mRNA_M-pyrifera_M_contig12108.4342.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: D8LDA6_ECTSI (Post-GPI attachment to proteins factor 3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDA6_ECTSI) HSP 1 Score: 157 bits (398), Expect = 9.580e-42 Identity = 106/253 (41.90%), Postives = 135/253 (53.36%), Query Frame = 1
Query: 1 ESCVEQLCGIKYVREETLMPPTMLRYQQQQALQERLDQHLLEQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXQ---ESAASLSALEGEYTLTRKNKGERGQGAAGGEASV---LANARLGVGGGRGSGA--AGVAFGGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGIVDRYVHSPPWHLRAMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFYHVIFSRGE 735
++CV++LCGIKYVRE+ ++ L+ RLD+HL + + XXXXXXXXXXX + E A ++ EG T R + +R A G A+V G G G GA G + +VDRYVH+PPWHLR MGWDCESEC + CM +HVE R+ AG + QY+GKWPFRRVWGIQELF+SLFSAGNGLPH YH++ S G+
Sbjct: 34 DNCVDKLCGIKYVREDQDPELKSSEVARRDRLRRRLDEHLTQLQTLQQXXXXXXXXXXXPTTAAEKTGASGLRRRLEEGAGEASREGRGTAHRDHLPQRQPPAGSGAAAVGFGXXXXXXGDGAEEGVGALGGGAEWADGGRRALSAVQDATGGEGKAGAVGGSSAASVAVVDRYVHNPPWHLRVMGWDCESECKHTCMNLHVESRLAAGGDIWQYYGKWPFRRVWGIQELFSSLFSAGNGLPHLYHLLLSPGQ 286
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A1L0FSJ8_9ASCO (Post-GPI attachment to proteins factor 3 n=2 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0FSJ8_9ASCO) HSP 1 Score: 95.9 bits (237), Expect = 2.480e-19 Identity = 37/67 (55.22%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 511 PWHLRAMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFY 711
PW+L+ +GW+C S C YQC + E RI+ ++V Q+HGKWPFRR+ GIQEL + +FS GN LPH+Y
Sbjct: 74 PWYLKLLGWNCRSNCDYQCQQIVTEERIKNNQEVYQFHGKWPFRRIAGIQELASVIFSIGNFLPHYY 140
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A1G4MGU9_LACFM (Post-GPI attachment to proteins factor 3 n=1 Tax=Lachancea fermentati TaxID=4955 RepID=A0A1G4MGU9_LACFM) HSP 1 Score: 92.0 bits (227), Expect = 4.410e-18 Identity = 40/81 (49.38%), Postives = 54/81 (66.67%), Query Frame = 1
Query: 496 YVHSPPWHLR-AMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFYHVIFSRGE 735
Y P LR + WDCES+C YQC + LRIE GE++ Q+HGKWPF+R++GIQEL+++LFS N +PH+ R E
Sbjct: 61 YFDETPVFLRKCLLWDCESDCDYQCQQIVTILRIENGEEIYQFHGKWPFKRMFGIQELYSTLFSIANFVPHYRGFKILRSE 141
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A7H9HQX9_9SACH (Post-GPI attachment to proteins factor 3 n=1 Tax=Torulaspora sp. CBS 2947 TaxID=2792677 RepID=A0A7H9HQX9_9SACH) HSP 1 Score: 91.3 bits (225), Expect = 8.120e-18 Identity = 35/59 (59.32%), Postives = 47/59 (79.66%), Query Frame = 1
Query: 535 WDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFY 711
WDC S+C YQC + + RIEAGE++ Q+HGKWPF R++G QELF++LFS GN +PH+Y
Sbjct: 72 WDCISDCDYQCQQIITKTRIEAGEEILQFHGKWPFLRLFGTQELFSTLFSIGNFIPHYY 130
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A3F2Y0W5_DEKBR (Post-GPI attachment to proteins factor 3 n=4 Tax=Dekkera bruxellensis TaxID=5007 RepID=A0A3F2Y0W5_DEKBR) HSP 1 Score: 90.5 bits (223), Expect = 1.730e-17 Identity = 38/74 (51.35%), Postives = 49/74 (66.22%), Query Frame = 1
Query: 493 RYVHSP-PWHLRAMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFY 711
R+V P W+LR +GW+C C YQC R E GE V Q+HGKWPF RV+G+QE F++LFS GN PH++
Sbjct: 70 RFVTLPLAWNLRFLGWECYQNCDYQCQRFITADRKEKGESVVQFHGKWPFARVFGVQEFFSTLFSIGNFFPHYW 143
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: H8X7Y6_CANO9 (Post-GPI attachment to proteins factor 3 n=1 Tax=Candida orthopsilosis (strain 90-125) TaxID=1136231 RepID=H8X7Y6_CANO9) HSP 1 Score: 90.5 bits (223), Expect = 2.250e-17 Identity = 38/89 (42.70%), Postives = 53/89 (59.55%), Query Frame = 1
Query: 493 RYVHSP-PWHLRAMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGN-------GLPHFYHVIFSRGE 735
++V P PWHLR +GW C+S C YQC + + R + E++ Q+HGKWPF RVWGIQEL + L S GN G Y ++ + +
Sbjct: 72 QFVEMPLPWHLRLLGWTCQSNCDYQCQRVITDERKKHDEEIYQFHGKWPFLRVWGIQELMSVLMSLGNLIVTYKFGFRRIYAIVSDKSQ 160
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A6B2LAN2_9EUKA (Post-GPI attachment to proteins factor 3 n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LAN2_9EUKA) HSP 1 Score: 89.0 bits (219), Expect = 3.350e-17 Identity = 36/65 (55.38%), Postives = 46/65 (70.77%), Query Frame = 1
Query: 535 WDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFYHVIFSR 729
WDC +EC YQCM H +LR ++G V QYHGKWPFRRV G+QELF+S+FS N +P+ + R
Sbjct: 52 WDCSAECKYQCMRQHTKLRTDSGLPVVQYHGKWPFRRVLGMQELFSSVFSITNAIPNVVYFFKYR 116
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A0H5C523_CYBJN (Post-GPI attachment to proteins factor 3 n=1 Tax=Cyberlindnera jadinii (strain ATCC 18201 / CBS 1600 / BCRC 20928 / JCM 3617 / NBRC 0987 / NRRL Y-1542) TaxID=983966 RepID=A0A0H5C523_CYBJN) HSP 1 Score: 89.0 bits (219), Expect = 4.230e-17 Identity = 35/67 (52.24%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 520 LRAMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFYHVI 720
LR + WDC S+C YQC + ELR+ GE+V Q+HGKWPF+R+ G QEL ++LFS GN +PH+ ++
Sbjct: 63 LRLLLWDCPSDCDYQCQQIVTELRLRDGEEVLQFHGKWPFKRLLGTQELASALFSLGNFIPHYQNLF 129
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A1E3NT40_9ASCO (Post-GPI attachment to proteins factor 3 n=1 Tax=Pichia membranifaciens NRRL Y-2026 TaxID=763406 RepID=A0A1E3NT40_9ASCO) HSP 1 Score: 89.4 bits (220), Expect = 4.470e-17 Identity = 38/76 (50.00%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 484 IVDRYVHSP-PWHLRAMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHF 708
+V+ + +P +HL +GWDC S C YQC + + RI G +V Q+HGKWPF RV G+QELF++LFS GN +P+F
Sbjct: 67 LVNLFEKTPISFHLSLLGWDCSSNCDYQCQRLVTDDRIAEGLKVYQFHGKWPFVRVLGVQELFSTLFSIGNWIPNF 142
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Match: A0A147B951_9ACAR (Post-GPI attachment to proteins factor 3 (Fragment) n=1 Tax=Carios mimon TaxID=360319 RepID=A0A147B951_9ACAR) HSP 1 Score: 87.4 bits (215), Expect = 1.270e-16 Identity = 37/75 (49.33%), Postives = 46/75 (61.33%), Query Frame = 1
Query: 487 VDRYVHSPPWHLRAMGWDCESECGYQCMTMHVELRIEAGEQVQQYHGKWPFRRVWGIQELFASLFSAGNGLPHFY 711
D ++ PW+L + WDC EC Y CM +EL AGE V Q+HGKWPF RV+GIQE + FS NGL H +
Sbjct: 26 TDAFLDQRPWYLNVLDWDCPDECRYSCMWYVLELFESAGEPVPQFHGKWPFVRVYGIQEPASMFFSVLNGLSHVW 100 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12108.4342.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12108.4342.1 >prot_M-pyrifera_M_contig12108.4342.1 ID=prot_M-pyrifera_M_contig12108.4342.1|Name=mRNA_M-pyrifera_M_contig12108.4342.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp ESCVEQLCGIKYVREETLMPPTMLRYQQQQALQERLDQHLLEQRQRQHQRback to top mRNA from alignment at M-pyrifera_M_contig12108:4051..9417- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12108.4342.1 ID=mRNA_M-pyrifera_M_contig12108.4342.1|Name=mRNA_M-pyrifera_M_contig12108.4342.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5367bp|location=Sequence derived from alignment at M-pyrifera_M_contig12108:4051..9417- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12108:4051..9417- >mRNA_M-pyrifera_M_contig12108.4342.1 ID=mRNA_M-pyrifera_M_contig12108.4342.1|Name=mRNA_M-pyrifera_M_contig12108.4342.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig12108:4051..9417- (Macrocystis pyrifera P11B4 male)back to top |