mRNA_M-pyrifera_M_contig121745.4466.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: UPI001E8E5CDB (mPR-like GPCR protein n=1 Tax=Emericellopsis atlantica TaxID=2614577 RepID=UPI001E8E5CDB) HSP 1 Score: 61.2 bits (147), Expect = 8.450e-9 Identity = 28/103 (27.18%), Postives = 54/103 (52.43%), Query Frame = 1
Query: 13 SSAFHIFHAMGVRQYRFFAKCDYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPHGLLVF 321
S+A+H + + DY+ I + + G +V ++ S+YC PR Q +Y A++ V + +++ ++S E R++R+ +F GF A I H + +F
Sbjct: 111 SAAYHTLLCHSEHYSNLWVRLDYAAIVIQILGSFVSGIYVSFYCEPRLQVIYWAMILVLGTIAGYINLSPGMQSPEWRSVRLASFVVTGFSAFAPIAHAVAIF 213
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: A0A0N5A1T8_PARTI (Uncharacterized protein n=1 Tax=Parastrongyloides trichosuri TaxID=131310 RepID=A0A0N5A1T8_PARTI) HSP 1 Score: 61.2 bits (147), Expect = 1.090e-8 Identity = 31/102 (30.39%), Postives = 53/102 (51.96%), Query Frame = 1
Query: 13 SSAFHIFHAMGVRQYRFFAKCDYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPHGLLV 318
S+ FH+F + FFAK DYSGIAL + G ++P +++++ C LY ++ + +L +S +D + R++R F +G + H LLV
Sbjct: 175 SALFHLFLFKSQKFGNFFAKLDYSGIALLIIGSFIPWIYFTFMCHKHLVILYITMIVIMGILAIIVSLFDKFAEPKYRSLRAGVFLTMGLSAIVPGIHLLLV 276
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: A0A2B7ZC47_9EURO (Uncharacterized protein n=2 Tax=Emmonsia crescens TaxID=73230 RepID=A0A2B7ZC47_9EURO) HSP 1 Score: 57.4 bits (137), Expect = 2.300e-7 Identity = 27/84 (32.14%), Postives = 45/84 (53.57%), Query Frame = 1
Query: 76 DYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPHGLLVFDV 327
DY GI +AG ++P V+Y +YCLP+ Q +Y A++++ C +S + R R F ++G V + HG+ +F V
Sbjct: 162 DYIGIVGLIAGSFIPSVYYGFYCLPKFQKVYWAMISLIGTGCAVVSIMPRFRTPAWRPFRAGMFVSMGLSAVFPVLHGVSIFGV 245
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: A0A1I8CDA8_9BILA (Uncharacterized protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CDA8_9BILA) HSP 1 Score: 57.0 bits (136), Expect = 3.370e-7 Identity = 29/98 (29.59%), Postives = 47/98 (47.96%), Query Frame = 1
Query: 13 SSAFHIFHAMGVRQYRFFAKCDYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPH 306
S+AFH+ FFAK DYSGIAL + G ++P ++Y++ C P Y + V + +S ++ + R +R F +G V + H
Sbjct: 177 SAAFHLVFFKSKAVGAFFAKLDYSGIALLIIGSFIPWIYYAFNCWPSLIKFYMISIIVMGVAAIIVSLFEKFAQPKYRPLRAGIFLVMGLSAVVPVIH 274
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: A0A0D1ZFM2_EXOME (Uncharacterized protein n=2 Tax=Exophiala mesophila TaxID=212818 RepID=A0A0D1ZFM2_EXOME) HSP 1 Score: 54.3 bits (129), Expect = 2.760e-6 Identity = 27/88 (30.68%), Postives = 47/88 (53.41%), Query Frame = 1
Query: 58 RFFAKCDYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPHGLLVF 321
+F+ + DY+GIA+ +AG +VP V+Y ++C Q +Y ++++ L C +S + R R L F +G V + GL +F
Sbjct: 140 KFWNQLDYAGIAILIAGSFVPSVYYGFWCDGPRQVVYWTMISLLGLACTAVSVLPQFRTPAWRPYRALMFIGMGVSAVFPVFDGLRLF 227
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: M2SF56_COCSN (Uncharacterized protein n=7 Tax=Bipolaris TaxID=33194 RepID=M2SF56_COCSN) HSP 1 Score: 52.8 bits (125), Expect = 9.490e-6 Identity = 25/103 (24.27%), Postives = 50/103 (48.54%), Query Frame = 1
Query: 13 SSAFHIFHAMGVRQYRFFAKCDYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPHGLLVF 321
S+A+H + + DY GI + + G ++P +++++YC PR Q +Y A++ L + ++ + + +R+ F A+G A I H +F
Sbjct: 115 SAAYHTLICHSHAFAELWVRLDYVGIVVQIVGSFIPGIYFAFYCEPRLQKVYWAMIITLGTLTATIVLSPGLQGPKWKYLRLSTFVAMGLSAFAPIIHAASIF 217
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: A0A507F6J2_9FUNG (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507F6J2_9FUNG) HSP 1 Score: 52.8 bits (125), Expect = 1.050e-5 Identity = 25/100 (25.00%), Postives = 49/100 (49.00%), Query Frame = 1
Query: 13 SSAFHIFHAMGVRQYRFFAKCDYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPHGL 312
S+ FH+ + + DY GI + G +VP ++Y ++C P+ QA+Y A++ + ++ ++ + R +R F ++G GV + H L
Sbjct: 183 STTFHLCCCHSRNVAAVWLRGDYVGIVTLIMGSFVPSIYYGFFCSPKLQAVYLAVIVIFGIVTICITVSPKFFAPRYRLLRTGLFVSMGLTGVVPLIHAL 282
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Match: A0A024TZ90_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TZ90_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 2.560e-5 Identity = 29/101 (28.71%), Postives = 49/101 (48.51%), Query Frame = 1
Query: 4 FCGSSAFHIFHAMGVRQYRFFAKCDYSGIALAVAGIYVPVVFYSWYCLPRAQALYGALVAVASLLCYWMSFWDSIESQEKRTMRVLAFTALGFVGVAMIPH 306
F S+ +H+ + +F + DY+GI + +AG +VP+V YS+YC P Y ++V + + SF S ++ +R F AL G + H
Sbjct: 149 FTCSAVYHLLYIQSRAWCDWFTQVDYAGIIVLIAGAFVPLVSYSFYCKPDVVVAYLSVVGMLATASLVASFAPSFQAHPH--IRTAVFLALAGFGSVPVMH 247 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121745.4466.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121745.4466.1 >prot_M-pyrifera_M_contig121745.4466.1 ID=prot_M-pyrifera_M_contig121745.4466.1|Name=mRNA_M-pyrifera_M_contig121745.4466.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp LFCGSSAFHIFHAMGVRQYRFFAKCDYSGIALAVAGIYVPVVFYSWYCLPback to top mRNA from alignment at M-pyrifera_M_contig121745:13..339+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121745.4466.1 ID=mRNA_M-pyrifera_M_contig121745.4466.1|Name=mRNA_M-pyrifera_M_contig121745.4466.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=327bp|location=Sequence derived from alignment at M-pyrifera_M_contig121745:13..339+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121745:13..339+ >mRNA_M-pyrifera_M_contig121745.4466.1 ID=mRNA_M-pyrifera_M_contig121745.4466.1|Name=mRNA_M-pyrifera_M_contig121745.4466.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=654bp|location=Sequence derived from alignment at M-pyrifera_M_contig121745:13..339+ (Macrocystis pyrifera P11B4 male)back to top |