mRNA_M-pyrifera_M_contig12035.4191.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12035.4191.1 vs. uniprot
Match: D7G3Q1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3Q1_ECTSI) HSP 1 Score: 82.8 bits (203), Expect = 1.460e-12 Identity = 92/270 (34.07%), Postives = 112/270 (41.48%), Query Frame = 1
Query: 1342 GSAVDIS-LGRGVVPGSPGSRHRGRDPTTTAAVAVGWARGKL--RSASSKSRSASPN------GRWTPSPATWGGIPI-SPCLWG---------------------DTG-GRGRRGGXXXXXXXXXXXXXXXEEC---------FEGSEFFRTADGRSLFAEPLGATGGEGD-YCSNAHWGRAEGGRGEDPVLLVPSSSAGXXXXXXXRDSPGKERGG--GQGLGLEARLRRRAIDSRGRDDKRRAEMAATKRRVKHLADEVTRRLGERL 2019
GS VD+S GR P R + R TTA GW R + R + RS +P G W P P WGG PI SP WG DTG R RG EE F+ +EFFRTA+GRSLFAE L TGG+ + C WG E G +D G ERG G+ LG+ AR RR ID+R RD KRRAEM + ++K L +E R ++L
Sbjct: 440 GSRVDLSSAGR---RRHPVGREKPRSNPTTADKNNGWVRSRSFSRGGGRRGRSGTPTTPRTAVGCWAPPPTRWGGTPIRSPLFWGGGGEGSTAAHMGGGKEGDGCADTGYDRRSRGFPLDFHNGGELERGGKEEGMNAGGRGFEFKDAEFFRTANGRSLFAESLSGTGGKAERVCHAIQWG--EDGDSDDQGR---HRRRGFLCLLGEEGRRASERGSPDGRRLGVAARRRRARIDARSRDGKRRAEMMFAREKIKRLEEECISRRTDKL 701
BLAST of mRNA_M-pyrifera_M_contig12035.4191.1 vs. uniprot
Match: A0A6H5KEU3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEU3_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 2.820e-8 Identity = 87/262 (33.21%), Postives = 105/262 (40.08%), Query Frame = 1
Query: 1339 GGSAVDIS-LGRGVVPGSPGSRHRGRDPTTTAAVAVGWARGKL--RSASSKSRSASPN------GRWTPSPATWGGIPI-SPCLWG--------------------DTG-GRGRRGGXXXXXXXXXXXXXXXEECFEG---------SEFFRTADGRSLFAEPLGATGGEGD-YCSNAHWGRAEGGRGEDPVLLVPSSSAGXXXXXXXRDSPGKERGG--GQGLGLEARLRRRAIDSRGRDDKRRAEMAATKRRVKHLADEV 1995
GGS VD S GR P R + R TTA GW R + R + + RS + G W P P WGG PI SP G DTG R RG EE + +EFFRT DG+SLFAE L TGG+ + C WG E G +D G ERG G+ LG+ AR RR ID++ RD KRRAEM + +K L +EV
Sbjct: 427 GGSRVDFSSAGR---HRHPVGREKPRSNPTTANKNNGWVRSRSFSRGGARRGRSGTQTTPHTAAGCWVPPPTRWGGTPIKSPLFLGGGEGSTAAHMGGGKEGDGCVDTGHDRRSRGLPLDFHNGGELEWVGGEEGMDAEGRGFEIIDAEFFRTVDGQSLFAESLSGTGGKTERVCHAIQWG--EDGDRDDQGH---HRRRGFFCLLGEEGHLASERGSPDGRRLGVAARRRRARIDTKSRDGKRRAEMMFARETIKRLEEEV 680 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12035.4191.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12035.4191.1 >prot_M-pyrifera_M_contig12035.4191.1 ID=prot_M-pyrifera_M_contig12035.4191.1|Name=mRNA_M-pyrifera_M_contig12035.4191.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=677bp MVNVSGEAIKRLRCLEGLDESPFLMRKSLPATQGSFSASRKALSSGTPPFback to top mRNA from alignment at M-pyrifera_M_contig12035:1688..8954+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12035.4191.1 ID=mRNA_M-pyrifera_M_contig12035.4191.1|Name=mRNA_M-pyrifera_M_contig12035.4191.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=7267bp|location=Sequence derived from alignment at M-pyrifera_M_contig12035:1688..8954+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12035:1688..8954+ >mRNA_M-pyrifera_M_contig12035.4191.1 ID=mRNA_M-pyrifera_M_contig12035.4191.1|Name=mRNA_M-pyrifera_M_contig12035.4191.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=4062bp|location=Sequence derived from alignment at M-pyrifera_M_contig12035:1688..8954+ (Macrocystis pyrifera P11B4 male)back to top |