prot_M-pyrifera_M_contig120373.4198.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120373.4198.1
Unique Nameprot_M-pyrifera_M_contig120373.4198.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length82
Homology
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BLAST of mRNA_M-pyrifera_M_contig120373.4198.1 vs. uniprot
Match: A0A0D2WWW8_CAPO3 (E3 ubiquitin protein ligase n=1 Tax=Capsaspora owczarzaki (strain ATCC 30864) TaxID=595528 RepID=A0A0D2WWW8_CAPO3)

HSP 1 Score: 57.8 bits (138), Expect = 6.510e-8
Identity = 32/69 (46.38%), Postives = 49/69 (71.01%), Query Frame = 0 
Query:    8 LIAEIDSIGEELRKMQEQNARLAKQMAEKDDANAQLMSERIQGKMQEGLLKKEAQLEQQRAAVLDEKVQ 76
            LIAE+DSIG+  + MQEQN+RL +Q+ EKDDAN QLMSER++    + +L+ E  + + + A +  +V+
Sbjct:   77 LIAEMDSIGQSFQDMQEQNSRLLQQLNEKDDANFQLMSERLKASQLQQMLRDEKDIIEGKMAAMQAQVE 145
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120373.4198.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A0D2WWW8_CAPO36.510e-846.38E3 ubiquitin protein ligase n=1 Tax=Capsaspora owc... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 61..81
NoneNo IPR availableCOILSCoilCoilcoord: 5..46
IPR013956E3 ubiquitin ligase Bre1PANTHERPTHR23163RING FINGER PROTEIN-RELATEDcoord: 3..79

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120373contigM-pyrifera_M_contig120373:123..368 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120373.4198.1mRNA_M-pyrifera_M_contig120373.4198.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120373 123..368 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120373.4198.1 ID=prot_M-pyrifera_M_contig120373.4198.1|Name=mRNA_M-pyrifera_M_contig120373.4198.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=82bp
GAEAEEELIAEIDSIGEELRKMQEQNARLAKQMAEKDDANAQLMSERIQG
KMQEGLLKKEAQLEQQRAAVLDEKVQQLERLA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013956E3_ubiquit_lig_Bre1