mRNA_M-pyrifera_M_contig121808.4487.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A517WDH7_9PLAN (Large cysteine-rich periplasmic protein OmcB n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517WDH7_9PLAN) HSP 1 Score: 343 bits (879), Expect = 1.100e-109 Identity = 175/177 (98.87%), Postives = 176/177 (99.44%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNG+FDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR MVFVSAKGPARYKQ
Sbjct: 707 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGQFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPREMVFVSAKGPARYKQ 883
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A518A6U7_9PLAN (Large cysteine-rich periplasmic protein OmcB n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A6U7_9PLAN) HSP 1 Score: 322 bits (824), Expect = 9.310e-102 Identity = 160/177 (90.40%), Postives = 169/177 (95.48%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
EFLITRKGPKNRYLGR+G YEN I NNTEQ IKNISIFES+PPGMKF+SASG G+FD VRRVVQWDIAELAGGMQQV ++ELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVN+IGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIP+ MVFV+AKGPARYKQ
Sbjct: 688 EFLITRKGPKNRYLGRAGVYENTIANNTEQAIKNISIFESVPPGMKFISASGKGQFDTVRRVVQWDIAELAGGMQQVFSVELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNIIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPQEMVFVAAKGPARYKQ 864
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A517RG88_9PLAN (Large cysteine-rich periplasmic protein OmcB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RG88_9PLAN) HSP 1 Score: 280 bits (717), Expect = 3.840e-86 Identity = 137/177 (77.40%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
+FL+TRKGPKNRYLGRSG YEN I NNTE+ I+NIS+FES+PPGMKFV+AS NG+FD VR VVQWDI ELA Q+VL +ELEP EVGK +STVQVVT NN+K+SANLQSEV VIGQPLLKVETSELKGPLEVGEKM++Q+QLVNQGSA A NVEFRVKIP +VF++AKGP RYKQ
Sbjct: 689 QFLLTRKGPKNRYLGRSGVYENTIANNTEKPIQNISVFESVPPGMKFVTASANGQFDTVRNVVQWDIPELAASEQRVLTVELEPIEVGKLISTVQVVTDNNTKYSANLQSEVTVIGQPLLKVETSELKGPLEVGEKMAMQIQLVNQGSASATNVEFRVKIPNELVFLAAKGPVRYKQ 865
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A517V7K4_9PLAN (Large cysteine-rich periplasmic protein OmcB n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517V7K4_9PLAN) HSP 1 Score: 279 bits (714), Expect = 7.860e-86 Identity = 135/177 (76.27%), Postives = 157/177 (88.70%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
+FL+TRKGPKNRYLG G YEN+ITNNTE+TI+NISIFESIPPGMKF+SAS NGKFD +R+VVQWD+ EL G Q L +ELEPTEVGK +ST+QVVT NN++FSANLQSE VIGQPLLKVETSELKGPLEVGEKM++QVQL+NQGSA A NVEFR+KIP+ +VFV+AKGP RY+Q
Sbjct: 670 QFLLTRKGPKNRYLGSKGEYENSITNNTEKTIENISIFESIPPGMKFLSASANGKFDQIRKVVQWDLKELPAGSTQALKVELEPTEVGKMISTLQVVTDNNTQFSANLQSETVVIGQPLLKVETSELKGPLEVGEKMAMQVQLINQGSASATNVEFRIKIPQELVFVAAKGPGRYQQ 846
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A518ID11_9PLAN (Large cysteine-rich periplasmic protein OmcB n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518ID11_9PLAN) HSP 1 Score: 279 bits (714), Expect = 1.040e-85 Identity = 136/177 (76.84%), Postives = 157/177 (88.70%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
+FL+TRKGPKNRYLGRSG YEN I NNTE+ I+NIS+FES+PPGMKF++AS NG+FD VR VVQWDI+ELA Q+VL IELEP EVGK +STVQVVT NN+K+SANLQSEV VIGQPLLKVETSELKGPLEVGEKM++Q+QLVNQGSA A +VEFRVKIP +VF++AKGP RYKQ
Sbjct: 689 QFLLTRKGPKNRYLGRSGVYENTIANNTERPIQNISVFESVPPGMKFITASANGQFDTVRNVVQWDISELAASEQRVLTIELEPIEVGKLISTVQVVTDNNTKYSANLQSEVTVIGQPLLKVETSELKGPLEVGEKMAMQIQLVNQGSASATHVEFRVKIPNELVFLAAKGPVRYKQ 865
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A2E2C8T9_9PLAN (Uncharacterized protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C8T9_9PLAN) HSP 1 Score: 277 bits (709), Expect = 4.180e-85 Identity = 134/177 (75.71%), Postives = 158/177 (89.27%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
+FL+TRKGPKNRYLG G YEN+ITNNTE+TI+NISIFESIPPGMKF+SAS NGK+D VR VVQWD+ ELA G Q+L+IELEPTEVGKK+ST+QVVT NN++FSANLQSE V+GQ LLKVETSEL GPLEVGEKM++Q+QL+NQGSA A NVEFR+KIP+ +VFV+AKGP RY+Q
Sbjct: 670 QFLLTRKGPKNRYLGSKGEYENSITNNTEKTIENISIFESIPPGMKFLSASENGKYDQVRNVVQWDLIELAAGSTQILSIELEPTEVGKKISTLQVVTDNNTQFSANLQSETVVVGQSLLKVETSELTGPLEVGEKMAMQIQLINQGSASATNVEFRIKIPKELVFVAAKGPGRYQQ 846
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A517XC32_9PLAN (Large cysteine-rich periplasmic protein OmcB n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517XC32_9PLAN) HSP 1 Score: 274 bits (701), Expect = 6.040e-84 Identity = 134/177 (75.71%), Postives = 155/177 (87.57%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
+F++ RKGPKNRYLG G YEN+ITNNTE++I+NISIFESIPPGMKF+SAS NGK+D VR VVQWD+ ELA G Q L IELEP E+GKK+ST+QVVT NN++FSANLQSE VIGQPLLKVETSELKGPLEVGEKM++QVQL NQGSA A NVEFRVKIP+ +VFV+AKGP RY+Q
Sbjct: 670 QFILARKGPKNRYLGSKGEYENSITNNTEKSIQNISIFESIPPGMKFLSASENGKYDQVRNVVQWDLKELAAGHTQTLKIELEPNEIGKKISTLQVVTDNNTQFSANLQSETVVIGQPLLKVETSELKGPLEVGEKMAMQVQLTNQGSASATNVEFRVKIPKELVFVAAKGPGRYQQ 846
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A517VX13_9PLAN (Large cysteine-rich periplasmic protein OmcB n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VX13_9PLAN) HSP 1 Score: 272 bits (695), Expect = 5.080e-83 Identity = 132/177 (74.58%), Postives = 156/177 (88.14%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
+ L+TRKGPKNRYLGRS YEN ITNN+EQ I+NIS+FESIPPGMKF+SAS NG+FDPVR+VVQWDI EL QQ+L+IELEPT VGK +STVQVV N+SKF+ NLQSE ++GQPLLKVETSELKGPLEVGEKM++QVQL+NQGSA A NVEFRVKIP+ ++F+SAKGPA+Y+Q
Sbjct: 679 KILLTRKGPKNRYLGRSAQYENVITNNSEQPIQNISVFESIPPGMKFISASANGQFDPVRKVVQWDILELPASDQQMLSIELEPTTVGKALSTVQVVIDNSSKFAVNLQSETTILGQPLLKVETSELKGPLEVGEKMAMQVQLLNQGSASATNVEFRVKIPQELMFLSAKGPAKYRQ 855
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: UPI000299D1DB (DUF11 domain-containing protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI000299D1DB) HSP 1 Score: 120 bits (300), Expect = 3.260e-28 Identity = 64/176 (36.36%), Postives = 102/176 (57.95%), Query Frame = 1
Query: 4 FLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKVETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSAKGPARYKQ 531
++TR G Y+ RS + N + N+ Q + I E +P GM+F +AS GKFDP R V W + LA G + + ++ P E G S + TGN +A + + V VIG+P L++ET G + VGE+++ + QL N G+A ANNV+ R+++P + ++A+G A+Y+Q
Sbjct: 629 LVLTRSGHNQLYVERSAIFTNNVRNDGNQRADRVKISEVVPAGMQFETASDGGKFDPQARAVVWTLGPLAPGSDRSVTVKYMPKETGTLASNI-TATGNLGS-TATVNASVKVIGKPELQMETHSATGSVTVGERITSRFQLNNSGTASANNVQLRIRLPAELRLITARG-AKYRQ 801
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Match: A0A3L7S1D1_9BACT (DUF11 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7S1D1_9BACT) HSP 1 Score: 115 bits (288), Expect = 1.350e-26 Identity = 62/171 (36.26%), Postives = 99/171 (57.89%), Query Frame = 1
Query: 1 EFLITRKGPKNRYLGRSGAYENAITNNTEQTIKNISIFESIPPGMKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVQVVTGNNSKFSANLQSEVNVIGQPLLKV--ETSELKGPLEVGEKMSLQVQLVNQGSAPANNVEFRVKIPR*MVFVSA 507
+ + R GP+ RY+GRS Y+N +TN+++ N ++ E +P G++FVSASG G ++P R +QW + +LA G Q VL +EL E G+ + V+V N+ F L VI + L V + S P++VGE+ V + N+G+A A NVE V++P + ++A
Sbjct: 704 QLTLERLGPERRYVGRSATYQNIVTNDSKFEAINATVVEEVPQGLRFVSASGGGVYNPDNRRIQWSVPKLAAGKQLVLEVELIAEEAGQMETIVEVT--ENAGFRTPLTENTIVIVEDLHNVTADISRQDEPVQVGERFGFTVTIDNRGTAVARNVEMSVQVPTELKVLAA 872 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121808.4487.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121808.4487.1 >prot_M-pyrifera_M_contig121808.4487.1 ID=prot_M-pyrifera_M_contig121808.4487.1|Name=mRNA_M-pyrifera_M_contig121808.4487.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp MKFVSASGNGKFDPVRRVVQWDIAELAGGMQQVLNIELEPTEVGKKVSTVback to top mRNA from alignment at M-pyrifera_M_contig121808:1..531- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121808.4487.1 ID=mRNA_M-pyrifera_M_contig121808.4487.1|Name=mRNA_M-pyrifera_M_contig121808.4487.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=531bp|location=Sequence derived from alignment at M-pyrifera_M_contig121808:1..531- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121808:1..531- >mRNA_M-pyrifera_M_contig121808.4487.1 ID=mRNA_M-pyrifera_M_contig121808.4487.1|Name=mRNA_M-pyrifera_M_contig121808.4487.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=714bp|location=Sequence derived from alignment at M-pyrifera_M_contig121808:1..531- (Macrocystis pyrifera P11B4 male)back to top |