mRNA_M-pyrifera_M_contig12129.4388.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: D7G3C2_ECTSI (F-box domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3C2_ECTSI) HSP 1 Score: 434 bits (1115), Expect = 1.440e-150 Identity = 210/270 (77.78%), Postives = 242/270 (89.63%), Query Frame = 1
Query: 1 ALYFDGELLVTGGSDKTVRVQRNSRDALEQEELGECLHVLEGHSERVTGVARLDGTRLASCSVDGSVRVWDVGTGEALHELTLPSPVYSLGAAEGYLVAGLMDGRVVAWEAKRAGYAPTQILALAAHGGAVTSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGTEESLYLHDFTGRRGLPAVVGSGDPFGGSDD 810
ALYFDG+LLVTGGSDKTVRVQRNSRD LE+E+LGECLHVLEGH+ER+TGVARLDG+RLA+ S DGS+RVWDV +GE LH++ LPSP LGAAEGY+V GL DGRV+AWEAKR APT+IL L AH GAVT+LSFPKQDVLLTGGGDGRVK+WDL+ GGAA NR+++GG+S+THVF+GHAAPVTAVQCDE+RVVSAA+DGTVSVWDIRSG++LFQIYGH G+ SLQFDREQL+TDGT E+LYLHDFTGRRG PAV+GS +PFG DD
Sbjct: 11 ALYFDGDLLVTGGSDKTVRVQRNSRDCLEKEQLGECLHVLEGHTERITGVARLDGSRLATSSADGSLRVWDVSSGETLHDVLLPSPACCLGAAEGYMVTGLTDGRVLAWEAKRPERAPTEILTLDAHRGAVTTLSFPKQDVLLTGGGDGRVKYWDLNQGGAAEGNRFEIGGESYTHVFRGHAAPVTAVQCDEHRVVSAATDGTVSVWDIRSGQELFQIYGHADGVGSLQFDREQLVTDGTGETLYLHDFTGRRGAPAVMGSDNPFGDDDD 280
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: A0A6H5KY61_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY61_9PHAE) HSP 1 Score: 411 bits (1057), Expect = 1.190e-138 Identity = 207/279 (74.19%), Postives = 236/279 (84.59%), Query Frame = 1
Query: 1 ALYFDGELLVTGGSDKTVRVQRNSRDALEQEELGECLHVLEGHSERVTGVARLDGTRLASCSVDGSVRVWDVGTGEALHELTLPSPVYSLGAAEGYLVAGLMDGRVVAWEAKRAGYAPTQILALAAHGGAVTSLSFPKQ-------------DVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGTEESLYLHDFTGRRGLPAVVGSGDPFG 798
ALYFDGELLVTGGSDKTVRVQRNSRD LE+E+LGECLHVLEGH++R+TGVARLDG+RLA+ S DGS+RVWDV +GE LH++ LPSP LGAA GLMDGRV+AWEAKR APT+IL L AH GAVT+LSFPKQ DVLLTGGGDGRVK+WDL+ GGAA NR++VGG+S+THVF+GHAAPVTAVQCDE+RVVSAA DGTVSVWDIRSG++LFQIYGH G+ SLQFDREQL+TDGT E+LYLHDFTGRRG PAV+GSG+PFG
Sbjct: 234 ALYFDGELLVTGGSDKTVRVQRNSRDCLEKEQLGECLHVLEGHTQRITGVARLDGSRLATSSADGSLRVWDVSSGETLHDVLLPSPACCLGAA------GLMDGRVLAWEAKRPERAPTEILTLDAHRGAVTTLSFPKQVVMDDWFGRSRYVDVLLTGGGDGRVKYWDLNQGGAAEGNRFEVGGESYTHVFRGHAAPVTAVQCDEHRVVSAAKDGTVSVWDIRSGQELFQIYGHADGVSSLQFDREQLVTDGTGEALYLHDFTGRRGAPAVMGSGNPFG 506
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: A0A835Z3T4_9STRA (F-box domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3T4_9STRA) HSP 1 Score: 228 bits (582), Expect = 1.510e-70 Identity = 123/254 (48.43%), Postives = 164/254 (64.57%), Query Frame = 1
Query: 10 FDGELLVTGGSDKTVRVQRNS-RDALEQEELGECLHVLEGHSERVTGVARLDGTR-LASCSVDGSVRVWDVGTGEALHELTLPSPVYSLGAAEGYLVAGLMDGRVVAWEAKRAGYAPTQILALAAHG-GAVTSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGTEESLYLHDFTGRRG 762
FDGE L+TGG+D+TV+V RN+ + LGECLH +GH+ERV GV R +GTR + S + D + WD+ TGE + EL LP+P+ LGAAEGYL G+M+G V + K ++L A+ AV S+ FP Q ++TGGG+G V+FWDL GG Y + G H +KGH APV A+Q DE ++VSAASDG V V+D++ G++LF+I GH IRSLQFDR LITDGT ++ +HDF G
Sbjct: 3 FDGEFLITGGADRTVKVHRNTISPGPGPQRLGECLHTWKGHTERVIGVVRPEGTRQVVSAAPDAKLIFWDLDTGEKIRELELPAPILCLGAAEGYLAVGMMNGNVSVFTDKTG----EEVLTWQAYQRAAVRSIYFPSQTRIMTGGGNGVVRFWDLKEGGTPDGGFYTIEGRGIAHEYKGHNAPVVALQGDEVKIVSAASDGVVRVFDMKMGEELFRIEGHSDDIRSLQFDRRFLITDGTMNTIVVHDFASEEG 252
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: A0A7S3YJS6_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YJS6_HETAK) HSP 1 Score: 134 bits (336), Expect = 1.040e-34 Identity = 75/176 (42.61%), Postives = 113/176 (64.20%), Query Frame = 1
Query: 238 ELTLPSPVYSLGAAEGYLVAGLMDGRVVAWEAKRA-GYAPTQILALAAHGGAVTSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRY--DVGGDS---FTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGTEESLYLHDF 747
E+ LP+P LG A GYL AGL+DGRVVA+ A RA + +L + AH GAVT+L F +++ L+TGG DGRV W+L +GG + ++ GD F+GH+ +TA+Q D N++VSA++DG V VWDI +G+ LF++YG + + +D + L+TDG + S +++F
Sbjct: 3 EVRLPAPALCLGQAGGYLTAGLLDGRVVAYSAARAPSPSAPPLLVIQAHKGAVTALHFTEENFLVTGGQDGRVLVWNLFDGGDHDRDTVAMELPGDYVRVLNRRFEGHSGAITALQADCNKIVSASTDGAVKVWDITTGQILFEVYGD-NSVCCIHYDSKTLVTDGVKNSAIVYNF 177
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: A0A7S4DJW4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DJW4_HETAK) HSP 1 Score: 110 bits (274), Expect = 8.060e-26 Identity = 64/139 (46.04%), Postives = 90/139 (64.75%), Query Frame = 1
Query: 238 ELTLPSPVYSLGAAEGYLVAGLMDGRVVAWEAKRA-GYAPTQILALAAHGGAVTSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRY--DVGGDS---FTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSG 636
E+ LP+P LG A GYL AGL+DGRVVA+ A RA + +L + AH GAVT+L F +++ L+TGG DGRV W+L +GG + ++ GD F+GH+ +TA+Q D N++VSA++DG V VWDI +G
Sbjct: 3 EVRLPAPALCLGQAGGYLTAGLLDGRVVAYSAARAPSPSAPPLLVIQAHKGAVTALHFTEENFLVTGGQDGRVLVWNLFDGGDHDRDTVAMELPGDYVRVLNRRFEGHSGAITALQADCNKIVSASTDGAVKVWDITTG 141
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: A0A5J4YHW5_PORPP (F-box/WD repeat-containing protein pof11 n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4YHW5_PORPP) HSP 1 Score: 104 bits (260), Expect = 2.260e-21 Identity = 77/264 (29.17%), Postives = 127/264 (48.11%), Query Frame = 1
Query: 7 YFDGELLVTGGSDKTVRVQRNSRDALEQEELGECLHVLEGHSERVTGVARLDGTRLA-SCSVDGSVRVWDVGTGEALHELTLPSPVYSLGAAEGYLVAGLMDGRVVAWEAK----------RAGYAP----TQILALAAHGGAVTSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGTEESLYLHDFTG 753
+++GEL+++G + + S Q LEGHS+ +TG+ + R+ S ++DG ++V GE L ++ + +PV SL ++ Y++ G G V+A+ + G AP T +L+ AHG + L+T DG ++ W L+ GG + F H+ V +QCDE+++VSAA DGTV V D G L+ + G I S +++ L+TDGT + +HDF+G
Sbjct: 357 FWNGELIISGARNGLISALSLSTRIESQ---------LEGHSDTITGILIAEAGRVVFSTALDGMLKV-QTTKGELLRQIDVGAPVLSLCMSDDYVLVGTKLGNVLAYVVRDLLQPPRPDRSQGDAPNSACTPVLSFEAHGSGNVTAMHAHNSRLVTAAADGELRVWSLTEGGPPLQ------------CFHDHSQAVIDIQCDEHKIVSAARDGTVRVRDF-DGSLLYALTGFTKYIGSARYNDNLLVTDGTNNVITVHDFSG 597
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: R7QUA7_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QUA7_CHOCR) HSP 1 Score: 99.4 bits (246), Expect = 8.260e-20 Identity = 69/216 (31.94%), Postives = 118/216 (54.63%), Query Frame = 1
Query: 127 HSERVTGVARLD--GTRLASCSVDGSVRVWDVGTGEALHELTLPSPVYSLGAAE-GYLVAGLMDGRVVAWEAKRAGYAPTQILALAAHGGAVTSLSFPKQ-DVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGTEESLYLHDFTGRRG 762
H ++++ + RLD +R+ S S+DG+VRV + TGE L + + PV S+ E GYL+ G GRV+A++A+R + +L++ H T+L+F ++ VL+TG G +K W ++ + H A V +VQ D ++VVS++ DG+V+V+ + S ++L+ I G + + FD +LI DGT + + H F +G
Sbjct: 235 HIDQISAL-RLDVKNSRVYSASIDGTVRVSHLDTGEELSMIRVGEPVLSMTLTEKGYLLLGSTSGRVLAYQAERGFH----LLSMVCHNSNTTALAFWEETQVLVTGDAAGNLKVWSFND-------------STLLGTLPKHEAAVMSVQIDGSKVVSSSRDGSVAVFGLASRQRLYSIVGFTKYLGAATFDDVRLIADGTNDFVICHRFDSDQG 432
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: A0A7S0ENC4_9EUKA (Hypothetical protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0ENC4_9EUKA) HSP 1 Score: 79.0 bits (193), Expect = 4.890e-14 Identity = 55/176 (31.25%), Postives = 80/176 (45.45%), Query Frame = 1
Query: 226 EALHELTLPSPVYSLGAAEGYLVAGLMDGRVVAWEAKRAGYAPTQILALAAHGGAVTSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHV--FKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGTEESLYLHDF 747
E L L P+Y++G EG+ GL +G VV ++ + AH AV+++ L W R D GD + F GH+ V A+Q D ++VVSAA DGTV VWD+ +GK+ F++ G + SL +LI DGT ++ DF
Sbjct: 20 EELQCLVAAKPIYAMGTCEGFAALGLANGHVVLCSLSPL----RELFSFEAHAAAVSAVELISPSQL-----------W-----------RLDEAGDDERRLVRFDGHSGAVAALQGDGDKVVSAARDGTVRVWDVEAGKERFRLQGFTRYVGSLHLTPSRLIADGTNNAVVCLDF 169
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: A0A662YEP8_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YEP8_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.790e-11 Identity = 76/250 (30.40%), Postives = 112/250 (44.80%), Query Frame = 1
Query: 22 LLVTGGSDKTVRVQRNSRDALEQEELGECLHVLEGHSERVT-------GVARL-----DGTRLASCSVDGSVRVWDVGTGEALHELTLP-SPVYSLGAAEGYLVAGLMDGRVVAWEAK-RAGYAPTQ-ILALAAHGGAV--TSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGT 720
L+ +G D TVR+ +R++ + VL+G T GV+ L D C S+++WD+ G+ ++ + V L + LV D V W+A R+G Q + AL HGG + SL P + TG GDG V+ WDL RY G T +GH PVT +Q D ++VSA DG + VWD+ SG L + H G+ L+ R+ L+ G+
Sbjct: 1351 LVASGSDDGTVRLWETTRES--------SVAVLDGDKGTTTTSPATNGGVSCLRFLASDDDLAVGCRCR-SLQIWDLAAGKMKVKVEAHRAGVRDLQVSGTRLVTAANDRVVKVWDAAFRSGSGTQQYVQALRDHGGPIHCVSLGGPADPNICTGAGDGLVRLWDL---------RYVQRGPRLT--LRGHVGPVTRLQRDFTKLVSAGEDGWLRVWDMHSGVCLREKQVHRSGVTCLEM-RDSLVYSGS 1579
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Match: W2QBP1_PHYPN (UDENN domain-containing protein n=43 Tax=Phytophthora TaxID=4783 RepID=W2QBP1_PHYPN) HSP 1 Score: 72.0 bits (175), Expect = 3.250e-10 Identity = 74/253 (29.25%), Postives = 110/253 (43.48%), Query Frame = 1
Query: 22 LLVTGGSDKTVRVQRNSRDALEQEELGECLHVLEGHSERVTGVARLDG----TRLASCSVD-------GSVRVWDVGTGEALHELTLPSPVYSLGAAE-----GYLVAGLMDGRVVAWEA--KRAGYAPTQILALAAHGGAV--TSLSFPKQDVLLTGGGDGRVKFWDLSNGGAAVSNRYDVGGDSFTHVFKGHAAPVTAVQCDENRVVSAASDGTVSVWDIRSGKQLFQIYGHYGGIRSLQFDREQLITDGT 720
LLV+G D TVR+ ++++ + +L GH + TG +G RL S D +V++WD+ A+ +L + + G + LV D V W+ + G + L HGG V SL P + TG DG V+ WDL RY G T +GH PVT +Q D ++VSA DG + VWD+ SG L + H G+ L+ R+ L+ G+
Sbjct: 1459 LLVSGSDDGTVRIWETTKES--------SVALLSGH--KATGKPADNGGVSCLRLLSSDDDLALGYRRRTVQIWDL----AVCKLKVNVEAHQAGVRDLQVSGTRLVTAANDRVVKVWDTSFRGTGGPVHAVQDLCGHGGPVQCVSLGGPADPTICTGAADGLVRVWDL---------RYVQRGPRLT--LRGHIGPVTRLQRDFTKLVSAGEDGWLRVWDMHSGSCLREKKVHSSGVTCLEM-RDSLVYSGS 1685 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12129.4388.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12129.4388.1 >prot_M-pyrifera_M_contig12129.4388.1 ID=prot_M-pyrifera_M_contig12129.4388.1|Name=mRNA_M-pyrifera_M_contig12129.4388.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=310bp ALYFDGELLVTGGSDKTVRVQRNSRDALEQEELGECLHVLEGHSERVTGVback to top mRNA from alignment at M-pyrifera_M_contig12129:362..9304+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12129.4388.1 ID=mRNA_M-pyrifera_M_contig12129.4388.1|Name=mRNA_M-pyrifera_M_contig12129.4388.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=8943bp|location=Sequence derived from alignment at M-pyrifera_M_contig12129:362..9304+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12129:362..9304+ >mRNA_M-pyrifera_M_contig12129.4388.1 ID=mRNA_M-pyrifera_M_contig12129.4388.1|Name=mRNA_M-pyrifera_M_contig12129.4388.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1860bp|location=Sequence derived from alignment at M-pyrifera_M_contig12129:362..9304+ (Macrocystis pyrifera P11B4 male)back to top |