mRNA_M-pyrifera_M_contig121044.4338.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A0A812QRD1_9DINO (Dcd1B protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QRD1_9DINO) HSP 1 Score: 103 bits (258), Expect = 3.670e-24 Identity = 50/107 (46.73%), Postives = 68/107 (63.55%), Query Frame = 1
Query: 7 VNIYNPKNYPTDGD-HPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQ-VAAMEASGNMHAAIYDWGSRTFYISNASPTQDGPVVPAYERQFLSLDMDTQ 321
VNIYN N+P HP DLV++DKH QPS H C +LM++ YGK+ I V A++ +G+ HAA+YD+G+ T Y+SNASP +G PAY + SL+M Q
Sbjct: 249 VNIYNDVNFPAYPPYHPLLKDLVFIDKHTQPSHHMCFGSLMEKLYGKLSPQNVISYVTALQQTGDTHAAVYDFGTSTMYVSNASPFVNGSATPAYNMPWSSLNMTQQ 355
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A0A6B2L4U1_9EUKA (Uncharacterized protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2L4U1_9EUKA) HSP 1 Score: 102 bits (254), Expect = 2.790e-23 Identity = 51/113 (45.13%), Postives = 71/113 (62.83%), Query Frame = 1
Query: 1 EYVNIYNPKNYPTDGDHPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQ-VAAMEASGNMHAAIYDWGSRTFYISNASPTQDGPVVPAYERQFLSLDMDTQLFDAT 336
+Y+ +Y+ NYP HP+ +LVYV+KH QPS CL +Q+ YG ID I+ VAA +G+ HAA+YD+ + Y+S ASP +G VPAY+RQ+ +M TQLF T
Sbjct: 321 DYIQVYDDVNYPVYEGHPKMKNLVYVNKHKQPSKEPCLGEALQEGYGSIDAEYLIRYVAAPHQTGDSHAAVYDFAQDSIYVSIASPYINGSFVPAYDRQYTKFNM-TQLFSET 432
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A0A813A3I2_SYMMI (Dcd1A protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A813A3I2_SYMMI) HSP 1 Score: 100 bits (248), Expect = 6.690e-23 Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 7 VNIYNPKNYPTDGD-HPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQVAAMEASGNMHAAIYDWGSRTFYISNASPT-QDGPVVPAYERQFLSLD 309
V++YNPKN+P H RF DLV+VDKHVQPS H CL LM Q++G +D P A+QV+A+ +G++HAA+YD+ + IS PT DG PA+ + S+D
Sbjct: 218 VDVYNPKNFPVYPPYHDRFQDLVFVDKHVQPSHHMCLNELMHQYWGNLDAPGAVQVSAVHGTGDLHAAVYDYANDQMVIS--VPTFVDGSWRPAHASPWFSMD 318
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A0A5A8EIA4_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EIA4_CAFRO) HSP 1 Score: 100 bits (249), Expect = 1.340e-22 Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 7 VNIYNPKNYPTDGD-HPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQVAAMEASGNMHAAIYDWGSRTFYISNASPTQDGPVVPAYERQFLSLD 309
V++YNPKN+P H RF DLV+VDKHVQPS H CL LM Q++G +D P A+QV+A+ +G++HAA+YD+ + IS + DG PA+ + S+D
Sbjct: 312 VDVYNPKNFPVYPPYHDRFQDLVFVDKHVQPSHHMCLNELMHQYWGNLDAPGAVQVSAVHGTGDLHAAVYDYANDQMVIS-VTTFVDGSWRPAHASPWFSMD 412
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A0A5A8EJW6_CAFRO (Uncharacterized protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8EJW6_CAFRO) HSP 1 Score: 100 bits (248), Expect = 1.470e-22 Identity = 50/103 (48.54%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 7 VNIYNPKNYPTDGD-HPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQVAAMEASGNMHAAIYDWGSRTFYISNASPT-QDGPVVPAYERQFLSLD 309
V++YNPKN+P H RF DLV+VDKHVQPS H CL LM Q++G +D P A+QV+A+ +G++HAA+YD+ + IS PT DG PA+ + S+D
Sbjct: 285 VDVYNPKNFPVYPPYHDRFQDLVFVDKHVQPSHHMCLNELMHQYWGNLDAPGAVQVSAVHGTGDLHAAVYDYANDQMVIS--VPTFVDGSWRPAHASPWFSMD 385
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A0A5A8DQF9_CAFRO (Uncharacterized protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8DQF9_CAFRO) HSP 1 Score: 100 bits (249), Expect = 2.760e-22 Identity = 48/102 (47.06%), Postives = 68/102 (66.67%), Query Frame = 1
Query: 7 VNIYNPKNYPTDGD-HPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQVAAMEASGNMHAAIYDWGSRTFYISNASPTQDGPVVPAYERQFLSLD 309
V++YNPKN+P H RF DLV+VDKHVQPS H CL LM Q++G +D P A+QV+A+ +G++HAA+YD+ + IS + DG PA+ + S+D
Sbjct: 312 VDVYNPKNFPVYPPYHDRFQDLVFVDKHVQPSHHMCLNELMHQYWGNLDAPGAVQVSAVHGTGDLHAAVYDYANDQMVIS-VTTFVDGSWRPAHASPWFSMD 412
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A0A482RJ26_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RJ26_9ARCH) HSP 1 Score: 95.9 bits (237), Expect = 1.070e-21 Identity = 48/101 (47.52%), Postives = 64/101 (63.37%), Query Frame = 1
Query: 49 HPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQ-VAAMEASGNMHAAIYDWGSRTFYISNAS-PTQDGPVVPAYERQFLSLDMDTQLFDATLAH 345
H F DL++VDKHVQPS++ C LM Q+YGK+DGPT Q V + E +G+MH AI DW + YISNA G PAY R FL +M T L+ ++++
Sbjct: 172 HDLFTDLIFVDKHVQPSANPCFNNLMHQYYGKLDGPTIAQFVTSQEQTGDMHIAIMDWAQQFMYISNAGIANAAGSATPAYNRPFLRFNM-TSLWSTSMSN 271
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: A9UWH9_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UWH9_MONBE) HSP 1 Score: 95.9 bits (237), Expect = 7.180e-21 Identity = 54/125 (43.20%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 1 EYVNIYNPKNYPTD-GDHPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQ-VAAMEASGNMHAAIYDWGSRTFYISNAS---------PTQDGPVVPAYERQFLSLDMDTQLFDATLA 342
E V +Y+ KNYP+ HP FD LV+++KHVQPSS C+ +LM ++YG +D T I+ V ASG+MHAA YD+G+ ++S A DGP+ PA+ R + LDM+ +LF T A
Sbjct: 317 EEVLVYDDKNYPSYLPAHPLFDGLVFINKHVQPSSDTCMGSLMTKYYGSLDAETTIRNVLGNTASGDMHAAFYDYGNNVIHVSVAGLPVANDGNGTVIDGPMAPAHARPWFRLDME-KLFAQTQA 440
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: F0Z798_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z798_DICPU) HSP 1 Score: 95.5 bits (236), Expect = 9.210e-21 Identity = 46/117 (39.32%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 1 EYVNIYN-----PKNYPTDGDHPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQVAAMEASGNMHAAIYDWGSRTFYISNASPTQDGP-------VVPAYERQFLSLDMD 315
+YV +++ P PT HP+ D+VY+DK VQPS+HQCL +++Q+ +G ID I AA +G++H +YD+ FY+S TQ+GP +VPAY RQF+ +D++
Sbjct: 311 QYVRVFDDQTPFPAYAPTPAAHPQITDVVYIDKFVQPSNHQCLASVLQKSWGSIDATALINAAAQLQTGDLHIGLYDFAENQFYVSVG--TQEGPLGNPNITIVPAYARQFIQVDLN 425
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Match: DCD1A_DICDI (Protein dcd1A n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=DCD1A_DICDI) HSP 1 Score: 91.7 bits (226), Expect = 2.440e-19 Identity = 47/119 (39.50%), Postives = 69/119 (57.98%), Query Frame = 1
Query: 1 EYVNIYN-----PKNYPTDGDHPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDGPTAIQVAAMEASGNMHAAIYDWGSRTFYISNASPTQDGP--------VVPAYERQFLSLDMDT 318
EYV +++ P PT HP D+VY+DK VQPS+HQCL +++Q+ G ID + I AA +G++H IYD+ Y+S TQ GP +VPAY RQF+ +D+++
Sbjct: 321 EYVRVFDDQTPFPSYVPTPSAHPVIQDVVYIDKFVQPSNHQCLASVLQKSLGSIDVTSLINAAAQLQTGDIHIGIYDYQQNQMYVSVG--TQSGPYPPPSNFTIVPAYARQFIQIDLNS 437 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121044.4338.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig121044.4338.1 >prot_M-pyrifera_M_contig121044.4338.1 ID=prot_M-pyrifera_M_contig121044.4338.1|Name=mRNA_M-pyrifera_M_contig121044.4338.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=117bp EYVNIYNPKNYPTDGDHPRFDDLVYVDKHVQPSSHQCLPALMQQFYGKIDback to top mRNA from alignment at M-pyrifera_M_contig121044:2..352+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig121044.4338.1 ID=mRNA_M-pyrifera_M_contig121044.4338.1|Name=mRNA_M-pyrifera_M_contig121044.4338.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=351bp|location=Sequence derived from alignment at M-pyrifera_M_contig121044:2..352+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig121044:2..352+ >mRNA_M-pyrifera_M_contig121044.4338.1 ID=mRNA_M-pyrifera_M_contig121044.4338.1|Name=mRNA_M-pyrifera_M_contig121044.4338.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=702bp|location=Sequence derived from alignment at M-pyrifera_M_contig121044:2..352+ (Macrocystis pyrifera P11B4 male)back to top |