prot_M-pyrifera_M_contig12116.4354.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12116.4354.1
Unique Nameprot_M-pyrifera_M_contig12116.4354.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length233
Homology
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: D7FNB2_ECTSI (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNB2_ECTSI)

HSP 1 Score: 95.9 bits (237), Expect = 5.170e-19
Identity = 54/84 (64.29%), Postives = 63/84 (75.00%), Query Frame = 0
Query:    1 DIPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKRREA---RDRFDHLNSES---RGISFPLMRGESP 78
            DIPALRQFCLVAATAV VGF LQ++WFMAAL LDARRVSQGRLDLAPW+   E     DRF + + ES   R ++ PL+  +SP
Sbjct:  477 DIPALRQFCLVAATAVVVGFALQISWFMAALCLDARRVSQGRLDLAPWMTLPEEDDDSDRFWYSSPESGSVRDLTVPLLGFQSP 560          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A6A5A678_9STRA (SSD domain-containing protein (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5A678_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 5.290e-9
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 51
            IPAL  FC+VAA AV   +VLQ+TWF AAL+LDARR+   R DL PW+K+
Sbjct:   28 IPALESFCMVAALAVVADYVLQMTWFAAALALDARRMRARRYDLCPWIKK 77          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A067D4S9_SAPPC (SSD domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067D4S9_SAPPC)

HSP 1 Score: 65.1 bits (157), Expect = 1.640e-8
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 51
            IPAL  FC+VAA AV   +VLQ+TWF AAL++DARRV   R DL PW+K+
Sbjct:  422 IPALESFCIVAALAVVADYVLQMTWFAAALAIDARRVRARRYDLMPWMKK 471          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: W4FCV1_9STRA (SSD domain-containing protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4FCV1_9STRA)

HSP 1 Score: 65.1 bits (157), Expect = 1.640e-8
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 51
            IPAL  FC+VAA AV   +VLQ+TWF AAL+LDARR+   R DL PW+K+
Sbjct:  413 IPALESFCMVAALAVVADYVLQMTWFAAALALDARRMRARRYDLCPWIKK 462          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: F0WDX3_9STRA (ResistanceNodulationCell Division (RND) Superfamily putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WDX3_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.010e-8
Identity = 31/52 (59.62%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKRRE 53
            IPAL  FC+VAA AV V  +LQ+TWFM+A+ LDA RV   R DL PW+++RE
Sbjct:  467 IPALETFCVVAAVAVLVDLILQLTWFMSAIVLDAHRVRARRYDLFPWIRKRE 518          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A421G8C8_9STRA (SSD domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421G8C8_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 3.090e-8
Identity = 32/51 (62.75%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKRR 52
            IPAL  FC+VAA AVA  FVLQ+TWF AAL LDARR+   R D+ PW+K++
Sbjct:  595 IPALTSFCVVAALAVAADFVLQMTWFAAALVLDARRMRSRRYDVFPWIKQK 645          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A485KZV1_9STRA (Aste57867_13917 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KZV1_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.010e-8
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 51
            IPAL  FC VAA AV   +VLQ+TWF AAL+LDARR+   R DL PW+K+
Sbjct:  369 IPALESFCTVAAIAVVADYVLQMTWFAAALALDARRMRARRYDLCPWIKK 418          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A6G0XWB6_9STRA (SSD domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XWB6_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.030e-8
Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 51
            IPAL  FC VAA AV   +VLQ+TWF AAL+LDARR+   R DL PW+K+
Sbjct:  413 IPALESFCTVAAIAVIADYVLQMTWFAAALALDARRIRSRRYDLFPWIKK 462          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A024UE41_9STRA (SSD domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UE41_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.040e-8
Identity = 30/50 (60.00%), Postives = 37/50 (74.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 51
            IPAL  FC+VAA AV   + LQ+TWF AAL+LDARR+   R DL PW+K+
Sbjct:  413 IPALESFCIVAALAVVADYCLQMTWFAAALALDARRIRARRYDLCPWMKK 462          
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Match: A0A1V9ZMJ5_9STRA (Resistance-Nodulation-Cell Division (RND) Superfamily n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZMJ5_9STRA)

HSP 1 Score: 63.9 bits (154), Expect = 4.040e-8
Identity = 30/50 (60.00%), Postives = 38/50 (76.00%), Query Frame = 0
Query:    2 IPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLKR 51
            IPAL  FC+VAA AV   ++LQ+TWF AAL++DARRV   R DL PW+K+
Sbjct:  422 IPALESFCIVAAIAVLADYLLQITWFAAALAIDARRVRARRYDLFPWIKK 471          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12116.4354.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
D7FNB2_ECTSI5.170e-1964.29SSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A6A5A678_9STRA5.290e-962.00SSD domain-containing protein (Fragment) n=1 Tax=A... [more]
A0A067D4S9_SAPPC1.640e-862.00SSD domain-containing protein n=2 Tax=Saprolegnia ... [more]
W4FCV1_9STRA1.640e-862.00SSD domain-containing protein n=3 Tax=Aphanomyces ... [more]
F0WDX3_9STRA3.010e-859.62ResistanceNodulationCell Division (RND) Superfamil... [more]
A0A421G8C8_9STRA3.090e-862.75SSD domain-containing protein n=4 Tax=Phytophthora... [more]
A0A485KZV1_9STRA4.010e-862.00Aste57867_13917 protein n=1 Tax=Aphanomyces stella... [more]
A0A6G0XWB6_9STRA4.030e-862.00SSD domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A024UE41_9STRA4.040e-860.00SSD domain-containing protein n=1 Tax=Aphanomyces ... [more]
A0A1V9ZMJ5_9STRA4.040e-860.00Resistance-Nodulation-Cell Division (RND) Superfam... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000731Sterol-sensing domainPFAMPF12349Sterol-sensingcoord: 1..50
e-value: 3.1E-12
score: 46.6
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 1..33
score: 13.236
NoneNo IPR availablePANTHERPTHR45727FAMILY NOT NAMEDcoord: 2..54
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 34..233
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availableTMHMMTMhelixcoord: 7..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12116contigM-pyrifera_M_contig12116:3204..6338 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12116.4354.1mRNA_M-pyrifera_M_contig12116.4354.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12116 3204..6338 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12116.4354.1 ID=prot_M-pyrifera_M_contig12116.4354.1|Name=mRNA_M-pyrifera_M_contig12116.4354.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=233bp
DIPALRQFCLVAATAVAVGFVLQVTWFMAALSLDARRVSQGRLDLAPWLK
RREARDRFDHLNSESRGISFPLMRGESPEHQLGSSFHRSGVAAPGAANSG
NTDGDWSSPEDTVTEAFNRLASGGGGGDDRDDQYSQHYRALTSGFGSGSE
ANPALFARRAVRPYADTVADTAAAAAVASRPRGRTAGLDGTGDRNPPPSG
GGGRSIVGGVIDGTIDSRTVGGSHSGGDGSSWP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD