mRNA_M-pyrifera_M_contig121847.4495.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A517WBP6_9PLAN (Outer membrane biogenesis protein BamB n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WBP6_9PLAN) HSP 1 Score: 323 bits (828), Expect = 1.950e-99 Identity = 171/176 (97.16%), Postives = 173/176 (98.30%), Query Frame = 1
Query: 1 GRIISLGLWQIDAFPQAEAMLASLPDKQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 528
GRIISLGLWQIDAFPQAE+MLASLPD QQSLSPQQKQIDQLLKAELELALGNL GAQRRLESLLS+QAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKL SLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD
Sbjct: 793 GRIISLGLWQIDAFPQAESMLASLPDNQQSLSPQQKQIDQLLKAELELALGNLNGAQRRLESLLSNQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLESLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 968
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A518A542_9PLAN (Outer membrane biogenesis protein BamB n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A542_9PLAN) HSP 1 Score: 284 bits (726), Expect = 1.600e-85 Identity = 151/176 (85.80%), Postives = 162/176 (92.05%), Query Frame = 1
Query: 1 GRIISLGLWQIDAFPQAEAMLASLPDKQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 528
GRIIS+GLWQID+FPQAEAMLASLP K SL+ +QKQ DQLLKAELELALGNLTGAQ RLESLLS +A PD+Q+RS ALLRELLYAELNR ++E ELLGKL +LA TPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRI+DKAD
Sbjct: 793 GRIISVGLWQIDSFPQAEAMLASLPGKAPSLNSKQKQADQLLKAELELALGNLTGAQHRLESLLSVKADPDVQDRSEALLRELLYAELNRSHKNEFELLGKLETLAHTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRISDKAD 968
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A517RED6_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RED6_9PLAN) HSP 1 Score: 224 bits (571), Expect = 1.240e-64 Identity = 121/177 (68.36%), Postives = 151/177 (85.31%), Query Frame = 1
Query: 1 GRIISLGLWQIDAFPQAEAMLASLPD-KQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 528
G+IISLGLWQID+F QAEAM ASL + K+QS++ +Q Q DQLLKAEL+LALGNL+ AQ++LE+LLS A I+ RS +LLRELLYAELN Q+E +LL KL +LA TPLERGRFLSRKS+YLL Q+DY GLM+VAE+F+KIEV+QPLAMAGDT+HLVTV+SLI+GLM+++ KA+
Sbjct: 791 GQIISLGLWQIDSFAQAEAMRASLAETKKQSINSEQAQSDQLLKAELDLALGNLSSAQQKLEALLSMNAKAPIKKRSESLLRELLYAELNHTEQNEYDLLAKLEALATTPLERGRFLSRKSRYLLQQQDYQGLMEVAEEFQKIEVDQPLAMAGDTNHLVTVKSLISGLMEKVTTKAN 967
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A517VYW1_9PLAN (Outer membrane protein assembly factor BamB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VYW1_9PLAN) HSP 1 Score: 224 bits (570), Expect = 1.690e-64 Identity = 115/176 (65.34%), Postives = 149/176 (84.66%), Query Frame = 1
Query: 1 GRIISLGLWQIDAFPQAEAMLASLP-DKQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKA 525
G IIS+GLWQID+F QAE MLASLP D+++SL+ + Q +QL+KAELEL+LGNL A+R+LE+L+S Q+V ++ RS +LLRELLYAELN Q+E ++L K+ LA TPLERGRFLSRKSKYLL+Q+DY GLM++AE+FKKI+V QPLAMAGDT+HLVTV+SLI+GLM+++ KA
Sbjct: 793 GHIISIGLWQIDSFAQAETMLASLPQDQERSLNSAKAQSNQLIKAELELSLGNLENAKRKLEALISVQSVSPVKERSESLLRELLYAELNESNQNEFQILAKIEDLASTPLERGRFLSRKSKYLLEQQDYQGLMEIAEEFKKIDVEQPLAMAGDTNHLVTVKSLISGLMEKVTQKA 968
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A518IBC8_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IBC8_9PLAN) HSP 1 Score: 221 bits (564), Expect = 1.080e-63 Identity = 121/177 (68.36%), Postives = 146/177 (82.49%), Query Frame = 1
Query: 1 GRIISLGLWQIDAFPQAEAMLASLPD-KQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 528
G+IISLGLWQID+F QAEAM +SL + Q L+ Q Q DQLLKAEL+LALGNLT AQ +LE+LL+ ++ IQ RS +LLRELLYAELN Q+E +LL KL +LA TPLERGRFLSRKSKYLL QEDY LM+VAE+F+KIEVNQPLAMAGDT+HLVTV+SLI+GLM+++ KA+
Sbjct: 790 GQIISLGLWQIDSFSQAEAMRSSLATTRNQPLNSAQAQSDQLLKAELDLALGNLTSAQLKLEALLAVKSTESIQKRSESLLRELLYAELNHTDQNEYDLLAKLEALATTPLERGRFLSRKSKYLLQQEDYQALMEVAEEFQKIEVNQPLAMAGDTNHLVTVKSLISGLMEKVTTKAN 966
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A350KH13_9PLAN (Uncharacterized protein n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A350KH13_9PLAN) HSP 1 Score: 215 bits (547), Expect = 2.100e-61 Identity = 117/176 (66.48%), Postives = 140/176 (79.55%), Query Frame = 1
Query: 4 RIISLGLWQIDAFPQAEAMLASLPD-KQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 528
++ISLGLWQIDAFPQAEAML SLP QSL+ Q Q +QLLKAELELALGNL AQ RLE+LLS ++++RS +LLRELLYAELN+ Q E ++L KL LA TP ERGR+LSRKS+YLL+QE+Y LM VAE+FK I+V QPLAMAGDT HLVT +SLIAGLM+++ KAD
Sbjct: 790 KVISLGLWQIDAFPQAEAMLTSLPQIDHQSLNSPQNQGNQLLKAELELALGNLNSAQHRLETLLSIPTAANVKSRSESLLRELLYAELNQSTQDEFQILAKLERLATTPQERGRYLSRKSRYLLEQENYQALMDVAEEFKNIDVIQPLAMAGDTDHLVTTKSLIAGLMEKVTAKAD 965
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A355G7V4_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A355G7V4_9PLAN) HSP 1 Score: 205 bits (521), Expect = 5.590e-58 Identity = 112/177 (63.28%), Postives = 135/177 (76.27%), Query Frame = 1
Query: 1 GRIISLGLWQIDAFPQAEAMLASLPD-KQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 528
G++ISLGLWQIDAFPQAEAML SLP QQ+L+ Q Q DQLLKAELELALG LLS ++++RS +LLRELLYAELN+ Q E +L KL LA +P ERGR+LSRKSKYLL+QE+Y LM++AE+FKKIEV QPLAMAGDT HLVT +SL+AGLM+++ KAD
Sbjct: 338 GKLISLGLWQIDAFPQAEAMLTSLPQLDQQNLNSPQHQSDQLLKAELELALGXXXXXXXXXXXLLSISTTANVKSRSESLLRELLYAELNQSTQDEFLILAKLERLATSPQERGRYLSRKSKYLLEQENYQALMEIAEEFKKIEVQQPLAMAGDTDHLVTTKSLVAGLMEKVTAKAD 514
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A2E2C9Z5_9PLAN (Uncharacterized protein n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C9Z5_9PLAN) HSP 1 Score: 205 bits (521), Expect = 6.580e-58 Identity = 112/177 (63.28%), Postives = 135/177 (76.27%), Query Frame = 1
Query: 1 GRIISLGLWQIDAFPQAEAMLASLPD-KQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADKAD 528
G++ISLGLWQIDAFPQAEAML SLP QQ+L+ Q Q DQLLKAELELALG LLS ++++RS +LLRELLYAELN+ Q E +L KL LA +P ERGR+LSRKSKYLL+QE+Y LM++AE+FKKIEV QPLAMAGDT HLVT +SL+AGLM+++ KAD
Sbjct: 793 GKLISLGLWQIDAFPQAEAMLTSLPQLDQQNLNSPQHQSDQLLKAELELALGXXXXXXXXXXXLLSISTTANVKSRSESLLRELLYAELNQSTQDEFLILAKLERLATSPQERGRYLSRKSKYLLEQENYQALMEIAEEFKKIEVQQPLAMAGDTDHLVTTKSLVAGLMEKVTAKAD 969
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: A0A2D6SXL9_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SXL9_9PLAN) HSP 1 Score: 81.6 bits (200), Expect = 8.530e-15 Identity = 53/172 (30.81%), Postives = 91/172 (52.91%), Query Frame = 1
Query: 7 IISLGLWQIDAFPQAEAMLASLPDKQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAEDFKKIEVNQPLAMAGDTHHLVTVQSLIAGLMQRIADK 522
IIS+G + + AFPQ+E +LA + + +I L AELEL LG L A RLE +L+ + ++ LLRELL+ +L+ + L +L L+ T +R R+L + +++ +Q D+ G++Q ++F +++ + M D H V+ S I + R D+
Sbjct: 757 IISMGPFNVAAFPQSELLLARTTESLRQNPNSAAEI--LTVAELELTLGRLDQADARLERVLARALDEGQRRQAETLLRELLFLKLSSDPEVAGTSLARLDRLSHTASQRARYLMQAARWQQEQRDFAGILQSTKEFARLDHESLMPMPDDAAHFVSAASWIPAALARARDE 926
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Match: D5SNQ3_PLAL2 (Uncharacterized protein n=4 Tax=Planctopirus TaxID=1649480 RepID=D5SNQ3_PLAL2) HSP 1 Score: 55.5 bits (132), Expect = 9.470e-6 Identity = 43/135 (31.85%), Postives = 67/135 (49.63%), Query Frame = 1
Query: 7 IISLGLWQIDAFPQAEAMLASLPDKQQSLSPQQKQIDQLLKAELELALGNLTGAQRRLESLLSDQAVPDIQNRSTALLRELLYAELNRGGQSEAELLGKLASLAQTPLERGRFLSRKSKYLLDQEDYHGLMQVAE 411
++S+GL ++ AFPQA+A L++L + Q + D L +AELE LG + + L + R+ LLR L +L G +S E+L L LA +P +R ++ SK LD+ D L Q +
Sbjct: 717 VLSIGLKEVKAFPQAQARLSALDRESQEAVSNNAERD-LERAELEAVLGRADRVEAAVMLALRGSLSTASRERAQRLLRSTLSQQLYEGKRSSKEILALLRPLALSPSDRLHDVAWLSKISLDEGDRQTLEQALD 850 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121847.4495.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121847.4495.1 >prot_M-pyrifera_M_contig121847.4495.1 ID=prot_M-pyrifera_M_contig121847.4495.1|Name=mRNA_M-pyrifera_M_contig121847.4495.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp GRIISLGLWQIDAFPQAEAMLASLPDKQQSLSPQQKQIDQLLKAELELALback to top mRNA from alignment at M-pyrifera_M_contig121847:3..530- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121847.4495.1 ID=mRNA_M-pyrifera_M_contig121847.4495.1|Name=mRNA_M-pyrifera_M_contig121847.4495.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=528bp|location=Sequence derived from alignment at M-pyrifera_M_contig121847:3..530- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121847:3..530- >mRNA_M-pyrifera_M_contig121847.4495.1 ID=mRNA_M-pyrifera_M_contig121847.4495.1|Name=mRNA_M-pyrifera_M_contig121847.4495.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1056bp|location=Sequence derived from alignment at M-pyrifera_M_contig121847:3..530- (Macrocystis pyrifera P11B4 male)back to top |