mRNA_M-pyrifera_M_contig121052.4339.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A0A5A8C9H3_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8C9H3_CAFRO) HSP 1 Score: 92.4 bits (228), Expect = 1.390e-19 Identity = 46/102 (45.10%), Postives = 64/102 (62.75%), Query Frame = 1
Query: 1 WATLVNKTMRDEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKR 306
W+ +VNKT RD +F+++PGA E+ VAG +R M G+ P+ L KI+NL+D DSDG LDD+EYA+ +LL G LPD LP+ + PP +R
Sbjct: 505 WSRMVNKTARDADFFRIPGASEAYKVAGGEVRDTMLASGLAAPQ-------LSKIFNLSDHDSDGYLDDEEYALLRYLLEAVADGMELPDTLPEHMVPPKQR 599
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: X6LXM2_RETFI (Uncharacterized protein n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6LXM2_RETFI) HSP 1 Score: 76.3 bits (186), Expect = 5.680e-14 Identity = 41/105 (39.05%), Postives = 63/105 (60.00%), Query Frame = 1
Query: 1 WATLVNKTMR---DEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKR 306
WA +N T++ D +FY L + +SG + +R +M + G++ ++L +WNLADID DG +D +E+A+CM+L+ + KRG LP LP L PP KR
Sbjct: 252 WA--INATLKAKYDTKFYSL--SIQSGKASAFEIRNIMMQSGLSV-------EVLKTVWNLADIDQDGKMDHEEFALCMYLVDIVKRGNKLPPTLPIHLIPPGKR 345
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A0A0G2L0S9_DANRE (Epidermal growth factor receptor pathway substrate 15-like 1b n=1 Tax=Danio rerio TaxID=7955 RepID=A0A0G2L0S9_DANRE) HSP 1 Score: 72.4 bits (176), Expect = 1.460e-12 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 22 TMRDEEFYKLPGARES-----GLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKR 306
T++ E+ K G ES GL++G ++ V+ + D+L KIW+L+DID DGSLD E++V MHL+ A+ EP+P LP L PPSKR
Sbjct: 123 TVKPEDKAKYDGIFESLSPIGGLLSGDKVKLVLMNSNLPL-------DVLGKIWDLSDIDKDGSLDKDEFSVAMHLVYAAREKEPVPSSLPTSLIPPSKR 215
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A0A6A7G4N2_9CRUS (EH domain-containing protein 3 (Fragment) n=2 Tax=Hirondellea gigas TaxID=1518452 RepID=A0A6A7G4N2_9CRUS) HSP 1 Score: 72.4 bits (176), Expect = 1.480e-12 Identity = 40/98 (40.82%), Postives = 56/98 (57.14%), Query Frame = 1
Query: 19 KTMRDEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKRPG 312
K+ D F++L ++G R +M + G++ DIL KIW L DID DGS+D +E+AVCM+L+ + G LP LP L PPS+RPG
Sbjct: 512 KSKYDNYFHRL--CTHGNKISGEQARPMMMDSGLSV-------DILRKIWELGDIDCDGSVDAEEFAVCMYLVDQCREGVELPAALPFQLIPPSRRPG 600
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A0A8M9P2C3_DANRE (epidermal growth factor receptor substrate 15-like 1 isoform X1 n=2 Tax=Danio rerio TaxID=7955 RepID=A0A8M9P2C3_DANRE) HSP 1 Score: 72.4 bits (176), Expect = 1.530e-12 Identity = 41/100 (41.00%), Postives = 58/100 (58.00%), Query Frame = 1
Query: 22 TMRDEEFYKLPGARES-----GLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKR 306
T++ E+ K G ES GL++G ++ V+ + D+L KIW+L+DID DGSLD E++V MHL+ A+ EP+P LP L PPSKR
Sbjct: 123 TVKPEDKAKYDGIFESLSPIGGLLSGDKVKLVLMNSNLPL-------DVLGKIWDLSDIDKDGSLDKDEFSVAMHLVYAAREKEPVPSSLPTSLIPPSKR 215
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A0A3B3TB76_9TELE (Intersectin 2 n=4 Tax=Paramormyrops kingsleyae TaxID=1676925 RepID=A0A3B3TB76_9TELE) HSP 1 Score: 72.0 bits (175), Expect = 2.150e-12 Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 1
Query: 1 WATLVNKTMRDEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKRPG 312
WA + +R + + + +G ++G +R V+T +T + L IWNLAD+D DG L +E+ + MHL+ +AK G+PLP LP DL PPS R G
Sbjct: 231 WAVPQSSRLRYRQQFNSLDKQMTGYLSGPQVRNVLTASQLTQTQ-------LANIWNLADVDKDGKLKAEEFILAMHLVDVAKIGQPLPLTLPLDLVPPSFRSG 327
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A0A0L8GTK2_OCTBM (Uncharacterized protein (Fragment) n=1 Tax=Octopus bimaculoides TaxID=37653 RepID=A0A0L8GTK2_OCTBM) HSP 1 Score: 70.9 bits (172), Expect = 2.350e-12 Identity = 34/104 (32.69%), Postives = 53/104 (50.96%), Query Frame = 1
Query: 1 WATLVNKTMRDEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKRPG 312
W K + + + + G + G + R ++ G+ P IL +IWNL+D+DSDG L E+ + MHL+ +A+ G+PLP KLP L P + G
Sbjct: 59 WVITPQKKQQFVQMFATQDRNQQGYIMGVDARPLLLNSGLPQP-------ILAQIWNLSDVDSDGKLSCDEFCIAMHLIDVARTGQPLPAKLPPSLHPSTSNRG 155
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: W5LYG1_LEPOC (Intersectin 2 n=5 Tax=Lepisosteidae TaxID=7915 RepID=W5LYG1_LEPOC) HSP 1 Score: 71.6 bits (174), Expect = 2.940e-12 Identity = 37/107 (34.58%), Postives = 55/107 (51.40%), Query Frame = 1
Query: 1 WATLVNKTMRDEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKRPGGGG 321
WA + ++ + + +G ++G +R + +T + L IWNLAD+D DG L E+ + MHL+ +AK G+PLP LP DL PPS R G G
Sbjct: 231 WAVPQSSRLKYRQIFNSIDKAMTGYLSGPQVRNALATSNLTQTQ-------LATIWNLADVDKDGKLKADEFILAMHLVDMAKTGQPLPLTLPTDLIPPSLRSGKSG 330
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A0A8C9S2A5_SCLFO (Intersectin-2 n=8 Tax=Scleropages formosus TaxID=113540 RepID=A0A8C9S2A5_SCLFO) HSP 1 Score: 71.2 bits (173), Expect = 4.010e-12 Identity = 38/107 (35.51%), Postives = 59/107 (55.14%), Query Frame = 1
Query: 1 WATLVNKTMRDEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKRPGGGG 321
WA + ++ + + + +G ++G +R V+T +T + L IWNLAD+D DG L +E+ + MHL+ +AK G+PLP LP +L PPS R G G
Sbjct: 233 WAVPHSSRLKYRQQFNSLDKQMTGYLSGPQVRNVLTASQLTQTQ-------LANIWNLADVDKDGKLKAEEFILAMHLVDMAKTGQPLPLSLPMELVPPSFRSGSLG 332
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Match: A8WU59_CAEBR (Protein CBR-EHS-1 n=2 Tax=Caenorhabditis TaxID=6237 RepID=A8WU59_CAEBR) HSP 1 Score: 70.9 bits (172), Expect = 5.260e-12 Identity = 38/80 (47.50%), Postives = 50/80 (62.50%), Query Frame = 1
Query: 70 GLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLADIDSDGSLDDKEYAVCMHLLTLAKRGEPLPDKLPDDLFPPSKRP 309
GLV G +MR M G++P IL +W LADI G L+ +++A+ MHL+ +AKRGEPLP +LP L PPS RP
Sbjct: 354 GLVDGQDMRGPMMTTGLSPT-------ILAHVWALADIKKCGQLNLEQFALIMHLMEMAKRGEPLPSELPPHLLPPSFRP 426 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121052.4339.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121052.4339.1 >prot_M-pyrifera_M_contig121052.4339.1 ID=prot_M-pyrifera_M_contig121052.4339.1|Name=mRNA_M-pyrifera_M_contig121052.4339.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp MRDEEFYKLPGARESGLVAGANMRTVMTEFGITPPEGTSIGDILFKIWNLback to top mRNA from alignment at M-pyrifera_M_contig121052:8..337+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121052.4339.1 ID=mRNA_M-pyrifera_M_contig121052.4339.1|Name=mRNA_M-pyrifera_M_contig121052.4339.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=330bp|location=Sequence derived from alignment at M-pyrifera_M_contig121052:8..337+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121052:8..337+ >mRNA_M-pyrifera_M_contig121052.4339.1 ID=mRNA_M-pyrifera_M_contig121052.4339.1|Name=mRNA_M-pyrifera_M_contig121052.4339.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig121052:8..337+ (Macrocystis pyrifera P11B4 male)back to top |