mRNA_M-pyrifera_M_contig120562.4235.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A7K1ZBE8_9ACTN (Branched-chain amino acid ABC transporter ATP-binding protein/permease n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1ZBE8_9ACTN) HSP 1 Score: 205 bits (522), Expect = 8.490e-60 Identity = 109/188 (57.98%), Postives = 133/188 (70.74%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGRT----------DDERPGSLPETDHVDPGVLSATGLSVDFGGFRALSEAGLTADCGE 534
QM ALL SVAVV+ A LRVY G++ P FFF+YTLLTLVMLIVGGR V+G+L+GV ++TAGRE+ RRLG G+E FG+GLDG + +FRE L +FLGV+MLGFMILRPSGLL DWE D+WL RF R+ + +P LPE + V+P VL A G+ V FGGF+ALS GL A GE
Sbjct: 229 QMVALLISVAVVSVGASLRVYEDGSLLPDNFFFNYTLLTLVMLIVGGRNSVTGALLGVAVMTAGRELARRLGQDGFEIFGIGLDGEPLDWVFRENLQTVFLGVSMLGFMILRPSGLLGDWEFDEWLRSRFRRSRVGRKAQAAETETKPDPLPELESVEPSVLEAQGIDVSFGGFKALSNVGLVARSGE 416
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A2E9W3C2_9ACTN (ABC transporter domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E9W3C2_9ACTN) HSP 1 Score: 200 bits (509), Expect = 5.760e-58 Identity = 104/178 (58.43%), Postives = 129/178 (72.47%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGRTDDERPGSLPETDHVDPGVLSATGLSVDFGGFRALSEAGLTADCGE 534
QM ALL SV VV+ A LRVY G+I P+ FF+ TL+TLVMLIVGGR+ V+G+LVGV +IT GRE+ RRLG G+E FG+GLDG + +FRE L +F+GV+MLGFMI RPSGLLDDWELD+WL+ RFGR + P SLP + D VL A G+ V FGGF+AL + G+ A E
Sbjct: 230 QMVALLISVVVVSVGASLRVYENGSILPRDMFFNLTLVTLVMLIVGGRRSVTGALVGVAVITTGRELARRLGQDGFEVFGIGLDGAPLDWIFRENLKSVFMGVSMLGFMIWRPSGLLDDWELDKWLHSRFGRRSEVPPESLPVIEPDDSSVLVAEGVDVAFGGFQALDDVGIRASRNE 407
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A2D9PTU0_9ACTN (ABC transporter domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A2D9PTU0_9ACTN) HSP 1 Score: 199 bits (506), Expect = 1.740e-57 Identity = 108/180 (60.00%), Postives = 129/180 (71.67%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFG--------RTDDERPGSLPETDHVDPGVLSATGLSVDFGGFRALSEAGL 516
QM ALL SVAVVA A LRVY G+I P+ FFF+ TL+TLVMLIVGGR+ VSG+L+GV +ITAGRE+ RR+G G+EFFG+GLDG + +FRE L +FLGVAMLGFMI RPSGLLDDW+LD+WL+ R G R D RPG P+ + D VL G+SV FGGFRAL L
Sbjct: 228 QMVALLLSVAVVAVGAGLRVYERGSILPRDFFFNLTLVTLVMLIVGGRRSVSGALLGVGVITAGRELARRMGQDGFEFFGVGLDGAPLDWIFRENLKTVFLGVAMLGFMIWRPSGLLDDWDLDRWLHARLGGWRSRRQDRQGDGRPGLPPDVEPEDTDVLIVDGVSVAFGGFRALDNVSL 407
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A7C7S6D0_9ACTN (ATP-binding cassette domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7C7S6D0_9ACTN) HSP 1 Score: 194 bits (492), Expect = 1.690e-55 Identity = 101/174 (58.05%), Postives = 128/174 (73.56%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGRTDDERPGSLPETDHVDPGVLSATGLSVDFGGFRALSEAGLTA 522
QM ALL SVA+V+ A LRVY G+I P FFF+ TL+TLVMLIVGGR+ VSG+L+GV +ITAGRE+ RRLG G+E FG+GLDG + +FRE L +FLGV+MLGFMI RPSGLLDDWELD+WL+ +F R+ + P S + D L A+G+ V FGGF+AL+ G+ A
Sbjct: 229 QMVALLISVAIVSVGASLRVYEKGSILPGDFFFNLTLVTLVMLIVGGRRSVSGALLGVAVITAGRELARRLGQDGFEMFGVGLDGAPLDWIFRENLKTVFLGVSMLGFMIWRPSGLLDDWELDEWLHAKFRRSRESPPASPQVVEPDDSASLVASGVDVAFGGFQALTGVGIEA 402
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A381ZWD0_9ZZZZ (ABC transporter domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381ZWD0_9ZZZZ) HSP 1 Score: 187 bits (475), Expect = 3.530e-54 Identity = 103/180 (57.22%), Postives = 125/180 (69.44%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGRTDDERP-------GSLP-ETDHVDPGVLSATGLSVDFGGFRALSEAGL 516
QM ALL SV+VV A LRVY G+I P+ FFF+ TL+TLVMLIVGGR+ VSG+L+GV +IT GRE+ RRLG G+EFFG+GLDG + +FRE L +FLGVAMLGFMI RP+GLLDDW+LD+WL+ R R R LP E + D VL G+ V FGGF+AL E GL
Sbjct: 205 QMVALLLSVSVVGIGAGLRVYERGSILPRDFFFNLTLVTLVMLIVGGRRSVSGALLGVAVITVGRELARRLGQDGFEFFGIGLDGAPLDWIFRENLKTVFLGVAMLGFMIWRPAGLLDDWDLDRWLHARLDRWRSRRQDLQDGTRSELPSEVEPDDTDVLVVKGVGVSFGGFQALDEVGL 384
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A7K2E2A2_9ACTN (ATP-binding cassette domain-containing protein n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E2A2_9ACTN) HSP 1 Score: 188 bits (478), Expect = 3.030e-53 Identity = 104/176 (59.09%), Postives = 133/176 (75.57%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGRTDDERP----GSLPETDHVDPGVLSATGLSVDFGGFRALSEAGL 516
Q ALL SVAVVA AA LRVY +G++ P+FFFF YTLLTLVML+VGGR GV+G+L+GV +ITA RE RRLG+ GYE FGLGLDG + + +FREGL + LG+AM+ FMI RP+G+LDDWE+D L+RRF R ++P G+ PE D +D LS +G++V+FGGFRAL A +
Sbjct: 251 QTIALLLSVAVVAVAASLRVYEIGSLLPEFFFFQYTLLTLVMLVVGGRNGVTGALLGVGVITAVRESARRLGSDGYEVFGLGLDGPL-DWVFREGLPTVLLGLAMVVFMIWRPNGVLDDWEVDASLWRRFSR---QKPPAAAGAAPEPDALD---LSVSGVTVEFGGFRALDGASI 419
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A2E5ZJC9_9ACTN (ABC transporter domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZJC9_9ACTN) HSP 1 Score: 182 bits (462), Expect = 4.380e-51 Identity = 104/184 (56.52%), Postives = 125/184 (67.93%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGR------TDDERPGS------LPETDHVDPGVLSATGLSVDFGGFRALSEAGL 516
QM ALL SV+VVA A LRVY G+I P+ FFF+ TL+TLVMLIVGGR+ V+G+L+GV +ITAGRE+ RR+G G+E FGLGLD + +FRE L +FLGVAMLGFMI RPSGLLDDWELD+W + R R T E P P+ D VL G++V FGGFRAL AGL
Sbjct: 228 QMVALLISVSVVAIGAGLRVYEKGSILPRDFFFNLTLVTLVMLIVGGRRSVTGALLGVAVITAGRELARRMGQDGFELFGLGLDDAPLDWIFRENLKTVFLGVAMLGFMIWRPSGLLDDWELDRWFHARLQRWRGRGVTAPEVPDVPSPVDVSPDMAAPDEDVLLVDGITVTFGGFRALDGAGL 411
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A6B1H871_9ACTN (ATP-binding cassette domain-containing protein n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6B1H871_9ACTN) HSP 1 Score: 181 bits (460), Expect = 1.120e-50 Identity = 97/178 (54.49%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGRTDDERPGSLPETDHVDPGVLSATGLSVDFGGFRALSEAGLTADCGE 534
QM ALL SVAVV+ A L+VY G++ P+ FFF +TLLTL MLIVGGR V+G+L GV +IT GRE+ RR+G G+E FGLGLD + +FRE L +FLGVAMLGFMI RP G+L DWE D+WLYRRF RT P L + +SV FGGF+ALS++G GE
Sbjct: 242 QMIALLTSVAVVSVGASLKVYEDGSLLPEDFFFFFTLLTLTMLIVGGRNSVTGALFGVAVITVGRELARRMGQDGFEVFGLGLDSEPLDWIFRENLQTVFLGVAMLGFMIWRPKGILSDWEFDEWLYRRFTRTQSAPPVPQATMGADQEARLEVSDVSVVFGGFQALSQSGFEVSSGE 419
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A3M2HFR6_ACTSX (ATP-binding cassette domain-containing protein n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HFR6_ACTSX) HSP 1 Score: 180 bits (456), Expect = 2.880e-50 Identity = 111/178 (62.36%), Postives = 123/178 (69.10%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLY--RRFGRTDDERPGSLPETDHVD--PGVLSATGLSVDFGGFRALSEAGLTA 522
QM ALL SVAVVA A+ LRVY +G ITPKFFFFDYTLLTLVMLIVGGRK V+GSLVGVV+ITAG E TR L + GL + + REGLSDIFLG AMLGFMILRP GLLDDWELD+W RR GR E L + V P L A ++VDFGGFRAL +A L A
Sbjct: 237 QMVALLLSVAVVAVASSLRVYQLGTITPKFFFFDYTLLTLVMLIVGGRKSVTGSLVGVVVITAGNEFTRYLAGPDVDIAGL-------DWILREGLSDIFLGGAMLGFMILRPDGLLDDWELDRWFLARRRRGR---ELVPDLTGLEPVPAAPVRLVADHVTVDFGGFRALDDAHLDA 404
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Match: A0A2D6CPF2_9GAMM (ABC transporter domain-containing protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A2D6CPF2_9GAMM) HSP 1 Score: 177 bits (450), Expect = 1.770e-49 Identity = 101/178 (56.74%), Postives = 123/178 (69.10%), Query Frame = 1
Query: 1 QMAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVSGSLVGVVIITAGREITRRLGTTGYEFFGLGLDGTIGNVLFREGLSDIFLGVAMLGFMILRPSGLLDDWELDQWLYRRFGRTDDERPGSLPETDHVDPGVLSATGLSVDFGGFRALSEAGLTADCGE 534
QM ALL SVAVV+A + LRV+ +G+I P+ FFFDYTLLTL MLIVGGR V+G+LVGVVIITAG E+TR L +G + G+ N L R+GL+DIFLG AMLGFMILRP+GLL +WELD WLY+R R + P P VL A ++V FGG++AL AGL A GE
Sbjct: 231 QMIALLLSVAVVSAGSALRVFELGSINPRLFFFDYTLLTLTMLIVGGRNSVAGTLVGVVIITAGSELTRNL--SGMDVSGM-------NWLLRDGLTDIFLGGAMLGFMILRPAGLLGNWELDHWLYQRLRRAESP-PAPTPIPATASRSVLQAAKVTVHFGGYQALDNAGLEATAGE 398 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120562.4235.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120562.4235.1 >prot_M-pyrifera_M_contig120562.4235.1 ID=prot_M-pyrifera_M_contig120562.4235.1|Name=mRNA_M-pyrifera_M_contig120562.4235.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp MAALLFSVAVVAAAACLRVYSVGNITPKFFFFDYTLLTLVMLIVGGRKGVback to top mRNA from alignment at M-pyrifera_M_contig120562:3..536+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120562.4235.1 ID=mRNA_M-pyrifera_M_contig120562.4235.1|Name=mRNA_M-pyrifera_M_contig120562.4235.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=534bp|location=Sequence derived from alignment at M-pyrifera_M_contig120562:3..536+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120562:3..536+ >mRNA_M-pyrifera_M_contig120562.4235.1 ID=mRNA_M-pyrifera_M_contig120562.4235.1|Name=mRNA_M-pyrifera_M_contig120562.4235.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1062bp|location=Sequence derived from alignment at M-pyrifera_M_contig120562:3..536+ (Macrocystis pyrifera P11B4 male)back to top |