mRNA_M-pyrifera_M_contig120831.4287.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A7K1ZET5_9ACTN (Glutamine synthetase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZET5_9ACTN) HSP 1 Score: 308 bits (789), Expect = 1.440e-101 Identity = 152/178 (85.39%), Postives = 159/178 (89.33%), Query Frame = 1
Query: 1 ALGYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
A GYSFFAAPEVEFFYFASGDPSLGKPQPLD ASYFDLTTADVSS+LRKRTIHMLE MGIP+EYSFHEDSPSQ EIDLRYTEALDVADN+MTLRLVVKKIA+E YA+FMPKPLNGVQGSGMH HLSLF N FHDG D +G SE RQFTAGVL HAREITAVTNQLVNSYKR+
Sbjct: 120 AQGYSFFAAPEVEFFYFASGDPSLGKPQPLDSASYFDLTTADVSSNLRKRTIHMLEAMGIPVEYSFHEDSPSQQEIDLRYTEALDVADNIMTLRLVVKKIAMESGTYASFMPKPLNGVQGSGMHVHLSLFSGDTNIFHDGSDAFGLSEVGRQFTAGVLHHAREITAVTNQLVNSYKRL 297
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A3M2GZP2_ACTSX (Type I glutamate--ammonia ligase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GZP2_ACTSX) HSP 1 Score: 289 bits (739), Expect = 5.170e-94 Identity = 142/176 (80.68%), Postives = 155/176 (88.07%), Query Frame = 1
Query: 7 GYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
G++ FAAPEVEFFYF + D + G+P PLDRASYFDLTTADV+SDLR+ TIHMLE MGIP+EYSFHEDSPSQHEIDLRYTEALD+ADN+MTLRLVVKKIALE +ATFMPKPLNGVQGSGMHTHLSLF DNAFH DDP G S TAR F AG+LRHAREITAVTNQLVNSYKR+
Sbjct: 122 GFTLFAAPEVEFFYFDADDVAEGRPVPLDRASYFDLTTADVASDLRRTTIHMLEAMGIPVEYSFHEDSPSQHEIDLRYTEALDMADNVMTLRLVVKKIALEHGVHATFMPKPLNGVQGSGMHTHLSLFAGDDNAFHADDDPLGLSATARAFMAGILRHAREITAVTNQLVNSYKRL 297
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A358A1E9_9ACTN (Type I glutamate--ammonia ligase n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A1E9_9ACTN) HSP 1 Score: 288 bits (736), Expect = 1.470e-93 Identity = 140/176 (79.55%), Postives = 153/176 (86.93%), Query Frame = 1
Query: 7 GYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
GY+FF APE EFFYF SG+ G P+P+D ASYFDLTTADVSSDLRK TIHMLE MGIP+EYSFHEDSPSQHEIDLRYTEAL +ADN+MTLRLVVKKIA++R YATFMPKPLNGVQGSGMHTHLSLF+ NAFHD DD G S +QFTAGVL+HAREITAVTNQLVNSYKR+
Sbjct: 122 GYTFFVAPEAEFFYFESGETEGGAPKPIDHASYFDLTTADVSSDLRKTTIHMLEAMGIPVEYSFHEDSPSQHEIDLRYTEALSMADNIMTLRLVVKKIAMDRGVYATFMPKPLNGVQGSGMHTHLSLFEGETNAFHDADDEGGLSVVGKQFTAGVLKHAREITAVTNQLVNSYKRL 297
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A2E5P0Y7_9ACTN (Type I glutamate--ammonia ligase n=7 Tax=root TaxID=1 RepID=A0A2E5P0Y7_9ACTN) HSP 1 Score: 277 bits (708), Expect = 3.010e-89 Identity = 136/178 (76.40%), Postives = 152/178 (85.39%), Query Frame = 1
Query: 1 ALGYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
A+G+ F APEVEFFYFA D S P PLDRASYFDLTT DV+SDLRK+T+HMLE + IP+EYSFHEDSPSQHEIDL+YT+AL +AD++MTLRL VKKIA++R YATFMPKPLNGVQGSGMHTHLSLF+DG NAFHD DP G SE AR F AG+L HAREITAVTNQLVNSYKRI
Sbjct: 128 AIGFDMFCAPEVEFFYFADTDTSTA-PVPLDRASYFDLTTTDVASDLRKQTLHMLEALSIPVEYSFHEDSPSQHEIDLQYTDALSMADSVMTLRLAVKKIAMDRGVYATFMPKPLNGVQGSGMHTHLSLFQDGQNAFHDPGDPDGLSEVARAFIAGLLHHAREITAVTNQLVNSYKRI 304
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A538D512_9ACTN (Type I glutamate--ammonia ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538D512_9ACTN) HSP 1 Score: 276 bits (707), Expect = 3.390e-89 Identity = 135/176 (76.70%), Postives = 153/176 (86.93%), Query Frame = 1
Query: 7 GYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
G++FF APEVEFFYFASGDP +PQPLDRASYFDLTT DVSSD RKRT+HMLE +GIP+E+SFHEDS SQHEIDL+Y+EAL +ADN+MTLRLVV+K+ALE YATFMPKPLNGVQGSGMHTH+SLF+ NAFHD D YG S+ R F AG+LRHAREITAVTNQLVNSYKR+
Sbjct: 122 GFTFFTAPEVEFFYFASGDPKQ-EPQPLDRASYFDLTTVDVSSDQRKRTLHMLERLGIPVEFSFHEDSSSQHEIDLQYSEALSMADNVMTLRLVVRKVALENGVYATFMPKPLNGVQGSGMHTHMSLFEGESNAFHDPSDEYGLSKVGRCFIAGLLRHAREITAVTNQLVNSYKRL 296
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A6G2KMB0_9ACTN (Type I glutamate--ammonia ligase n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2KMB0_9ACTN) HSP 1 Score: 275 bits (702), Expect = 1.920e-88 Identity = 136/178 (76.40%), Postives = 155/178 (87.08%), Query Frame = 1
Query: 4 LGYSFFAAPEVEFFYFASGDPSLGKPQ-PLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
+GY+F+ APEVEFFYF GDP +P PLD ASYFDLTTADV+S LRKRTI MLE MGIP+EYSFHEDSPSQHEIDLRYTEAL +ADN+MTLRLVV+K+AL+RD +ATFMPKPLNGVQGSGMHTH+SLF++ NAFHD D YG S+TA+ F AG+L HAREITAVTNQLVNSYKR+
Sbjct: 121 MGYTFYTAPEVEFFYFRHGDPE--QPLVPLDNASYFDLTTADVASPLRKRTITMLEAMGIPVEYSFHEDSPSQHEIDLRYTEALSMADNVMTLRLVVRKLALDRDLHATFMPKPLNGVQGSGMHTHMSLFENDVNAFHDAGDDYGLSKTAKAFIAGLLHHAREITAVTNQLVNSYKRL 296
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A7Y2DDK8_9ACTN (Type I glutamate--ammonia ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DDK8_9ACTN) HSP 1 Score: 274 bits (701), Expect = 2.420e-88 Identity = 134/176 (76.14%), Postives = 151/176 (85.80%), Query Frame = 1
Query: 7 GYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
G++FF APEVEFFYFA DPS PQP+D+ASYFDLTTADVSSDLRK T+HMLE + IP+EYSFHEDSPSQHEIDLRY +AL +ADN+MTLRLVVKKIA+ER YATFMPKPLN VQGSGMHTHLSLF+ NAFHD DP+G S+ + F AG+L HAREITAVTNQLVNSYKR+
Sbjct: 118 GFNFFCAPEVEFFYFADNDPSHA-PQPIDQASYFDLTTADVSSDLRKTTLHMLEALSIPVEYSFHEDSPSQHEIDLRYNDALTMADNIMTLRLVVKKIAMERGVYATFMPKPLNHVQGSGMHTHLSLFEGDKNAFHDDADPHGLSKEGQAFVAGLLHHAREITAVTNQLVNSYKRL 292
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A7K2D9L4_9ACTN (Type I glutamate--ammonia ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2D9L4_9ACTN) HSP 1 Score: 274 bits (700), Expect = 3.850e-88 Identity = 132/176 (75.00%), Postives = 149/176 (84.66%), Query Frame = 1
Query: 7 GYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
GY F APEVEFFYF S DP+ G+PQPLD+ASYFDLTT DV+S LR+ T+HMLE MGI +EYSFHEDSPSQHEIDLRYTEAL++ADN+MTLRLVVK+IA+ YATF+PKPLNGVQGSGMHTH+SLF++G NAFHD DD G S R F AGVL HAREITAV NQLVNSYKR+
Sbjct: 122 GYEFMTAPEVEFFYFESDDPADGRPQPLDQASYFDLTTLDVASGLRRSTLHMLEAMGIGVEYSFHEDSPSQHEIDLRYTEALEMADNVMTLRLVVKRIAMAHGAYATFIPKPLNGVQGSGMHTHMSLFREGANAFHDADDGAGVSPVGRHFMAGVLTHAREITAVANQLVNSYKRL 297
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A6I3C3Y3_9ACTN (Glutamine synthetase n=2 Tax=root TaxID=1 RepID=A0A6I3C3Y3_9ACTN) HSP 1 Score: 273 bits (698), Expect = 7.710e-88 Identity = 133/176 (75.57%), Postives = 154/176 (87.50%), Query Frame = 1
Query: 7 GYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
G++FF APEVEFFYFA GDPS +PQPLDRASYFDLTTADV+SDLR+RT+HMLE +GIP+EYSFHEDSPSQHEIDL+Y+EAL +ADN+MTLRLVV+KIAL+ +ATFMPKPLNGVQGSGMHTHLSLF+ N F+D DD G S TAR F AG+L HA E+TA+TNQLVNSYKR+
Sbjct: 122 GFTFFTAPEVEFFYFADGDPSK-EPQPLDRASYFDLTTADVASDLRRRTLHMLEALGIPVEYSFHEDSPSQHEIDLQYSEALSMADNIMTLRLVVRKIALDAGVWATFMPKPLNGVQGSGMHTHLSLFRGEQNVFYDPDDESGLSATARSFIAGLLVHACEMTAITNQLVNSYKRL 296
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Match: A0A800IBN9_9ACTN (Glutamine synthetase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800IBN9_9ACTN) HSP 1 Score: 271 bits (694), Expect = 3.880e-87 Identity = 133/178 (74.72%), Postives = 152/178 (85.39%), Query Frame = 1
Query: 1 ALGYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRTIHMLEGMGIPIEYSFHEDSPSQHEIDLRYTEALDVADNLMTLRLVVKKIALERDCYATFMPKPLNGVQGSGMHTHLSLFKDGDNAFHDGDDPYGWSETARQFTAGVLRHAREITAVTNQLVNSYKRI 534
A G+ F APEVEFFYFA+ DPS PQPLD+ASYFDLTTADVSSDLRKRT+HMLE + IP+EYSFHEDSPSQHEIDL+YT+A+++AD++MTLRL VKKIA+E YATFMPKPLNGVQGSGMHTHLSLF++ NAFHD D G S TA F AG+L HAREI+AVTNQL+NSYKRI
Sbjct: 128 AAGFEMFCAPEVEFFYFANNDPS-APPQPLDQASYFDLTTADVSSDLRKRTLHMLEALSIPVEYSFHEDSPSQHEIDLQYTDAMNMADSIMTLRLAVKKIAMESGVYATFMPKPLNGVQGSGMHTHLSLFRNDVNAFHDPDAADGLSPTAHSFIAGLLHHAREISAVTNQLINSYKRI 304 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120831.4287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120831.4287.1 >prot_M-pyrifera_M_contig120831.4287.1 ID=prot_M-pyrifera_M_contig120831.4287.1|Name=mRNA_M-pyrifera_M_contig120831.4287.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp ALGYSFFAAPEVEFFYFASGDPSLGKPQPLDRASYFDLTTADVSSDLRKRback to top mRNA from alignment at M-pyrifera_M_contig120831:3..536- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120831.4287.1 ID=mRNA_M-pyrifera_M_contig120831.4287.1|Name=mRNA_M-pyrifera_M_contig120831.4287.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig120831:3..536- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120831:3..536- >mRNA_M-pyrifera_M_contig120831.4287.1 ID=mRNA_M-pyrifera_M_contig120831.4287.1|Name=mRNA_M-pyrifera_M_contig120831.4287.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig120831:3..536- (Macrocystis pyrifera P11B4 male)back to top |