mRNA_M-pyrifera_M_contig120548.4232.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: A0A2E2IXC1_9FLAO (Uncharacterized protein n=1 Tax=Flavobacteriaceae bacterium TaxID=1871037 RepID=A0A2E2IXC1_9FLAO) HSP 1 Score: 122 bits (307), Expect = 7.910e-32 Identity = 61/100 (61.00%), Postives = 74/100 (74.00%), Query Frame = 1
Query: 1 AKSLKVATYGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVE---KLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
AK LK+ YGYKH A +W DIV T+NGPSKF +VE L ++AW +G V NGKPWKVY+SDEV+GA +GKETKYMRVE+T ST+E+HASPI
Sbjct: 223 AKDLKIVKYGYKHYAKAAEAWKDIVKKTENGPSKFHNNMSVEDVDNLIEEAWTNGTAVNNGKPWKVYESDEVIGAVAGKETKYMRVEMTPSTKEVHASPI 322
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: UPI001A904FE8 (hypothetical protein n=2 Tax=Enterococcus TaxID=1350 RepID=UPI001A904FE8) HSP 1 Score: 109 bits (272), Expect = 1.000e-25 Identity = 49/89 (55.06%), Postives = 68/89 (76.40%), Query Frame = 1
Query: 25 YGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
+GYKH P M W DIVSSTKNGP+K+ +G N+E+L ++ W G+ V+NGKPWKV + D+++GASSGKET++MRVE + +T +H PI
Sbjct: 828 HGYKHYPPKNMKWKDIVSSTKNGPAKYKEGINIEQLERKVWKEGKNVSNGKPWKVMEFDDIIGASSGKETRFMRVEKSSNT--IHGHPI 914
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: UPI001FAD26D6 (hypothetical protein n=1 Tax=Clostridium sporogenes TaxID=1509 RepID=UPI001FAD26D6) HSP 1 Score: 98.2 bits (243), Expect = 9.300e-23 Identity = 43/96 (44.79%), Postives = 68/96 (70.83%), Query Frame = 1
Query: 4 KSLKVATYGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
++++ +GYKH P M+W +I+ STK+G +K+ GT+++KL + AW+ G VTNG+ W+V + D+V+GAS+G ETKYMR+E+ T +H PI
Sbjct: 190 EAVEWTNHGYKHFPQKNMNWKEIIKSTKSGAAKYNPGTDIQKLERMAWEKGTSVTNGRTWEVMEFDDVIGASAGAETKYMRIEMRGGT--IHGHPI 283
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: A0A1B9MXE1_9GAMM (Uncharacterized protein n=2 Tax=Gilliamella TaxID=1193503 RepID=A0A1B9MXE1_9GAMM) HSP 1 Score: 93.2 bits (230), Expect = 1.650e-22 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = 1
Query: 25 YGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
+G+KH P SW++IV STKNGP+K++ G +VE L + W G VTNGK WKV + ++++GAS GK T ++RVE +E+T +H PI
Sbjct: 21 HGFKHFPPKNKSWAEIVKSTKNGPAKYISGIDVENLERTIWKEGTPVTNGKNWKVMEFNDIIGASEGKPTNFVRVENSENT--IHGHPI 107
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: UPI00197F7A62 (hypothetical protein n=1 Tax=Pseudomonas frederiksbergensis TaxID=104087 RepID=UPI00197F7A62) HSP 1 Score: 93.6 bits (231), Expect = 2.400e-22 Identity = 40/96 (41.67%), Postives = 71/96 (73.96%), Query Frame = 1
Query: 4 KSLKVATYGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
+S+ +GYKH PS M+W + ++STK+GP+K+++G ++E++ ++A++SG TNGKPWK+ + + V+GAS GK ++++R+EL+ T +H PI
Sbjct: 43 ESVDWTPHGYKHSPSKNMTWKETINSTKSGPAKYMQGISIEQMEREAYESGVPATNGKPWKIKEYETVIGASEGKPSRWIRIELSART--IHGHPI 136
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: UPI001ADC204E (RHS repeat protein n=1 Tax=Cohnella sp. LGH TaxID=1619153 RepID=UPI001ADC204E) HSP 1 Score: 98.6 bits (244), Expect = 6.200e-22 Identity = 47/97 (48.45%), Postives = 67/97 (69.07%), Query Frame = 1
Query: 1 AKSLKVATYGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
A ++ +G+KH ++WS+IV +T++GP+K+L+G NVE L + W++G VTNGK WKV K DEV+GAS G ETKY+RVE + T +H PI
Sbjct: 1631 AVNVNWTNHGFKHFAPKNVNWSEIVKATRDGPAKYLQGMNVEALERNVWENGINVTNGKSWKVMKFDEVIGASGGSETKYVRVEYSGGT--IHGHPI 1725
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: UPI001ED9A1F1 (RHS repeat-associated core domain-containing protein n=1 Tax=Gilliamella apicola TaxID=1196095 RepID=UPI001ED9A1F1) HSP 1 Score: 93.2 bits (230), Expect = 9.460e-22 Identity = 43/89 (48.31%), Postives = 62/89 (69.66%), Query Frame = 1
Query: 25 YGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
+G+KH P SW++IV STKNGP+K++ G +VE L + W G VTNGK WKV + ++++GAS GK T ++RVE +E+T +H PI
Sbjct: 89 HGFKHFPPKNKSWAEIVKSTKNGPAKYISGIDVENLERTIWKEGTPVTNGKNWKVMEFNDIIGASEGKPTNFVRVENSENT--IHGHPI 175
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: A0A2P8HMY3_9BACT (RHS repeat-associated protein n=1 Tax=Chitinophaga niastensis TaxID=536980 RepID=A0A2P8HMY3_9BACT) HSP 1 Score: 97.8 bits (242), Expect = 1.150e-21 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 25 YGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
+GYKH P SW+DIV STK GP+K+ TN+E L + W +G VTNGK WKV D+++GAS GKETKY+RVE + +T +H PI
Sbjct: 1250 HGYKHFPQKDKSWNDIVKSTKTGPAKYTPETNIEALERGVWKTGTPVTNGKDWKVAAFDDIIGASEGKETKYVRVEHSANT--IHGHPI 1336
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: UPI001FE46201 (RHS repeat-associated core domain-containing protein n=1 Tax=Photorhabdus hainanensis TaxID=1004166 RepID=UPI001FE46201) HSP 1 Score: 92.4 bits (228), Expect = 1.220e-21 Identity = 45/97 (46.39%), Postives = 63/97 (64.95%), Query Frame = 1
Query: 1 AKSLKVATYGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
AK +GYKH+P SW+DIV STK+GP+K+ N+E L + + +GQ VTNGKPWKV E++GAS GK ++++RVE + T +H PI
Sbjct: 65 AKEPNWTNHGYKHVPPKNASWNDIVKSTKSGPAKYKPEINIEALERSVYKTGQPVTNGKPWKVQDMGEIIGASEGKPSQWIRVEYSGGT--IHGHPI 159
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Match: A0A6I3WKF0_9PSED (Type IV secretion protein Rhs (Fragment) n=1 Tax=Pseudomonas spelaei TaxID=1055469 RepID=A0A6I3WKF0_9PSED) HSP 1 Score: 94.4 bits (233), Expect = 1.560e-21 Identity = 44/95 (46.32%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 7 SLKVATYGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDSGQEVTNGKPWKVYKSDEVLGASSGKETKYMRVELTESTEELHASPI 291
++K +GYKH PS KM W++I+ +TK+GP+K+ G ++EKL + A+ +G VTNGKPWKV + E +GAS GK ++++R+EL+ T +H PI
Sbjct: 158 NVKWTAHGYKHNPSKKMPWNEIIITTKSGPAKYKPGLDIEKLERDAYKNGAVVTNGKPWKVMEYPESIGASEGKSSRWIRIELSAKT--IHGHPI 250 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120548.4232.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120548.4232.1 >prot_M-pyrifera_M_contig120548.4232.1 ID=prot_M-pyrifera_M_contig120548.4232.1|Name=mRNA_M-pyrifera_M_contig120548.4232.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=97bp AKSLKVATYGYKHIPSAKMSWSDIVSSTKNGPSKFLKGTNVEKLTKQAWDback to top mRNA from alignment at M-pyrifera_M_contig120548:248..538+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120548.4232.1 ID=mRNA_M-pyrifera_M_contig120548.4232.1|Name=mRNA_M-pyrifera_M_contig120548.4232.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=291bp|location=Sequence derived from alignment at M-pyrifera_M_contig120548:248..538+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120548:248..538+ >mRNA_M-pyrifera_M_contig120548.4232.1 ID=mRNA_M-pyrifera_M_contig120548.4232.1|Name=mRNA_M-pyrifera_M_contig120548.4232.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=582bp|location=Sequence derived from alignment at M-pyrifera_M_contig120548:248..538+ (Macrocystis pyrifera P11B4 male)back to top |