATP
Sbjct: 79 IVPLSTVSPLPTHPADYLVQLGDTLSLIAQRFGTTVETIAQANGIVNPNLIIVGQSLTIPITQGATP 145
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A4P5RV71_9ACTN (LysM domain-containing protein n=5 Tax=root TaxID=1 RepID=A0A4P5RV71_9ACTN) HSP 1 Score: 53.1 bits (126), Expect = 3.370e-7 Identity = 31/66 (46.97%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 4 IAETTTTAPPPTTQLN------YVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIP 183
IA TTTT PP TT Y+VQSGDS+S IAS+F +S ++ N ++D + I GQ+L IP
Sbjct: 27 IAVTTTTIPPTTTLAPDTEYQMYLVQSGDSVSYIASQFNVSVGDIVALNGLADADDIQAGQKLKIP 92
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A6L6BPW0_9ACTN (LysM peptidoglycan-binding domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A6L6BPW0_9ACTN) HSP 1 Score: 53.1 bits (126), Expect = 4.050e-7 Identity = 30/66 (45.45%), Postives = 42/66 (63.64%), Query Frame = 1
Query: 4 IAETTTTAPPPTTQL------NYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIP 183
IA TTTT PP +T Y+VQSGDS+S IAS+F +S +++ N ++D + I GQ+L IP
Sbjct: 36 IAVTTTTIPPTSTLAPDTEYQTYLVQSGDSVSYIASQFNVSVNDIVALNGLADADDIQAGQKLKIP 101
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A424YKE8_9FIRM (LysM peptidoglycan-binding domain-containing protein n=2 Tax=unclassified Halanaerobium TaxID=2641197 RepID=A0A424YKE8_9FIRM) HSP 1 Score: 54.7 bits (130), Expect = 6.560e-7 Identity = 30/50 (60.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 34 PTTQLNYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIP 183
P L YV+Q GD+LS IAS FGIST+EL NFN I+ SI +G+EL IP
Sbjct: 27 PNLTLVYVIQQGDTLSEIASDFGISTNELRNFNEINSNFSIKMGEELLIP 76
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: UPI00200D347A (phage tail tip lysozyme n=3 Tax=Lactobacillaceae TaxID=33958 RepID=UPI00200D347A) HSP 1 Score: 54.3 bits (129), Expect = 9.820e-7 Identity = 25/46 (54.35%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 43 QLNYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSI 180
+++Y VQSGD+LS IA+RFG+S +L+++N ISD N I +GQ LS+
Sbjct: 332 KVSYTVQSGDTLSGIAARFGVSVSQLSSWNGISDPNKIYIGQVLSV 377
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A2M8PDG2_9CHLR (Uncharacterized protein n=2 Tax=Chloroflexi TaxID=200795 RepID=A0A2M8PDG2_9CHLR) HSP 1 Score: 53.1 bits (126), Expect = 1.490e-6 Identity = 29/56 (51.79%), Postives = 38/56 (67.86%), Query Frame = 1
Query: 49 NYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIPPTTVATPESTT 216
+Y VQ GD+L++IA+RFG + + + N ISD N I VGQ LSIP TT A S+T
Sbjct: 107 SYTVQRGDTLALIAARFGTTVAAILSVNGISDPNRIFVGQRLSIPRTTAAPVVSST 162
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A2M8P4Y6_9CHLR (Uncharacterized protein n=1 Tax=Phototrophicales bacterium TaxID=2364211 RepID=A0A2M8P4Y6_9CHLR) HSP 1 Score: 53.5 bits (127), Expect = 1.820e-6 Identity = 25/52 (48.08%), Postives = 35/52 (67.31%), Query Frame = 1
Query: 28 PPPTTQLNYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIP 183
PPPTT ++Y +Q G++L +IA R+G+S LA N I D N I+ GQ + IP
Sbjct: 190 PPPTTNISYTIQPGETLGMIAQRYGMSWTTLAQMNGIYDPNRILAGQTIVIP 241
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A419EHL5_9CHLR (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A419EHL5_9CHLR) HSP 1 Score: 53.5 bits (127), Expect = 1.850e-6 Identity = 26/44 (59.09%), Postives = 33/44 (75.00%), Query Frame = 1
Query: 52 YVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIP 183
Y+VQSGDSLS IASRF +S +EL + N I+D N + GQ+L IP
Sbjct: 40 YIVQSGDSLSSIASRFNVSMNELMSTNGITDPNQLTAGQQLIIP 83
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Match: A0A1T0CKF9_9GAMM (Uncharacterized protein n=1 Tax=Moraxella lincolnii TaxID=90241 RepID=A0A1T0CKF9_9GAMM) HSP 1 Score: 53.1 bits (126), Expect = 2.420e-6 Identity = 25/51 (49.02%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 49 NYVVQSGDSLSVIASRFGISTDELANFNAISDVNSIVVGQELSIPPTTVAT 201
+YV++SGD+LS++A+R+G+S +LAN N IS IV GQ+L +P T + T
Sbjct: 127 SYVIKSGDNLSMLANRYGVSVAQLANLNRISPQTIIVAGQKLVVPTTPINT 177 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121946.4507.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121946.4507.1 >prot_M-pyrifera_M_contig121946.4507.1 ID=prot_M-pyrifera_M_contig121946.4507.1|Name=mRNA_M-pyrifera_M_contig121946.4507.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=77bp PIAETTTTAPPPTTQLNYVVQSGDSLSVIASRFGISTDELANFNAISDVNback to top mRNA from alignment at M-pyrifera_M_contig121946:77..307- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121946.4507.1 ID=mRNA_M-pyrifera_M_contig121946.4507.1|Name=mRNA_M-pyrifera_M_contig121946.4507.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=231bp|location=Sequence derived from alignment at M-pyrifera_M_contig121946:77..307- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121946:77..307- >mRNA_M-pyrifera_M_contig121946.4507.1 ID=mRNA_M-pyrifera_M_contig121946.4507.1|Name=mRNA_M-pyrifera_M_contig121946.4507.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig121946:77..307- (Macrocystis pyrifera P11B4 male)back to top |