mRNA_M-pyrifera_M_contig120368.4196.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: A0A7S4IM87_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IM87_9EUKA) HSP 1 Score: 123 bits (308), Expect = 2.310e-30 Identity = 59/111 (53.15%), Postives = 80/111 (72.07%), Query Frame = 1
Query: 4 DFIRKRLSHALCGGFGSITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDERKNVYDAIYHKEALLMSFPPSDQRLLQDITHADRHLLAEGPL 336
+F+ K+LS+ LC GFGS+TSFLITP+QRLPRYLL+L++L TP HPDR V+++YELL +T +ID++K YD IYH +AL F D+ + +I R L+AEGPL
Sbjct: 292 EFVNKQLSNDLCLGFGSLTSFLITPIQRLPRYLLYLKDLHSCTPEGHPDRNDVEQAYELLSKMTVQIDQQKLKYDEIYHLQALHQRFVFHDRCRVPEILDPSRKLIAEGPL 402
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: A0A6B2KZN1_9EUKA (DH domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2KZN1_9EUKA) HSP 1 Score: 65.9 bits (159), Expect = 3.160e-10 Identity = 33/94 (35.11%), Postives = 54/94 (57.45%), Query Frame = 1
Query: 7 FIRKRLSHALCGGFGSITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDERKNVYDAIYHKEALLMSFPPSDQRLL 288
++ K + C G S+ SFLI PVQR+PRY L LREL+ TPA HPD ++ + + ++ V ++++K + + L+ +F SD +L
Sbjct: 431 WLEKTCAQDFCSGL-SLLSFLIMPVQRMPRYSLLLRELNSSTPAGHPDEGNIKEAIQKIEYVNSYLNDKKRETEGQFKMIELISNFVESDAPIL 523
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: A0A1J4KF27_9EUKA (DH domain-containing protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4KF27_9EUKA) HSP 1 Score: 65.5 bits (158), Expect = 4.550e-10 Identity = 27/53 (50.94%), Postives = 42/53 (79.25%), Query Frame = 1
Query: 52 SITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDE 210
++ S+LITP+QR+PRY+LFLREL + TP +HPD ++ S E ++++T K+DE
Sbjct: 303 NLASYLITPIQRMPRYMLFLRELIKTTPNSHPDHHYLHCSLEKIQAITSKLDE 355
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: A0A7S4HVT8_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HVT8_9EUKA) HSP 1 Score: 61.6 bits (148), Expect = 8.020e-10 Identity = 31/68 (45.59%), Postives = 47/68 (69.12%), Query Frame = 1
Query: 10 IRKRLSHAL--CGGFGSITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKID 207
++K +S L F SI SFLITPVQRLPRYLL L +L + TP H D+E+++++ E ++ +T +I+
Sbjct: 59 VQKFMSEMLQRTQNFPSIQSFLITPVQRLPRYLLMLNDLKKHTPDDHSDKENLNKAVEQIQRITNQIN 126
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: L8HJB2_ACACA (Calponin domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJB2_ACACA) HSP 1 Score: 64.3 bits (155), Expect = 1.130e-9 Identity = 32/94 (34.04%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 55 ITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDERKNVYDAIYHKEALLMSFPPSDQRLLQDITHADRHLLAEGPL 336
+ SFLI PVQR+PRY+L L+EL++ TP HPD ++ +S E+L ++ I+ K D+ + + S + + + H R + EG L
Sbjct: 703 LNSFLILPVQRVPRYMLLLQELEKQTPEEHPDSPNIKKSIEILGNILDDINASKTKSDSQHKLSTIESSIAGLEALPIDTLVHPKRRYVREGVL 796
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: L8HIU1_ACACA (RhoGEF domain containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HIU1_ACACA) HSP 1 Score: 63.9 bits (154), Expect = 1.440e-9 Identity = 39/109 (35.78%), Postives = 59/109 (54.13%), Query Frame = 1
Query: 4 DFIRKRLSHALCGGFGSITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDERKNVYDAIYHKEALLMSFPPSDQRLLQDITHADRHLLAEG 330
F+ H+ C G + +FLITP+QRLPRY+L L+EL +LTP+ H D +++ R+ +K +T I+ K V + +Y K + D LL R L+ EG
Sbjct: 138 QFLADANRHSDCRG-RDLPTFLITPIQRLPRYILLLQELQKLTPSKHKDYKNIGRALSDIKQMTDYINREKQVAE-MYQKLLQIQEAFVDDISLLSK----QRQLVQEG 240
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: A0A1J4L428_9EUKA (DH domain-containing protein n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4L428_9EUKA) HSP 1 Score: 63.9 bits (154), Expect = 1.560e-9 Identity = 30/52 (57.69%), Postives = 41/52 (78.85%), Query Frame = 1
Query: 55 ITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDE 210
ITS+LITPVQR+PRY+LFLREL + TPA+HPD ++ + L+ +T +IDE
Sbjct: 310 ITSYLITPVQRMPRYILFLRELIKATPASHPDSALLNAASVKLEEITHQIDE 361
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: B0EPZ4_ENTDS (Spermatogenesis-associated protein, putative n=8 Tax=Entamoeba TaxID=5758 RepID=B0EPZ4_ENTDS) HSP 1 Score: 63.2 bits (152), Expect = 2.750e-9 Identity = 35/95 (36.84%), Postives = 58/95 (61.05%), Query Frame = 1
Query: 55 ITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKID---ERKNVYDAIYHKEALLMSFPPSDQRLLQDITHADRHLLAEG 330
I++FLITPVQRLPRY L L +L + TPA HPD E+V ++ +L+ VT ++ +++ +++ + + + + P + I + R LLAEG
Sbjct: 297 ISAFLITPVQRLPRYKLLLADLLKYTPACHPDHENVKQALKLITEVTITVNNNTKKREMFEKMKEYQMSITNLPEDFK-----INNGSRELLAEG 386
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: UPI0002C3D75B (spermatogenesis-associated protein, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=UPI0002C3D75B) HSP 1 Score: 63.2 bits (152), Expect = 2.770e-9 Identity = 31/75 (41.33%), Postives = 49/75 (65.33%), Query Frame = 1
Query: 52 SITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDE---RKNVYDAIYHKEALLMSFP 267
S+TSFLITP+QRLPRY LFL +L + TPA HPD + V ++ ++ VT ++++ +K + D + + L+ P
Sbjct: 314 SLTSFLITPIQRLPRYKLFLIDLVKCTPACHPDHDDVKKALSVISVVTSQVNDGKKQKEMLDKMKELQKRLVGVP 388
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Match: A0A0A1U871_ENTIV (Rho/RAC guanine nucleotide exchange factor, putative n=1 Tax=Entamoeba invadens IP1 TaxID=370355 RepID=A0A0A1U871_ENTIV) HSP 1 Score: 62.0 bits (149), Expect = 7.180e-9 Identity = 34/76 (44.74%), Postives = 48/76 (63.16%), Query Frame = 1
Query: 4 DFIRKRLSHALCGGFGSITSFLITPVQRLPRYLLFLRELDELTPATHPDREHVDRSYELLKSVTGKIDERKNVYDA 231
D++++ L A G ++S+LI PVQRLPRY+L L EL + T HPD + +D L+K VT +I+E KN DA
Sbjct: 325 DYVKQGLDEAK-GNDKDMSSYLIMPVQRLPRYVLLLNELKKHTWEGHPDGKTLDEMMVLVKRVTTEINESKNKADA 399 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120368.4196.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120368.4196.1 >prot_M-pyrifera_M_contig120368.4196.1 ID=prot_M-pyrifera_M_contig120368.4196.1|Name=mRNA_M-pyrifera_M_contig120368.4196.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp GDFIRKRLSHALCGGFGSITSFLITPVQRLPRYLLFLRELDELTPATHPDback to top mRNA from alignment at M-pyrifera_M_contig120368:3..338+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120368.4196.1 ID=mRNA_M-pyrifera_M_contig120368.4196.1|Name=mRNA_M-pyrifera_M_contig120368.4196.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=336bp|location=Sequence derived from alignment at M-pyrifera_M_contig120368:3..338+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120368:3..338+ >mRNA_M-pyrifera_M_contig120368.4196.1 ID=mRNA_M-pyrifera_M_contig120368.4196.1|Name=mRNA_M-pyrifera_M_contig120368.4196.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=672bp|location=Sequence derived from alignment at M-pyrifera_M_contig120368:3..338+ (Macrocystis pyrifera P11B4 male)back to top |