prot_M-pyrifera_M_contig120642.4249.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120642.4249.1
Unique Nameprot_M-pyrifera_M_contig120642.4249.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length168
Homology
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: UPI001C3D80CD (vitamin B12-dependent ribonucleotide reductase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D80CD)

HSP 1 Score: 307 bits (786), Expect = 4.550e-96
Identity = 153/168 (91.07%), Postives = 158/168 (94.05%), Query Frame = 0
Query:    1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 168
            Q SACFILSVNDTMPSIQRWIA+ESEIFRGGSGAGVNLSRLR DGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPD+LEFVRCKA EE KAYALG+MGYDLGLNGDAWRSIQFQNANNS+RLTDDFF RV  GE+WQTR V DGEV DEMPA
Sbjct:  174 QASACFILSVNDTMPSIQRWIASESEIFRGGSGAGVNLSRLRGDGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDILEFVRCKAHEEAKAYALGDMGYDLGLNGDAWRSIQFQNANNSVRLTDDFFRRVAAGENWQTRNVADGEVRDEMPA 341          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: UPI001C3E3FD3 (vitamin B12-dependent ribonucleotide reductase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3E3FD3)

HSP 1 Score: 301 bits (772), Expect = 4.950e-94
Identity = 150/168 (89.29%), Postives = 155/168 (92.26%), Query Frame = 0
Query:    1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 168
            Q SACFILSVNDTMPSIQRWIA+ESEIFRGGSGAGVNLSRLR+DGE LSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPD+LEFVRCKA EE KAYALGEMGYDLGLNGDAWRSIQFQNANNS+RLTDDFF R E G  WQTR+V  GEV  EMPA
Sbjct:  175 QASACFILSVNDTMPSIQRWIASESEIFRGGSGAGVNLSRLRSDGEPLSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDILEFVRCKAHEEAKAYALGEMGYDLGLNGDAWRSIQFQNANNSVRLTDDFFRRAEAGGSWQTRYVASGEVQGEMPA 342          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A7X3UFR8_9BACT (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3UFR8_9BACT)

HSP 1 Score: 219 bits (558), Expect = 2.680e-68
Identity = 110/152 (72.37%), Postives = 127/152 (83.55%), Query Frame = 0
Query:    1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDW 152
            QCSACFILSV+D+M SI  W   E  IF+GGSGAGVNLSR+R+  E LS+GGQASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV+EF+ CKA EE+KAYALG+ G+D+ LNGDAW SIQFQNANNS+R+TDDF   VE+  +W
Sbjct:  176 QCSACFILSVDDSMESILEWCKVEGMIFKGGSGAGVNLSRIRSSKEILSSGGQASGPVSFMRAADSVAGSIKSGGKTRRAAKMVVLDIDHPDVVEFIWCKANEERKAYALGDAGWDMTLNGDAWSSIQFQNANNSVRVTDDFLDAVEKDGEW 327          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: X0TPJ8_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0TPJ8_9ZZZZ)

HSP 1 Score: 215 bits (547), Expect = 2.250e-67
Identity = 107/168 (63.69%), Postives = 133/168 (79.17%), Query Frame = 0
Query:    1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 168
            QCSACFILS+ D+M SI  W  TE +IF+GGSG+G+NLSRLR+  E L+ GG ASGPVSFMR AD+ AG+IKSGG TRRAAKMVIL+ DHPD+ EF++CKA EE+KAYALG+ GYD+ L+GDAW SIQ+QNANNS+R++D+F + V    +W TR+V  GE A    A
Sbjct:   87 QCSACFILSIEDSMDSILDWYRTEGKIFKGGSGSGINLSRLRSSRERLTAGGLASGPVSFMRGADAIAGTIKSGGKTRRAAKMVILNVDHPDIDEFIKCKAGEERKAYALGDCGYDVSLDGDAWVSIQYQNANNSVRVSDEFMSAVVEDREWWTRYVTTGEPAQRYDA 254          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A535D7G9_9CHLR (Ribonucleoside-diphosphate reductase (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535D7G9_9CHLR)

HSP 1 Score: 215 bits (547), Expect = 3.200e-66
Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 0
Query:    3 SACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 168
            SACFILSV D M SI  W   E  IF+GGSG+GVN+SR+R+  E LS GG ASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV EFV CKA EE+KA+ALGEMGYD+ LNG+AWRSIQFQNANNS+R+TDDF  +   G++W      DG   + + A
Sbjct:  154 SACFILSVEDEMGSILDWFKNEGVIFKGGSGSGVNVSRIRSSREQLSGGGYASGPVSFMRGADSVAGSIKSGGTTRRAAKMVVLDADHPDVREFVWCKAKEEKKAWALGEMGYDMSLNGEAWRSIQFQNANNSVRVTDDFMKKAIAGQEWTLTARTDGATLETVNA 319          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A7C1J4J8_9BACT (Vitamin B12-dependent ribonucleotide reductase n=1 Tax=candidate division Zixibacteria bacterium TaxID=2053527 RepID=A0A7C1J4J8_9BACT)

HSP 1 Score: 223 bits (569), Expect = 3.430e-65
Identity = 111/168 (66.07%), Postives = 134/168 (79.76%), Query Frame = 0
Query:    1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 168
            QCSACFILSV DTMPSI  WI TE  IF+GGSG+G+NLS +R+  E L+ GG ASGPVSFMR AD+ AG+IKSGG TRRAAKMV+L+ DHPDVLEF  CKAVEEQKA+ALG  G+D+ +NG+AW+SIQFQNANNSIR+TD+F   VE    W  + V+ G+V + +PA
Sbjct:  149 QCSACFILSVEDTMPSILDWIKTEGMIFKGGSGSGINLSTIRSSREHLAGGGLASGPVSFMRGADATAGAIKSGGKTRRAAKMVVLNVDHPDVLEFANCKAVEEQKAWALGSTGFDMTINGEAWKSIQFQNANNSIRVTDEFMKAVEADGPWNLKEVKSGKVIETVPA 316          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A523YTV9_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A523YTV9_9CHLR)

HSP 1 Score: 215 bits (547), Expect = 4.440e-65
Identity = 106/163 (65.03%), Postives = 131/163 (80.37%), Query Frame = 0
Query:    1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVA 163
            QCSACFILS+ D+M SI  W  TE +IF+GGSG+G+NLS +R+  E L+ GG ASGPVSFMR AD+ AG+IKSGG TRRAAKMVIL+ DHPD+ EF++CKA EE+KAYALG+ GYD+ L+GDAW SIQ+QNANNS+R++DDF   V    +WQTR+V  GE A
Sbjct:  204 QCSACFILSIEDSMDSILEWYRTEGKIFKGGSGSGINLSSVRSSKERLTAGGLASGPVSFMRGADAIAGTIKSGGKTRRAAKMVILNVDHPDIDEFIKCKAGEERKAYALGDAGYDVSLDGDAWVSIQYQNANNSVRVSDDFMRAVVEDPEWQTRYVTTGEPA 366          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A535YFA6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535YFA6_9CHLR)

HSP 1 Score: 215 bits (547), Expect = 7.100e-65
Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 0
Query:    3 SACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 168
            SACFILSV D M SI  W   E  IF+GGSG+GVN+SR+R+  E LS GG ASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV EFV CKA EE+KA+ALGEMGYD+ LNG+AWRSIQFQNANNS+R+TDDF  +   G++W      DG   + + A
Sbjct:  154 SACFILSVEDEMGSILDWFKNEGVIFKGGSGSGVNVSRIRSSREQLSGGGYASGPVSFMRGADSVAGSIKSGGTTRRAAKMVVLDADHPDVREFVWCKAKEEKKAWALGEMGYDMSLNGEAWRSIQFQNANNSVRVTDDFMKKAIAGQEWTLTARTDGATLETVNA 319          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A535GTK4_9CHLR (HintN domain-containing protein n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535GTK4_9CHLR)

HSP 1 Score: 215 bits (547), Expect = 9.570e-65
Identity = 110/166 (66.27%), Postives = 127/166 (76.51%), Query Frame = 0
Query:    3 SACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVADEMPA 168
            SACFILSV D M SI  W   E  IF+GGSG+GVN+SR+R+  E LS GG ASGPVSFMR ADS AGSIKSGG TRRAAKMV+LD DHPDV EFV CKA EE+KA+ALGEMGYD+ LNG+AWRSIQFQNANNS+R+TDDF  +   G++W      DG   + + A
Sbjct:  154 SACFILSVEDEMGSILDWFKNEGVIFKGGSGSGVNVSRIRSSREQLSGGGYASGPVSFMRGADSVAGSIKSGGTTRRAAKMVVLDADHPDVREFVWCKAKEEKKAWALGEMGYDMSLNGEAWRSIQFQNANNSVRVTDDFMKKAIAGQEWTLTARTDGATLETVNA 319          
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Match: A0A7W0LYF6_9ACTN (Vitamin B12-dependent ribonucleotide reductase (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0LYF6_9ACTN)

HSP 1 Score: 210 bits (534), Expect = 4.580e-64
Identity = 107/164 (65.24%), Postives = 125/164 (76.22%), Query Frame = 0
Query:    1 QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSNGGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCKAVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGEDWQTRWVQDGEVAD 164
            QCSACFILSV DTM SI  W   E  IFRGGSGAG+NLS +R   E LS GG ASGPVSFMR ADS AG+IKSGG TRRAAKMV+LD DHPD+L+FV CKA EE+KA AL + G+D+ ++GD + SIQ+QNANNS+R++ +F  R ERGEDWQT    DG   D
Sbjct:  149 QCSACFILSVEDTMESILDWNTREGRIFRGGSGAGINLSNIRGSMEHLSKGGTASGPVSFMRGADSWAGTIKSGGKTRRAAKMVVLDVDHPDILDFVWCKAREEEKAGALRDAGFDMSIDGDGFTSIQYQNANNSVRVSSEFMERAERGEDWQTLARADGSPVD 312          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120642.4249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3D80CD4.550e-9691.07vitamin B12-dependent ribonucleotide reductase n=1... [more]
UPI001C3E3FD34.950e-9489.29vitamin B12-dependent ribonucleotide reductase n=1... [more]
A0A7X3UFR8_9BACT2.680e-6872.37Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
X0TPJ8_9ZZZZ2.250e-6763.69Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A535D7G9_9CHLR3.200e-6666.27Ribonucleoside-diphosphate reductase (Fragment) n=... [more]
A0A7C1J4J8_9BACT3.430e-6566.07Vitamin B12-dependent ribonucleotide reductase n=1... [more]
A0A523YTV9_9CHLR4.440e-6565.03Uncharacterized protein (Fragment) n=1 Tax=Dehaloc... [more]
A0A535YFA6_9CHLR7.100e-6566.27Uncharacterized protein n=1 Tax=Chloroflexi bacter... [more]
A0A535GTK4_9CHLR9.570e-6566.27HintN domain-containing protein n=2 Tax=Chloroflex... [more]
A0A7W0LYF6_9ACTN4.580e-6465.24Vitamin B12-dependent ribonucleotide reductase (Fr... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.70.20coord: 1..168
e-value: 1.0E-40
score: 141.8
NoneNo IPR availablePANTHERPTHR43371FAMILY NOT NAMEDcoord: 1..161
NoneNo IPR availableSUPERFAMILY51998PFL-like glycyl radical enzymescoord: 3..155
IPR000788Ribonucleotide reductase large subunit, C-terminalPFAMPF02867Ribonuc_red_lgCcoord: 3..154
e-value: 2.8E-37
score: 128.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120642contigM-pyrifera_M_contig120642:3..506 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120642.4249.1mRNA_M-pyrifera_M_contig120642.4249.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120642 3..506 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120642.4249.1 ID=prot_M-pyrifera_M_contig120642.4249.1|Name=mRNA_M-pyrifera_M_contig120642.4249.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=168bp
QCSACFILSVNDTMPSIQRWIATESEIFRGGSGAGVNLSRLRADGEALSN
GGQASGPVSFMRWADSGAGSIKSGGGTRRAAKMVILDGDHPDVLEFVRCK
AVEEQKAYALGEMGYDLGLNGDAWRSIQFQNANNSIRLTDDFFARVERGE
DWQTRWVQDGEVADEMPA
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000788RNR_lg_C