mRNA_M-pyrifera_M_contig121445.4413.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: UPI001C89EDF2 (TonB-dependent receptor n=1 Tax=Qipengyuania proteolytica TaxID=2867239 RepID=UPI001C89EDF2) HSP 1 Score: 229 bits (584), Expect = 5.580e-67 Identity = 118/172 (68.60%), Postives = 135/172 (78.49%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAG 516
IRALGVS L++VL E+APQ S QGRG E PV+LVNGRRI SFREIR YPPEAV RID+LPEEVAL YGY+A+QKVVNFVLRPRFNAITAE+ G T GG Q+ASVNYL +RQENRLS D EY R LLE++RDI++R+ F PGN+ + VSG EIDP LS LAG
Sbjct: 90 IRALGVSNLAEVLEELAPQIGSAQGRGGERPVVLVNGRRISSFREIRGYPPEAVVRIDILPEEVALTYGYSANQKVVNFVLRPRFNAITAEIRAGTTTDGGGGTQRASVNYLAVRQENRLSVDLEYKRDGGLLEADRDILARDRGAAFGTPGNVVA-VSGGEIDPALSALAG 260
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: UPI000564282F (TonB-dependent receptor plug domain-containing protein n=1 Tax=Rhizorhabdus wittichii TaxID=160791 RepID=UPI000564282F) HSP 1 Score: 200 bits (509), Expect = 1.770e-57 Identity = 100/174 (57.47%), Postives = 132/174 (75.86%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
IRALGV++++++L E+APQT SGQGRG E PV L+NGRRI FREIR P EA+ R+D+LPEEVALKYGY+ADQ+VVN VLR RF+AIT EL GG+ T+GG +A +N+L IR++ R++ + EY ++++ E+ER++ISR F GNIT +GAEIDP LS LAG P
Sbjct: 75 IRALGVNSVAELLEELAPQTRSGQGRGGEQPVTLLNGRRISGFREIRDIPAEAIERVDILPEEVALKYGYSADQRVVNIVLRRRFHAITGELEGGMATRGGGESGQAELNFLRIRRDQRVNLNIEYQGAAAITEAERNLISRGGGRAFDTAGNITGIPTGAEIDPALSALAGAP 248
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: UPI00190D5459 (hypothetical protein n=1 Tax=Escherichia coli TaxID=562 RepID=UPI00190D5459) HSP 1 Score: 184 bits (468), Expect = 1.350e-56 Identity = 96/176 (54.55%), Postives = 127/176 (72.16%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDP--GLSVLAGTP 522
IRA GVS+++++L E+ PQT SG+GRG PVIL+NGRRIGSF EIR P EA+ R+D+LPEEVAL YGY ADQ+VVNFVLRPRF + TAEL G + T GG ++ +A + ++I + R +FD EY R S LLESER+I++ P + F + GN+T + G IDP G + +AG P
Sbjct: 2 IRAYGVSSIAELLTELEPQTGSGRGRGGGRPVILLNGRRIGSFGEIRDLPTEAILRVDILPEEVALTYGYRADQRVVNFVLRPRFRSYTAELEGRVPTAGGTSNLEAELGMVSINRRGRENFDVEYERDSRLLESERNIVAAAPSSPFDLRGNVTG-IDGGAIDPALGAATIAGVP 176
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: UPI001BB775F2 (TonB-dependent receptor n=1 Tax=Rhizorhabdus wittichii TaxID=160791 RepID=UPI001BB775F2) HSP 1 Score: 200 bits (509), Expect = 1.560e-56 Identity = 100/174 (57.47%), Postives = 132/174 (75.86%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
IRALGV++++++L E+APQT SGQGRG E PV L+NGRRI FREIR P EA+ R+D+LPEEVALKYGY+ADQ+VVN VLR RF+AIT EL GG+ T+GG +A +N+L IR++ R++ + EY ++++ E+ER++ISR F GNIT +GAEIDP LS LAG P
Sbjct: 75 IRALGVNSVAELLEELAPQTRSGQGRGGEQPVTLLNGRRISGFREIRDIPAEAIERVDILPEEVALKYGYSADQRVVNIVLRRRFHAITGELEGGMATRGGGESGQAELNFLRIRRDQRVNLNIEYQGAAAITEAERNLISRGGGRAFDTAGNITGIPTGAEIDPALSALAGAP 248
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: A0A4Q5T586_9SPHN (TonB-dependent receptor (Fragment) n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q5T586_9SPHN) HSP 1 Score: 196 bits (498), Expect = 8.970e-56 Identity = 105/174 (60.34%), Postives = 126/174 (72.41%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
IRALGV T++D+L E+APQ SG+GRG E PV+L+NGRRI FREIR P EA+ R+D+LPEEVALKYGY ADQKVVN VLR RF AIT E T GG K+S+N L I ++ R++ D +Y+ SS LLESERD++SR LF GNI+ V GAEIDP LS LAGTP
Sbjct: 70 IRALGVPTIADLLTELAPQLGSGRGRGGEQPVVLLNGRRISGFREIRDMPIEAIERVDILPEEVALKYGYRADQKVVNIVLRRRFRAITGETEARAPTGGGFAGVKSSLNILKISRDKRVNLDVQYNGSSGLLESERDLVSRTTTGLFDTRGNISG-VGGAEIDPALSALAGTP 242
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: A0A4Q3CVX5_9SPHN (TonB-dependent receptor (Fragment) n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q3CVX5_9SPHN) HSP 1 Score: 195 bits (496), Expect = 9.750e-56 Identity = 103/174 (59.20%), Postives = 127/174 (72.99%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
IRALGV ++ D++AE++PQT SG+GRG E PV+L+NGRRI SF EIR P EA+ R+D+LPEEVALKYGY ADQKV+N VLR RF AIT E+ L T GG KA +N L I ++ R++ D +Y+ S+LLESERD+ISR + LF GNI V GAEIDP LS LAG P
Sbjct: 87 IRALGVPSIGDLIAELSPQTGSGRGRGGEQPVVLLNGRRISSFSEIREMPTEAIERVDILPEEVALKYGYRADQKVINIVLRRRFRAITTEIEPRLPTGGGFAGGKADINILKISRDKRVNLDVQYNGRSTLLESERDVISRPSNGLFDARGNIAG-VGGAEIDPALSALAGAP 259
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: A0A1T5AYA9_9SPHN (TonB-dependent Receptor Plug Domain n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A1T5AYA9_9SPHN) HSP 1 Score: 197 bits (502), Expect = 1.220e-55 Identity = 99/174 (56.90%), Postives = 130/174 (74.71%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
IRALGV++++++L E+APQT SGQGRG E PV L+NGRRI FREIR P EA+ R+D+LPEEVALKYGY+ADQ+VVN VLR RF+AIT EL GG+ T+GG +A +N+L IR++ R++ + EY ++++ E+ER++ISR F GNI GAEIDP LS LAG P
Sbjct: 83 IRALGVNSVAELLEELAPQTRSGQGRGGEQPVTLLNGRRISGFREIRDIPAEAIERVDILPEEVALKYGYSADQRVVNIVLRRRFHAITGELEGGMATRGGGESGEAELNFLRIRRDQRINLNIEYQGAAAITEAERNLISRGGGRAFDTAGNIAGIPIGAEIDPALSALAGAP 256
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: A0A0Q8R4H1_9SPHN (TonB-dependent receptor n=3 Tax=unclassified Sphingomonas TaxID=196159 RepID=A0A0Q8R4H1_9SPHN) HSP 1 Score: 192 bits (489), Expect = 6.910e-54 Identity = 99/174 (56.90%), Postives = 129/174 (74.14%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
IRALGVS+++++L E+APQT SGQGRG E PV L+NGRRI FREIR P EA+ R+D+LPEEVALKYGY+A Q+VVN VLR RF AIT EL GG+ T+GG +A + +L IR++ R++ + EY +++ E+ER++ISR+ F GN+T SGAEIDP LS LAG P
Sbjct: 75 IRALGVSSVAELLEELAPQTRSGQGRGGEQPVTLLNGRRISGFREIRDIPSEAIERVDILPEEVALKYGYSAAQRVVNIVLRRRFRAITGELEGGIATRGGGESGEAELTFLRIRRDQRINLNIEYQADAAITEAERNLISRSG-RAFDTAGNVTGIPSGAEIDPALSALAGGP 247
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: UPI001D00BD5C (TonB-dependent receptor n=1 Tax=Rhizorhabdus phycosphaerae TaxID=2711156 RepID=UPI001D00BD5C) HSP 1 Score: 192 bits (488), Expect = 1.040e-53 Identity = 96/174 (55.17%), Postives = 133/174 (76.44%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
+RALGV++++++L E+APQT SGQGRG E PV L+NGRRI FREIR P EA+ R+D+LPEEVALKYGY+A+Q+VVN VLR RF AIT E+ GGL T+GG +A VN L IR++ RL+ + EY S+++ E++R+++SR+ + A+ GN+ + G+EIDP LS+LAG P
Sbjct: 79 VRALGVNSVAELLDELAPQTRSGQGRGGEAPVTLLNGRRISGFREIRDIPTEAIERVDILPEEVALKYGYSANQRVVNIVLRRRFRAITGEVEGGLSTRGGAETGEAEVNLLHIRRDQRLNVNIEYEHSAAITEADRNLVSRSGRSFDAV-GNVEAATRGSEIDPALSILAGQP 251
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Match: A0A4Q5RP24_9SPHN (TonB-dependent receptor (Fragment) n=1 Tax=Sphingomonadales bacterium TaxID=1978525 RepID=A0A4Q5RP24_9SPHN) HSP 1 Score: 189 bits (481), Expect = 3.210e-53 Identity = 98/174 (56.32%), Postives = 126/174 (72.41%), Query Frame = 1
Query: 1 IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPPEAVTRIDVLPEEVALKYGYTADQKVVNFVLRPRFNAITAELNGGLVTQGGQNDQKASVNYLTIRQENRLSFDAEYSRSSSLLESERDIISRNPDNLFAIPGNITSPVSGAEIDPGLSVLAGTP 522
+RALGV T++D++ E++PQT SG+GRG E PV+L+NGRRI +F EI P EA+ R+D+LPEEV+LKYGY ADQKVVN VLR RF A+TAE + T GG K +N L I ++ R+S D +YS S LLE ERD+ISR ++LF GNI+ + GAEIDP LS +AGTP
Sbjct: 67 VRALGVPTIADLITELSPQTGSGRGRGGERPVVLLNGRRISNFSEISDMPTEAIERVDILPEEVSLKYGYRADQKVVNIVLRRRFRALTAEAESRVPTGGGFAGGKTQLNILKISRDKRVSLDVQYSGRSGLLEDERDLISRPTNSLFDTRGNISG-IGGAEIDPALSAIAGTP 239 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121445.4413.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121445.4413.1 >prot_M-pyrifera_M_contig121445.4413.1 ID=prot_M-pyrifera_M_contig121445.4413.1|Name=mRNA_M-pyrifera_M_contig121445.4413.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp IRALGVSTLSDVLAEIAPQTTSGQGRGDEGPVILVNGRRIGSFREIRSYPback to top mRNA from alignment at M-pyrifera_M_contig121445:2..523- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121445.4413.1 ID=mRNA_M-pyrifera_M_contig121445.4413.1|Name=mRNA_M-pyrifera_M_contig121445.4413.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=522bp|location=Sequence derived from alignment at M-pyrifera_M_contig121445:2..523- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121445:2..523- >mRNA_M-pyrifera_M_contig121445.4413.1 ID=mRNA_M-pyrifera_M_contig121445.4413.1|Name=mRNA_M-pyrifera_M_contig121445.4413.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig121445:2..523- (Macrocystis pyrifera P11B4 male)back to top |