mRNA_M-pyrifera_M_contig120741.4271.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig120741.4271.1
Unique NamemRNA_M-pyrifera_M_contig120741.4271.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: R1GSM0_BOTPV (Putative duf726 domain protein n=1 Tax=Botryosphaeria parva (strain UCR-NP2) TaxID=1287680 RepID=R1GSM0_BOTPV)

HSP 1 Score: 154 bits (389), Expect = 1.810e-42
Identity = 73/149 (48.99%), Postives = 103/149 (69.13%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKRNAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHR-TANYTRSIAGLGPVECEDVENWNLTHIVKGHLLYKQKIGKILAEV 444
            NPWNV   RA   G ++A +LI++  G RP TLVGFS G+R+IFYCL+EL KR A G+V+NVFLFG+ + A    +   RSVV+GR VNGY T DW+LG L R T+     +AGL PV+ + +EN+N+T +V GH+ Y+  + +++ E+
Sbjct:   48 NPWNVSLARAELAGLILADSLIDRNLGVRPATLVGFSLGSRVIFYCLQELAKRGAYGLVQNVFLFGSPIVAKKDEYLKARSVVAGRFVNGYATNDWILGYLFRATSGGIMKVAGLNPVDAQGIENYNVTELVNGHMAYRAAMPRLMREM 196          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: E3MRX8_CAERE (Uncharacterized protein n=4 Tax=Caenorhabditis TaxID=6237 RepID=E3MRX8_CAERE)

HSP 1 Score: 151 bits (381), Expect = 2.780e-42
Identity = 74/152 (48.68%), Postives = 105/152 (69.08%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKRN-AVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPVE---CEDVENWNLTHIVKGHLLYKQKIGKILAEV 444
            NPWNV   RA + G  +A  L+ + HG+RP+TL+GFS GAR+IF+CL  + KR+ +VGI+E+V L GA VTA    W  + SVVSGR++NGY  TDW+L  L+RT +    IAG GPV+    + + N+NL+HIVKGH+ Y +++ ++L  V
Sbjct:   82 NPWNVCVSRAAEVGEHLAEVLLSRSHGKRPITLIGFSLGARVIFHCLLTMSKRSESVGIIEDVILLGAPVTASPKEWSKVCSVVSGRVINGYCETDWLLRFLYRTMSAQFRIAGTGPVDNRNSKKIYNYNLSHIVKGHMDYSKRLTEVLHAV 233          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A507E063_9FUNG (Uncharacterized protein n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507E063_9FUNG)

HSP 1 Score: 156 bits (394), Expect = 6.300e-42
Identity = 72/145 (49.66%), Postives = 103/145 (71.03%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKRNAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPVECEDVENWNLTHIVKGHLLYKQKIGKIL 435
            NPW+   E A+K G ++A  LIE+V G RP+TL+G+S GAR+IFYCLEEL +RNA GIVE+ ++FG         W+ +R +V+GR+VNGY++ DW+LG L+RT+N    + GL  VE + VE++++  IV+GHL Y+  IGK L
Sbjct:  373 NPWSNAMELAKKAGVVLADVLIEKVQGERPITLIGYSLGARVIFYCLEELSRRNAYGIVEHAYMFGLPGPGTKDLWKGVRRIVAGRVVNGYSSNDWLLGFLYRTSNIKLMVPGLQAVEVDGVEDFDVGSIVEGHLKYRGTIGKCL 517          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A1Y1Y7D7_9FUNG (DUF726-domain-containing protein (Fragment) n=1 Tax=Basidiobolus meristosporus CBS 931.73 TaxID=1314790 RepID=A0A1Y1Y7D7_9FUNG)

HSP 1 Score: 148 bits (373), Expect = 6.510e-42
Identity = 72/139 (51.80%), Postives = 97/139 (69.78%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKRNAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPV-ECEDVENWNLTHIVKGHLLYK 414
            NPW++  ++A+K G ++A TL+  V G RPV+LVGFS GAR+IFYCL EL + NA GIVE+VFLFG  VTA   +W+    VVSGR VNGY  +DWVLG L+R +   R IAGL P+ +   ++N +LT ++ GH  Y+
Sbjct:   93 NPWSIGLDKAQKAGLVLADTLLNHVQGHRPVSLVGFSLGARVIFYCLLELARVNAYGIVEDVFLFGTPVTASTKQWKQCAGVVSGRFVNGYVKSDWVLGFLYRASAAGRPIAGLRPITDVPRLDNVDLTDMINGHFQYR 231          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A0C2GW95_9BILA (Uncharacterized protein n=1 Tax=Ancylostoma duodenale TaxID=51022 RepID=A0A0C2GW95_9BILA)

HSP 1 Score: 149 bits (375), Expect = 7.350e-42
Identity = 73/152 (48.03%), Postives = 105/152 (69.08%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKR-NAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPVECED---VENWNLTHIVKGHLLYKQKIGKILAEV 444
            NPWNV   RA + G  +A  L+ + HG+RP++LVGFS GAR+I++CL  + KR  + GI+E+V L GA V+A   +W  + +VV GR++NGY  TDW+L  L+RT +   +IAG GPVE +    + N+NL+HIVKGHL Y +K+ ++LA V
Sbjct:   44 NPWNVCVARAAEVGEHLAELLLSRSHGKRPISLVGFSLGARVIYHCLLAMSKRAESAGIIEDVILLGAPVSASPKQWAQLCTVVGGRVINGYCETDWLLRFLYRTMSVQFTIAGTGPVEDKSNKKIFNYNLSHIVKGHLDYSRKLSEVLAAV 195          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A1I8CVQ7_9BILA (Uncharacterized protein n=1 Tax=Rhabditophanes sp. KR3021 TaxID=114890 RepID=A0A1I8CVQ7_9BILA)

HSP 1 Score: 155 bits (392), Expect = 7.670e-42
Identity = 78/151 (51.66%), Postives = 109/151 (72.19%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKR-NAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPVECED-----VENWNLTHIVKGHLLYKQKIGKIL 435
            NPWNV   R+ + G  +A TLI++VHG++PVTL+G+S GAR+IFYCL +L +R N+ GI+ENV L GA VTA  ++W +   VVSGR++NGY   DW+L  L+RT +   SIAG+ PV+ ++     V N+NL+HIVKGHL Y +K+ +IL
Sbjct:  382 NPWNVCIARSVEIGFHLAETLIKRVHGQKPVTLIGYSLGARVIFYCLLKLSERKNSRGIIENVILLGAPVTASQTQWEEASKVVSGRIINGYCKNDWMLKFLYRTMSAQMSIAGIAPVKFKNSNRNKVANYNLSHIVKGHLDYAEKLEEIL 532          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A507ELR5_9FUNG (Uncharacterized protein n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A507ELR5_9FUNG)

HSP 1 Score: 155 bits (392), Expect = 1.110e-41
Identity = 73/146 (50.00%), Postives = 100/146 (68.49%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKRNAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPVECEDVENWNLTHIVKGHLLYKQKIGKILA 438
            NPW+   + A+K G ++A  LIE+V G RP+TL+G+S GAR IFYCL EL +R+A GIVE+ ++FG         WR IR VVSGR+VNGY+T DW+L  L+RT N    + GL PV+   VE+ +++ IV+GHL Y+  IG+ LA
Sbjct:  384 NPWSNAMDLAKKTGAVLADVLIEKVQGERPITLIGYSLGARTIFYCLVELSRRHAYGIVEHAYMFGLPAPGSRDYWRSIRRVVSGRIVNGYSTNDWLLAFLYRTTNIKYMVPGLSPVKVRGVEDIDVSSIVEGHLKYRGAIGQCLA 529          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A6V7YBX7_9BILA (Hypothetical protein (Fragment) n=3 Tax=Meloidogyne enterolobii TaxID=390850 RepID=A0A6V7YBX7_9BILA)

HSP 1 Score: 156 bits (394), Expect = 1.130e-41
Identity = 76/153 (49.67%), Postives = 109/153 (71.24%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKRN--AVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPVECED---VENWNLTHIVKGHLLYKQKIGKILAEV 444
            NPWN+  +RA + G  +A  L+ + HGRRP+TL+GFS GAR+I++CL E+ KR   ++GIVE+V L GA V+A  S+WR I SVV GR++NGY  TDW+L  L+RT +    IAG GPV+ ++   + N+NL+HIVKGH+ Y +K+ ++L  V
Sbjct:  409 NPWNICTKRAAEAGEHLAEVLLTRSHGRRPITLIGFSLGARVIYHCLMEMNKRKPYSLGIVEDVILLGAPVSASPSQWRQICSVVGGRVINGYCKTDWLLRFLYRTMSVQFVIAGTGPVDNKNERKIVNFNLSHIVKGHMDYSKKLTRVLESV 561          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A066VPE7_TILAU (DUF726-domain-containing protein n=1 Tax=Tilletiaria anomala (strain ATCC 24038 / CBS 436.72 / UBC 951) TaxID=1037660 RepID=A0A066VPE7_TILAU)

HSP 1 Score: 156 bits (395), Expect = 2.150e-41
Identity = 76/152 (50.00%), Postives = 108/152 (71.05%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKRNAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHR-TANYTRSIAGLGPVEC-EDVENWNLTHIVKGHLLYKQKIGKILAEVRF 450
            NPW+   +RAR  G ++A  L ++  G RP+TLVGFS GAR+I+Y L EL ++N+ GIV+NV+L GA V+A+   W ++RSVVSGR VNGY+T+DW+LG LHR T     ++AGL P++   D++N +LTHIV GHL Y+  +  +L E+ F
Sbjct:  847 NPWSNALDRARAAGLILADVLSKKQMGARPITLVGFSLGARVIYYALTELYRKNSFGIVQNVYLIGAPVSANVKNWTEVRSVVSGRFVNGYSTSDWILGYLHRATTGGLSTVAGLHPIQIVPDIDNVDLTHIVPGHLAYRALMPLVLGELGF 998          
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Match: A0A7E4USN5_PANRE (Uncharacterized protein n=1 Tax=Panagrellus redivivus TaxID=6233 RepID=A0A7E4USN5_PANRE)

HSP 1 Score: 154 bits (390), Expect = 2.630e-41
Identity = 75/152 (49.34%), Postives = 109/152 (71.71%), Query Frame = 1
Query:    1 NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEELKKR-NAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGLLHRTANYTRSIAGLGPVECE---DVENWNLTHIVKGHLLYKQKIGKILAEV 444
            NPWNV   RA + G  +A  L+ + HG+RP+TL+GFS GAR+I++CL  + KR +AVGI+E+V L GA V+A  S+W+ I +VV GR++NGY T+DW+L  L+RT +   +IAG GPVE +    + N+NL+HIVKGH+ Y +K+ ++L  V
Sbjct:  414 NPWNVCVSRAAEVGEHLAEVLLTRQHGKRPITLIGFSLGARVIYHCLLSMSKRPDAVGIIEDVVLLGAPVSASPSQWKQICTVVGGRVINGYCTSDWLLKFLYRTMSVQFTIAGTGPVESKFERKIVNFNLSHIVKGHMDYSKKLTEVLEAV 565          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120741.4271.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
R1GSM0_BOTPV1.810e-4248.99Putative duf726 domain protein n=1 Tax=Botryosphae... [more]
E3MRX8_CAERE2.780e-4248.68Uncharacterized protein n=4 Tax=Caenorhabditis Tax... [more]
A0A507E063_9FUNG6.300e-4249.66Uncharacterized protein n=1 Tax=Powellomyces hirtu... [more]
A0A1Y1Y7D7_9FUNG6.510e-4251.80DUF726-domain-containing protein (Fragment) n=1 Ta... [more]
A0A0C2GW95_9BILA7.350e-4248.03Uncharacterized protein n=1 Tax=Ancylostoma duoden... [more]
A0A1I8CVQ7_9BILA7.670e-4251.66Uncharacterized protein n=1 Tax=Rhabditophanes sp.... [more]
A0A507ELR5_9FUNG1.110e-4150.00Uncharacterized protein n=2 Tax=Spizellomyces TaxI... [more]
A0A6V7YBX7_9BILA1.130e-4149.67Hypothetical protein (Fragment) n=3 Tax=Meloidogyn... [more]
A0A066VPE7_TILAU2.150e-4150.00DUF726-domain-containing protein n=1 Tax=Tilletiar... [more]
A0A7E4USN5_PANRE2.630e-4149.34Uncharacterized protein n=1 Tax=Panagrellus redivi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120741contigM-pyrifera_M_contig120741:81..530 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score161.8
Seed ortholog evalue2.5e-37
Seed eggNOG ortholog109760.SPPG_05238T0
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0006810,GO:0008150,GO:0016192,GO:0016298,GO:0016787,GO:0016788,GO:0051179,GO:0051234
EggNOG free text desc.domain-containing protein
EggNOG OGs38DI9@33154,3NYP3@4751,KOG2385@1,KOG2385@2759
COG Functional cat.S
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons1
Model size450
Cds size450
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815727.0103657-CDS-M-pyrifera_M_contig120741:80..5301622815727.0103657-CDS-M-pyrifera_M_contig120741:80..530Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120741 81..530 -
1692277540.857436-CDS-M-pyrifera_M_contig120741:80..5301692277540.857436-CDS-M-pyrifera_M_contig120741:80..530Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120741 81..530 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120741.4271.1prot_M-pyrifera_M_contig120741.4271.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig120741 81..530 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig120741.4271.1

>prot_M-pyrifera_M_contig120741.4271.1 ID=prot_M-pyrifera_M_contig120741.4271.1|Name=mRNA_M-pyrifera_M_contig120741.4271.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=150bp
NPWNVVAERARKCGRLMAATLIEQVHGRRPVTLVGFSHGARLIFYCLEEL
KKRNAVGIVENVFLFGAAVTADASRWRDIRSVVSGRLVNGYTTTDWVLGL
LHRTANYTRSIAGLGPVECEDVENWNLTHIVKGHLLYKQKIGKILAEVRF
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mRNA from alignment at M-pyrifera_M_contig120741:81..530-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig120741.4271.1 ID=mRNA_M-pyrifera_M_contig120741.4271.1|Name=mRNA_M-pyrifera_M_contig120741.4271.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig120741:81..530- (Macrocystis pyrifera P11B4 male)
AACCCATGGAACGTTGTTGCTGAGCGTGCGAGGAAGTGTGGGAGATTGAT GGCGGCCACTTTGATCGAGCAAGTGCACGGCAGGAGGCCCGTGACCCTGG TGGGCTTCTCCCACGGCGCTCGCCTCATTTTCTACTGTCTTGAAGAGCTG AAGAAGAGGAATGCAGTGGGGATTGTGGAGAACGTCTTCCTCTTCGGCGC TGCTGTCACTGCTGACGCCTCCCGATGGAGAGATATCAGGAGCGTCGTCT CTGGCAGATTGGTGAACGGCTACACGACCACCGACTGGGTGCTGGGCCTC CTGCATCGCACTGCCAATTACACGAGGTCGATTGCTGGCCTTGGTCCCGT GGAATGCGAAGATGTCGAGAACTGGAACCTCACCCACATCGTGAAGGGCC ATCTCCTCTACAAGCAGAAGATTGGCAAAATCCTCGCCGAGGTGCGCTTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig120741:81..530-

>mRNA_M-pyrifera_M_contig120741.4271.1 ID=mRNA_M-pyrifera_M_contig120741.4271.1|Name=mRNA_M-pyrifera_M_contig120741.4271.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=900bp|location=Sequence derived from alignment at M-pyrifera_M_contig120741:81..530- (Macrocystis pyrifera P11B4 male)
AACCCATGGAACGTTGTTGCTGAGCGTGCGAGGAAGTGTGGGAGATTGAT
GGCGGCCACTTTGATCGAGCAAGTGCACGGCAGGAGGCCCGTGACCCTGG
TGGGCTTCTCCCACGGCGCTCGCCTCATTTTCTACTGTCTTGAAGAGCTG
AAGAAGAGGAATGCAGTGGGGATTGTGGAGAACGTCTTCCTCTTCGGCGC
TGCTGTCACTGCTGACGCCTCCCGATGGAGAGATATCAGGAGCGTCGTCT
CTGGCAGATTGGTGAACGGCTACACGACCACCGACTGGGTGCTGGGCCTC
CTGCATCGCACTGCCAATTACACGAGGTCGATTGCTGGCCTTGGTCCCGT
GGAATGCGAAGATGTCGAGAACTGGAACCTCACCCACATCGTGAAGGGCC
ATCTCCTCTACAAGCAGAAGATTGGCAAAATCCTCGCCGAGGTGCGCTTC
AACCCATGGAACGTTGTTGCTGAGCGTGCGAGGAAGTGTGGGAGATTGAT
GGCGGCCACTTTGATCGAGCAAGTGCACGGCAGGAGGCCCGTGACCCTGG
TGGGCTTCTCCCACGGCGCTCGCCTCATTTTCTACTGTCTTGAAGAGCTG
AAGAAGAGGAATGCAGTGGGGATTGTGGAGAACGTCTTCCTCTTCGGCGC
TGCTGTCACTGCTGACGCCTCCCGATGGAGAGATATCAGGAGCGTCGTCT
CTGGCAGATTGGTGAACGGCTACACGACCACCGACTGGGTGCTGGGCCTC
CTGCATCGCACTGCCAATTACACGAGGTCGATTGCTGGCCTTGGTCCCGT
GGAATGCGAAGATGTCGAGAACTGGAACCTCACCCACATCGTGAAGGGCC
ATCTCCTCTACAAGCAGAAGATTGGCAAAATCCTCGCCGAGGTGCGCTTC
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