prot_M-pyrifera_M_contig120951.4306.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120951.4306.1
Unique Nameprot_M-pyrifera_M_contig120951.4306.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length175
Homology
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BLAST of mRNA_M-pyrifera_M_contig120951.4306.1 vs. uniprot
Match: A0A2E1DQA6_9RHOB (Autotransporter domain-containing protein (Fragment) n=1 Tax=Roseovarius sp. TaxID=1486281 RepID=A0A2E1DQA6_9RHOB)

HSP 1 Score: 66.6 bits (161), Expect = 1.310e-9
Identity = 54/144 (37.50%), Postives = 73/144 (50.69%), Query Frame = 0 
Query:   39 GIRTSTHDGATNIILGGNVSSGGDGIRATARGTGAVTIGGTGDVTGGTDAGD------DGIEINTASGDAVVSLNGTISGDPGIIMMS-SXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSIEVDRAGNIRGQSDGIHATISDKG 175
            GI T   DG T I LGG+V +  DGI A A GTGAVT+ GTG+VTG  DA        DGI+  T SGD  + + GTI+G PGI   S +                            G++ V+R G++ G ++GI A+++  G
Sbjct:  676 GIETVAEDGDTVITLGGDVVADADGINAVASGTGAVTVTGTGNVTG--DAAGTGNPAFDGIDAQTDSGDIRIDVAGTITGAPGINAQSLNGGNVEITGTGDVSDVVGAGILASTTGGNGNVTVNRDGSVDGGAEGIVASVAGTG 817
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120951.4306.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A2E1DQA6_9RHOB1.310e-937.50Autotransporter domain-containing protein (Fragmen... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120951contigM-pyrifera_M_contig120951:4..528 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120951.4306.1mRNA_M-pyrifera_M_contig120951.4306.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120951 4..528 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120951.4306.1 ID=prot_M-pyrifera_M_contig120951.4306.1|Name=mRNA_M-pyrifera_M_contig120951.4306.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=175bp
GAIGIDAEVRNAKGTGGTVAIRTNAAIGGSTGGNPALAGIRTSTHDGATN
IILGGNVSSGGDGIRATARGTGAVTIGGTGDVTGGTDAGDDGIEINTASG
DAVVSLNGTISGDPGIIMMSSAGGDLSVLGSGDVTGTAEAIKLSTAHGDG
SIEVDRAGNIRGQSDGIHATISDKG
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