prot_M-pyrifera_M_contig1211.4344.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1211.4344.1
Unique Nameprot_M-pyrifera_M_contig1211.4344.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length80
Homology
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BLAST of mRNA_M-pyrifera_M_contig1211.4344.1 vs. uniprot
Match: I2Q523_9DELT (Uncharacterized protein n=2 Tax=Desulfovibrionaceae TaxID=194924 RepID=I2Q523_9DELT)

HSP 1 Score: 58.2 bits (139), Expect = 1.980e-9
Identity = 32/68 (47.06%), Postives = 41/68 (60.29%), Query Frame = 0 
Query:    8 LPLAAVALAIVVLGA-----WRLRGGR-PLS-LPGDIRYEGDGFRVHFPWVSCLLLSAFGNVLMWAFQ 68
            L LA   L +V+L A     W+    R PL  LPGDI   G GF VHFPWV+CL +SA  ++L+W F+
Sbjct:   12 LGLALAGLGLVLLAAEKTDLWQSLWARFPLGRLPGDIHLRGQGFSVHFPWVTCLAVSAVVSILLWIFR 79
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BLAST of mRNA_M-pyrifera_M_contig1211.4344.1 vs. uniprot
Match: A0A7C3RF94_9BACT (DUF2905 domain-containing protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A7C3RF94_9BACT)

HSP 1 Score: 49.7 bits (117), Expect = 3.360e-6
Identity = 28/62 (45.16%), Postives = 35/62 (56.45%), Query Frame = 0 
Query:    8 LPLAAVALAIVVLGAWRLRGGRPLS-LPGDIRYEGDGFRVHFPWVSCLLLSAFGNVLMWAFQ 68
            L +  V L +V L  W   G   L  LPGDI Y    F VHFP V+CLL+SA   +L+W F+
Sbjct:    8 LVVCGVVLVVVGLLVWSGFGKGWLGRLPGDIHYTRGNFSVHFPIVTCLLISAVLTLLLWLFR 69
[Close]
BLAST of mRNA_M-pyrifera_M_contig1211.4344.1 vs. uniprot
Match: A0A6M1RZV5_9BACT (DUF2905 domain-containing protein n=2 Tax=Limisphaera ngatamarikiensis TaxID=1324935 RepID=A0A6M1RZV5_9BACT)

HSP 1 Score: 47.8 bits (112), Expect = 1.920e-5
Identity = 27/62 (43.55%), Postives = 36/62 (58.06%), Query Frame = 0 
Query:    8 LPLAAVALAIVVLGAWRLRGGRPLS-LPGDIRYEGDGFRVHFPWVSCLLLSAFGNVLMWAFQ 68
            L +A + LA+V +  W   G   L  LPGDI Y    F +HFP V+CLLLS    +L+W F+
Sbjct:    8 LVMAGLMLAVVGVLLWTGWGRGWLGRLPGDIHYTRGNFSLHFPIVTCLLLSLVLTMLLWLFR 69
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1211.4344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
I2Q523_9DELT1.980e-947.06Uncharacterized protein n=2 Tax=Desulfovibrionacea... [more]
A0A7C3RF94_9BACT3.360e-645.16DUF2905 domain-containing protein n=1 Tax=Verrucom... [more]
A0A6M1RZV5_9BACT1.920e-543.55DUF2905 domain-containing protein n=2 Tax=Limispha... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021320Protein of unknown function DUF2905PFAMPF11146DUF2905coord: 12..67
e-value: 8.5E-13
score: 48.3
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 48..67
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 21..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 10..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 25..47
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 68..80
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..9
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 47..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1211contigM-pyrifera_M_contig1211:8604..8843 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1211.4344.1mRNA_M-pyrifera_M_contig1211.4344.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1211 8604..8843 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1211.4344.1 ID=prot_M-pyrifera_M_contig1211.4344.1|Name=mRNA_M-pyrifera_M_contig1211.4344.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp
MITPSFRLPLAAVALAIVVLGAWRLRGGRPLSLPGDIRYEGDGFRVHFPW
VSCLLLSAFGNVLMWAFQGRGRSGARTGGG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021320DUF2905