mRNA_M-pyrifera_M_contig121730.4462.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A6H5JAG5_9PHAE (PROTEASOME_ALPHA_1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAG5_9PHAE) HSP 1 Score: 94.7 bits (234), Expect = 7.900e-24 Identity = 47/67 (70.15%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 1 QGRMFQVEYAMEATRRGRTVVGVCGDGCVALVTRDPPQPQPQPSCRAV-KDRGVWEVDCHVGVAASG 198
+GR++QVEYAMEATRRGRTV+GVCG GCVALVTRDP P SCRA +GVW VD HVG+AA G
Sbjct: 39 KGRIYQVEYAMEATRRGRTVLGVCGGGCVALVTRDPSPPTS--SCRAAGPHKGVWAVDTHVGIAACG 103
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A662J1B8_9CREN (Proteasome subunit alpha n=2 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662J1B8_9CREN) HSP 1 Score: 55.8 bits (133), Expect = 1.270e-7 Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 4 GRMFQVEYAMEATRRGRTVVGV-CGDGCVALVTRDPPQPQPQPSCRAVKDRGVWEVDCHVGVAASG 198
GR+FQVEYA+EA RRG T +GV C +G V V + P PS +W++D HVGVA +G
Sbjct: 20 GRLFQVEYALEAVRRGWTTLGVRCPEGAVLAVEKKRILPLVDPSSM----EKIWKIDEHVGVAYAG 81
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A7C4JD40_9ARCH (Proteasome subunit alpha n=3 Tax=TACK group TaxID=1783275 RepID=A0A7C4JD40_9ARCH) HSP 1 Score: 55.1 bits (131), Expect = 2.510e-7 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 1 QGRMFQVEYAMEATRRGRTVVGV-CGDGCVALVTRDPPQPQPQPSCRAVKDRGVWEVDCHVGVAASG 198
+GR++QVEYA+EA +RG T +G+ C DG V V + P P +W+VD HVG+A +G
Sbjct: 19 EGRLYQVEYALEAVKRGWTTLGIKCKDGVVVAVEKKRISPLVDPETM----EKIWKVDDHVGIAYAG 81
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A7C2WB74_9ARCH (Proteasome subunit alpha n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7C2WB74_9ARCH) HSP 1 Score: 55.1 bits (131), Expect = 2.510e-7 Identity = 28/67 (41.79%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 1 QGRMFQVEYAMEATRRGRTVVGV-CGDGCVALVTRDPPQPQPQPSCRAVKDRGVWEVDCHVGVAASG 198
+GR++QVEYA+EA +RG T +G+ C DG V V + P P +W+VD HVG+A +G
Sbjct: 19 EGRLYQVEYALEAVKRGWTTLGIRCRDGVVVAVEKKRISPLVDPETM----EKIWKVDDHVGIAYAG 81
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A7J3XWC6_9ARCH (Proteasome subunit alpha n=1 Tax=Candidatus Bathyarchaeota archaeon TaxID=2026714 RepID=A0A7J3XWC6_9ARCH) HSP 1 Score: 54.7 bits (130), Expect = 3.390e-7 Identity = 30/66 (45.45%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 4 GRMFQVEYAMEATRRGRTVVGV-CGDGCVALVTRDPPQPQPQPSCRAVKDRGVWEVDCHVGVAASG 198
GR+FQVEYA+EA RRG T +GV C +G V V + P PS +W++D H+GVA +G
Sbjct: 20 GRLFQVEYALEAVRRGWTTLGVRCPEGVVLGVEKKKVVPLVDPSSM----EKIWKIDEHIGVAYAG 81
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A226EMH8_FOLCA (Proteasome subunit alpha type n=2 Tax=Entomobryomorpha TaxID=730330 RepID=A0A226EMH8_FOLCA) HSP 1 Score: 54.7 bits (130), Expect = 3.450e-7 Identity = 30/67 (44.78%), Postives = 42/67 (62.69%), Query Frame = 1
Query: 1 QGRMFQVEYAMEATRRGRTVVGVC-GDGCVALVTRDPPQPQPQPSCRAVKDRGVWEVDCHVGVAASG 198
+GR+FQVEYA+EA + G TV+G+C +G V +V + P +PS + EVD H+GVA SG
Sbjct: 18 EGRIFQVEYAIEAIKLGSTVIGICTSEGVVLVVEKRITSPLMEPSTI----EKIAEVDKHIGVACSG 80
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A7J2J669_9EURY (Proteasome subunit alpha n=2 Tax=Euryarchaeota TaxID=28890 RepID=A0A7J2J669_9EURY) HSP 1 Score: 54.7 bits (130), Expect = 3.450e-7 Identity = 28/69 (40.58%), Postives = 43/69 (62.32%), Query Frame = 1
Query: 4 GRMFQVEYAMEATRRGRTVVGV-CGDGCVALVTRDPPQPQPQPSCRAVKDRGV---WEVDCHVGVAASG 198
GR+FQV+YA EA +RG+T +G+ C DG V LV R + + R ++ R + +++D H+G A SG
Sbjct: 21 GRLFQVQYAQEAVKRGKTAIGIKCEDGIVLLVER-------KVTSRLIEPRSIEKIFQIDDHIGAATSG 82
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A662J627_9CREN (Proteasome subunit alpha n=1 Tax=Thermoprotei archaeon TaxID=2250277 RepID=A0A662J627_9CREN) HSP 1 Score: 54.7 bits (130), Expect = 3.480e-7 Identity = 27/67 (40.30%), Postives = 40/67 (59.70%), Query Frame = 1
Query: 1 QGRMFQVEYAMEATRRGRTVVGV-CGDGCVALVTRDPPQPQPQPSCRAVKDRGVWEVDCHVGVAASG 198
+GR++QVEYA+EA +RG T +G+ C DG V V + P P +W++D HVG+A +G
Sbjct: 19 EGRLYQVEYALEAVKRGWTTLGIKCKDGVVVAVEKKRISPLVDPDTM----EKIWKIDDHVGIAYAG 81
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: A0A151BA35_BATXB (Proteasome subunit alpha n=3 Tax=unclassified Candidatus Bathyarchaeota TaxID=1700837 RepID=A0A151BA35_BATXB) HSP 1 Score: 54.3 bits (129), Expect = 4.630e-7 Identity = 26/69 (37.68%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 1 QGRMFQVEYAMEATRRGRTVVGVCGDGCVALVTRDPPQPQPQPSCRAVKDRGVW---EVDCHVGVAASG 198
+GR++QVEYA+EA +RG ++VG+ C L + +P R + D W ++D HVGVA +G
Sbjct: 18 EGRLYQVEYAVEAVKRGASIVGLACKSCTVLAAEE------RPPSRLLDDNFTWKIFQIDDHVGVAIAG 80
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Match: PSA_METPE (Proteasome subunit alpha n=1 Tax=Methanosphaerula palustris (strain ATCC BAA-1556 / DSM 19958 / E1-9c) TaxID=521011 RepID=PSA_METPE) HSP 1 Score: 53.9 bits (128), Expect = 6.580e-7 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 4 GRMFQVEYAMEATRRGRTVVGV-CGDGCVALVTRDPPQPQPQPSCRAVKDRGVWEVDCHVGVAASG 198
GR++QVEYA EA +RG T VG+ C DG V LV + +PS ++++D H+GVA+SG
Sbjct: 20 GRLYQVEYAREAVKRGTTAVGIKCNDGIVLLVDKRVNSKLLEPS----SIEKIFKIDNHIGVASSG 81 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121730.4462.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121730.4462.1 >prot_M-pyrifera_M_contig121730.4462.1 ID=prot_M-pyrifera_M_contig121730.4462.1|Name=mRNA_M-pyrifera_M_contig121730.4462.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp MFQVEYAMEATRRGRTVVGVCGDGCVALVTRDPPQPQPQPSCRAVKDRGVback to top mRNA from alignment at M-pyrifera_M_contig121730:214..414+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121730.4462.1 ID=mRNA_M-pyrifera_M_contig121730.4462.1|Name=mRNA_M-pyrifera_M_contig121730.4462.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=201bp|location=Sequence derived from alignment at M-pyrifera_M_contig121730:214..414+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121730:214..414+ >mRNA_M-pyrifera_M_contig121730.4462.1 ID=mRNA_M-pyrifera_M_contig121730.4462.1|Name=mRNA_M-pyrifera_M_contig121730.4462.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig121730:214..414+ (Macrocystis pyrifera P11B4 male)back to top |