mRNA_M-pyrifera_M_contig12057.4238.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: D8LCD1_ECTSI (Ribosomal protein L34 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCD1_ECTSI) HSP 1 Score: 199 bits (506), Expect = 1.540e-63 Identity = 101/119 (84.87%), Postives = 107/119 (89.92%), Query Frame = 3
Query: 3 MVRGDGRITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGD--CGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKKA 353
MVRGDGRITYTRRHAYHT SNKAK VKTPGG LVAHY KKSAKG C D C + LPG+KH+RPK+YKNLKKR+KTVSRAYGGSLCA CVRQRVVRAFLIEEQKIVK+VLLEKQKKKKA
Sbjct: 19 MVRGDGRITYTRRHAYHTKSNKAKAVKTPGGKLVAHYLKKSAKGVHCADASCSVALPGIKHMRPKEYKNLKKRQKTVSRAYGGSLCAPCVRQRVVRAFLIEEQKIVKKVLLEKQKKKKA 137
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: A0A6V2RVW8_HETAK (Hypothetical protein n=2 Tax=Sar TaxID=2698737 RepID=A0A6V2RVW8_HETAK) HSP 1 Score: 176 bits (445), Expect = 1.630e-54 Identity = 85/113 (75.22%), Postives = 94/113 (83.19%), Query Frame = 3
Query: 15 DGRITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKKA 353
D R+ YTRRH Y T SNK K+ KTPGG LVAHY+KK A GP C DCG L G+KHLRPKQYKNLKKREKTVSRAYGGS CA CVRQR+VRAFLIEEQKIVK++++EK KK KA
Sbjct: 4 DIRVQYTRRHCYATKSNKVKITKTPGGRLVAHYHKKKAAGPKCSDCGTVLAGIKHLRPKQYKNLKKREKTVSRAYGGSACAGCVRQRIVRAFLIEEQKIVKKMIMEKMKKAKA 116
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: A0A835ZPJ0_9STRA (Ribosomal protein L34e-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZPJ0_9STRA) HSP 1 Score: 170 bits (430), Expect = 2.950e-52 Identity = 85/112 (75.89%), Postives = 93/112 (83.04%), Query Frame = 3
Query: 12 GDGRITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKK 347
GD R+TYTRRHAY T SNK KVV+TPGG VAHY KK A GP CGDC + LPG+ LRPK+YKNLK+REKTVSRAYGGS CA CVRQRVVRAFLIEEQKIVK++L EK K K
Sbjct: 3 GDKRVTYTRRHAYATASNKIKVVRTPGGKHVAHYRKKKANGPKCGDCKIALPGIACLRPKEYKNLKRREKTVSRAYGGSRCAACVRQRVVRAFLIEEQKIVKKLLAEKIKGK 114
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: A0A7S2UXI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXI2_9STRA) HSP 1 Score: 164 bits (414), Expect = 8.580e-50 Identity = 77/112 (68.75%), Postives = 93/112 (83.04%), Query Frame = 3
Query: 15 DGRITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKK 350
D R+ Y RRH+Y T SNK K+VKTPGG LVAHY+ K AKGP C +CG+ LPG+KH+RP +YKN+KKREKTV+RAYGGS C CV+ R+VRAFLIEEQKIVK+++ EK KKKK
Sbjct: 4 DIRVQYRRRHSYATKSNKIKIVKTPGGRLVAHYHTKKAKGPKCAECGISLPGIKHVRPIKYKNMKKREKTVTRAYGGSECGKCVKDRIVRAFLIEEQKIVKKMVAEKLKKKK 115
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: K3WQZ0_GLOUD (Uncharacterized protein n=4 Tax=Pythiaceae TaxID=4782 RepID=K3WQZ0_GLOUD) HSP 1 Score: 163 bits (412), Expect = 1.620e-49 Identity = 79/111 (71.17%), Postives = 89/111 (80.18%), Query Frame = 3
Query: 21 RITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKKA 353
R+TY RRH+Y T SN K VKTPGGVLVA Y KK GP CGDC L G+KHL PK+YKN+ K ++TVSRAYGGS CA+CVRQR+VRAFLIEEQKIVK+VLLEK KKK A
Sbjct: 6 RVTYRRRHSYATKSNGIKAVKTPGGVLVAQYRKKRCAGPKCGDCKQSLKGIKHLSPKEYKNVSKTQRTVSRAYGGSRCANCVRQRIVRAFLIEEQKIVKKVLLEKMKKKSA 116
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: A0A485KJ51_9STRA (Aste57867_7967 protein n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KJ51_9STRA) HSP 1 Score: 158 bits (400), Expect = 1.230e-47 Identity = 79/110 (71.82%), Postives = 87/110 (79.09%), Query Frame = 3
Query: 21 RITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKK 350
RITY RRH+Y T SN+ VKTPGG LVAHY KK++ GP CGDC L G+KHL K YKN+ K EKTVSRAYGGS CA CVRQR+VRAFLIEEQKIVK+VLLEK KKK
Sbjct: 6 RITYRRRHSYATKSNRIVPVKTPGGKLVAHYRKKTSHGPKCGDCKQSLKGIKHLATKAYKNIAKSEKTVSRAYGGSRCAGCVRQRIVRAFLIEEQKIVKKVLLEKLSKKK 115
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: A0A7S3K4R2_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K4R2_9STRA) HSP 1 Score: 157 bits (398), Expect = 2.260e-47 Identity = 76/112 (67.86%), Postives = 88/112 (78.57%), Query Frame = 3
Query: 15 DGRITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKK 350
DGR+TY+RRH+Y T SN KV+KTPGG LV HY K GP CGDC LPG+K L P QYKN+ KRE+TVSRAYGGS CA CVRQR++RAFLIEEQKIVKQ++LEK + K
Sbjct: 4 DGRVTYSRRHSYATKSNVLKVIKTPGGKLVGHYANKKRNGPKCGDCKNPLPGIKCLSPFQYKNVHKRERTVSRAYGGSRCAKCVRQRIIRAFLIEEQKIVKQMMLEKAQGSK 115
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: F0W7S6_9STRA (Ribosomal protein L34 putative n=2 Tax=Albugo TaxID=65356 RepID=F0W7S6_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.090e-47 Identity = 78/115 (67.83%), Postives = 89/115 (77.39%), Query Frame = 3
Query: 3 MVRGDGRITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKK 347
MVR + R+ + RRH+Y T SNK KVVKTPGG L AHY KK A GP CGDC L G+ HLRPK YK L K ++TVSRAYGGS CA CVR R+VRAFL+EEQKIVK+VLLEK K+K
Sbjct: 1 MVR-ERRVQFRRRHSYATKSNKIKVVKTPGGQLTAHYRKKRAAGPKCGDCKQSLKGIAHLRPKVYKTLSKTQRTVSRAYGGSRCAKCVRNRIVRAFLVEEQKIVKKVLLEKMKRK 114
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: A0A7S2TCS5_PROMC (Hypothetical protein n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TCS5_PROMC) HSP 1 Score: 156 bits (395), Expect = 6.280e-47 Identity = 76/110 (69.09%), Postives = 88/110 (80.00%), Query Frame = 3
Query: 21 RITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKK 350
RITY RRH+Y T SNK + VKTPGG L A Y KK A GP CGDC + LPG+ LRPKQYKNL KREK+VSRAYGG+ CA CVR+R+VRAFLIEEQK+VK++L +K KK K
Sbjct: 6 RITYKRRHSYATKSNKIRAVKTPGGRLTAQYIKKKAAGPKCGDCAVRLPGIPALRPKQYKNLHKREKSVSRAYGGNRCAGCVRERIVRAFLIEEQKVVKRLLAQKAKKSK 115
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Match: M4B9E9_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4B9E9_HYAAE) HSP 1 Score: 157 bits (397), Expect = 1.300e-46 Identity = 78/111 (70.27%), Postives = 88/111 (79.28%), Query Frame = 3
Query: 21 RITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCGMDLPGLKHLRPKQYKNLKKREKTVSRAYGGSLCADCVRQRVVRAFLIEEQKIVKQVLLEKQKKKKA 353
RITY RRH+Y T SN K VKTPGG LVA Y +K A GP CGDC L G+KHL+PK+YKN+ K +TVSRAYGGS CA CVRQR+VRAFLIEEQKIVK+VLLEK KK K+
Sbjct: 51 RITYRRRHSYATKSNAIKPVKTPGGKLVAQYREKRAAGPKCGDCKQSLKGIKHLKPKEYKNVSKTHRTVSRAYGGSRCALCVRQRIVRAFLIEEQKIVKKVLLEKLKKNKS 161 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12057.4238.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12057.4238.1 >prot_M-pyrifera_M_contig12057.4238.1 ID=prot_M-pyrifera_M_contig12057.4238.1|Name=mRNA_M-pyrifera_M_contig12057.4238.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=118bp MVRGDGRITYTRRHAYHTLSNKAKVVKTPGGVLVAHYNKKSAKGPSCGDCback to top mRNA from alignment at M-pyrifera_M_contig12057:4482..6597- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12057.4238.1 ID=mRNA_M-pyrifera_M_contig12057.4238.1|Name=mRNA_M-pyrifera_M_contig12057.4238.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2116bp|location=Sequence derived from alignment at M-pyrifera_M_contig12057:4482..6597- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12057:4482..6597- >mRNA_M-pyrifera_M_contig12057.4238.1 ID=mRNA_M-pyrifera_M_contig12057.4238.1|Name=mRNA_M-pyrifera_M_contig12057.4238.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=708bp|location=Sequence derived from alignment at M-pyrifera_M_contig12057:4482..6597- (Macrocystis pyrifera P11B4 male)back to top |