prot_M-pyrifera_M_contig120795.4277.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120795.4277.1
Unique Nameprot_M-pyrifera_M_contig120795.4277.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length101
Homology
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: F5RHF2_METUF (Polysaccharide chain length determinant protein, PEP-CTERM locus subfamily n=3 Tax=Methyloversatilis universalis TaxID=378211 RepID=F5RHF2_METUF)

HSP 1 Score: 58.5 bits (140), Expect = 7.800e-8
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0
Query:    5 VLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAIS-LASNRRQQSERRMEMAVFGAVLAGLVFVYIGLLSIDS 83
            VL  ++ VGVA SF++SQL P FH    L E A +P+LG++S L +N R++ ERR     FG  L GLV  Y+ +L+  S
Sbjct:  442 VLAASMLVGVAASFVVSQLRPVFHDGRALAEVAGVPVLGSVSMLLANERKRYERRRTFVFFGG-LGGLVAAYVAMLAFVS 520          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: UPI00082CBBDA (hypothetical protein n=1 Tax=Marinobacterium profundum TaxID=1714300 RepID=UPI00082CBBDA)

HSP 1 Score: 57.8 bits (138), Expect = 1.460e-7
Identity = 31/92 (33.70%), Postives = 56/92 (60.87%), Query Frame = 0
Query:    5 VLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFVYIGLLSIDSTEFDLHAKLVQLV 96
            VL GA+G+G+A++FL+SQL P F    +L +    P+LG I++  ++   +++R E+ +FGA+ AG +  + G+L       D + +L+  V
Sbjct:  439 VLAGAVGIGIAVAFLISQLRPVFFNSKQLFQVTGYPVLGVITMIKDKEFLNQKRREIRLFGAI-AGSLLAFYGMLIFLQMLPDANQQLLAYV 529          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: A0A1A9EXB4_9GAMM (Uncharacterized protein n=3 Tax=Marinobacterium TaxID=48075 RepID=A0A1A9EXB4_9GAMM)

HSP 1 Score: 57.4 bits (137), Expect = 1.990e-7
Identity = 34/92 (36.96%), Postives = 54/92 (58.70%), Query Frame = 0
Query:    5 VLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFVYIGLLSIDSTEFDLHAKLVQLV 96
            VLVGA+G+G+ ++FL+SQL P F  P +L +    P+LG IS+  +    S++R E  +F A LAG +  + G+L       D + +L+  V
Sbjct:  415 VLVGAMGIGIGVAFLISQLRPVFFDPKQLFQATGYPVLGVISMIRDPELLSQKRREARLFIA-LAGSLLTFYGMLMFLQLLPDANQQLLAYV 505          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: A0A4S4AUQ2_9RHOO (Chain length-determining protein n=1 Tax=Azoarcus nasutitermitis TaxID=2565930 RepID=A0A4S4AUQ2_9RHOO)

HSP 1 Score: 55.8 bits (133), Expect = 6.890e-7
Identity = 28/63 (44.44%), Postives = 38/63 (60.32%), Query Frame = 0
Query:    8 GALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAG 70
            GALG GVAL+FL+SQL P F     L+EF  +P+LG +SL  + R+ +  R     F   +AG
Sbjct:  435 GALGAGVALTFLISQLRPTFADSRALREFTGIPVLGTVSLLGDPRRDARARRGRIAFAGGVAG 497          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: UPI001CBCE028 (Wzz/FepE/Etk N-terminal domain-containing protein n=2 Tax=Massilia TaxID=149698 RepID=UPI001CBCE028)

HSP 1 Score: 55.1 bits (131), Expect = 1.280e-6
Identity = 31/78 (39.74%), Postives = 47/78 (60.26%), Query Frame = 0
Query:    3 SLVLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFVYIGLLS 80
            S+V + ALG G+ ++FL+SQL P F     L+E   LP+LGAIS+     Q+ +RR  +  F A +  L  VY G+++
Sbjct:  426 SVVFLIALGAGLGVAFLMSQLRPTFMAQSTLREATGLPVLGAISMNWTAEQKVKRRSRLYAFSAAVVVLFGVYGGVMA 503          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: A0A521ZD57_9BURK (Chain length-determining protein n=1 Tax=Burkholderiaceae bacterium TaxID=2030806 RepID=A0A521ZD57_9BURK)

HSP 1 Score: 53.9 bits (128), Expect = 3.270e-6
Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    6 LVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFVY 75
            LVGALG G+A++ LLSQ+ P +   + L+E   LP+LG ++L     Q+  RR  + +F +   GLVF Y
Sbjct:  430 LVGALGGGIAVALLLSQIRPTYGNRNSLREDLGLPVLGTVALIWTPAQKLLRRRSLLLFLSGTGGLVFCY 499          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: A0A4R6E931_9RHOO (Polysaccharide chain length determinant protein (PEP-CTERM system associated) n=2 Tax=Azoarcus TaxID=12960 RepID=A0A4R6E931_9RHOO)

HSP 1 Score: 53.1 bits (126), Expect = 6.110e-6
Identity = 32/71 (45.07%), Postives = 41/71 (57.75%), Query Frame = 0
Query:    6 LVGALG--VGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFV 74
            LVG +G  VGVAL+FL+SQL P F     L+E   LP+LGA+SL     +   RR  +  F   +AG V V
Sbjct:  433 LVGLVGLAVGVALTFLISQLRPAFSDGRTLREVTGLPVLGAVSLLQTPERAKARRRGLLAFSGGVAGFVGV 503          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: A0A3A4RPM3_9BURK (Chain length-determining protein n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A3A4RPM3_9BURK)

HSP 1 Score: 53.1 bits (126), Expect = 6.110e-6
Identity = 29/71 (40.85%), Postives = 41/71 (57.75%), Query Frame = 0
Query:    4 LVLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFV 74
            LVLV ALG G+ ++FL+SQ+ P F   + L+    LP+LG ++L  N   +   R  +  FGA L  LV V
Sbjct:  433 LVLVVALGAGLGVTFLMSQIRPVFFDANALRSATDLPLLGVVTLVRNDTIRRHERSSLMRFGAALGALVLV 503          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: A0A1P8UI16_9GAMM (Uncharacterized protein n=1 Tax=Acidihalobacter ferrooxydans TaxID=1765967 RepID=A0A1P8UI16_9GAMM)

HSP 1 Score: 52.8 bits (125), Expect = 8.330e-6
Identity = 31/70 (44.29%), Postives = 43/70 (61.43%), Query Frame = 0
Query:    5 VLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFV 74
            VLVGALG G+A ++LL+ L P F T  +L E   LP++GA+SLA+       RR+   V G  LA +V +
Sbjct:  422 VLVGALGAGLAFAYLLALLKPVFMTRSDLSETLGLPVIGAVSLAATNSYLRARRV--GVMGFALATIVLL 489          
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Match: A0A4Y9SB50_9BURK (Chain length-determining protein n=1 Tax=Massilia arenosa TaxID=2561931 RepID=A0A4Y9SB50_9BURK)

HSP 1 Score: 52.0 bits (123), Expect = 1.550e-5
Identity = 29/79 (36.71%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    3 SLVLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASNRRQQSERRMEMAVFGAVLAGLVFVYIGLLSI 81
            S+VLV ALG G+ ++ L+SQ+ P F +   L++   LPILGAI +     Q+  R+  +  F A +  L  +Y G+++I
Sbjct:  425 SVVLVVALGAGLGIALLMSQIRPTFLSQSALRDVTGLPILGAIGMNWTDEQKVRRKRRLYAFSASVVMLFGLYAGVMAI 503          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120795.4277.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
F5RHF2_METUF7.800e-845.00Polysaccharide chain length determinant protein, P... [more]
UPI00082CBBDA1.460e-733.70hypothetical protein n=1 Tax=Marinobacterium profu... [more]
A0A1A9EXB4_9GAMM1.990e-736.96Uncharacterized protein n=3 Tax=Marinobacterium Ta... [more]
A0A4S4AUQ2_9RHOO6.890e-744.44Chain length-determining protein n=1 Tax=Azoarcus ... [more]
UPI001CBCE0281.280e-639.74Wzz/FepE/Etk N-terminal domain-containing protein ... [more]
A0A521ZD57_9BURK3.270e-641.43Chain length-determining protein n=1 Tax=Burkholde... [more]
A0A4R6E931_9RHOO6.110e-645.07Polysaccharide chain length determinant protein (P... [more]
A0A3A4RPM3_9BURK6.110e-640.85Chain length-determining protein n=1 Tax=Comamonad... [more]
A0A1P8UI16_9GAMM8.330e-644.29Uncharacterized protein n=1 Tax=Acidihalobacter fe... [more]
A0A4Y9SB50_9BURK1.550e-536.71Chain length-determining protein n=1 Tax=Massilia ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..100
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 25..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..24
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..81
NoneNo IPR availableTMHMMTMhelixcoord: 4..21
NoneNo IPR availableTMHMMTMhelixcoord: 62..81

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120795contigM-pyrifera_M_contig120795:234..536 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120795.4277.1mRNA_M-pyrifera_M_contig120795.4277.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120795 234..536 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120795.4277.1 ID=prot_M-pyrifera_M_contig120795.4277.1|Name=mRNA_M-pyrifera_M_contig120795.4277.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=101bp
FVSLVLVGALGVGVALSFLLSQLNPRFHTPDELKEFARLPILGAISLASN
RRQQSERRMEMAVFGAVLAGLVFVYIGLLSIDSTEFDLHAKLVQLVDRQS
*
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