mRNA_M-pyrifera_M_contig120253.4184.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A7X6AQ66_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6AQ66_9ACTN) HSP 1 Score: 257 bits (656), Expect = 5.670e-84 Identity = 134/166 (80.72%), Postives = 149/166 (89.76%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEP 498
AEWRDRAEAAL G++ +D+KDIRSVVVAADSAARD+E+RALAEQLRDGLT RV+ EHRKWLDELAENI EGRTVRALR SSRPPKAGAPLPPDMAERLA ASASLT+++TQDRWATVLDAVAFSPV++QV PE P +P++QLL AVRK AGKVP IA FGVEP
Sbjct: 59 AEWRDRAEAALAGIDAVDVKDIRSVVVAADSAARDEESRALAEQLRDGLTRRVETEHRKWLDELAENIAEGRTVRALRLSSRPPKAGAPLPPDMAERLATTASASLTSDVTQDRWATVLDAVAFSPVRAQVSPESLPEAPSEQLLGAVRKVAGKVPQIAAAFGVEP 224
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A2D8LR38_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LR38_9ACTN) HSP 1 Score: 227 bits (578), Expect = 4.150e-71 Identity = 123/177 (69.49%), Postives = 145/177 (81.92%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEP--QAGRKKAAR 525
AEWRDRAEAA+ G+ +D++DIRSVVVAAD AARD+ETRALA+QLR+GLT RVDAEH W DELA+ I EGRTVRALR SSRPPKAGAPLP DMAERLAAAAS SLT+E+T DR+ATV+DAVAFSPV++QV +G P +P+D+L AV K AG++P IA LFG+ Q R KA R
Sbjct: 123 AEWRDRAEAAVAGIETVDLRDIRSVVVAADGAARDEETRALADQLREGLTNRVDAEHNAWRDELAQTIAEGRTVRALRLSSRPPKAGAPLPIDMAERLAAAASESLTSEVTSDRYATVIDAVAFSPVRTQVKAQGVPTNPSDELTKAVTKLAGRIPQIAALFGIXAPAQKPRGKAKR 299
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A3C0HPF4_9ACTN (Uncharacterized protein (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HPF4_9ACTN) HSP 1 Score: 228 bits (580), Expect = 8.170e-70 Identity = 123/177 (69.49%), Postives = 145/177 (81.92%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEP--QAGRKKAAR 525
AEWRDRAEAA+ G+ +D++DIRSVVVAAD AARD+ETRALA+QLR+GLT RVDAEH W DELA+ I EGRTVRALR SSRPPKAGAPLP DMAERLA AAS SLT+E+T DR+ATV+DAVAFSPV++QV +G P +P+D+L AV K AG++P IA LFG+E Q R KA R
Sbjct: 262 AEWRDRAEAAVAGIETVDLRDIRSVVVAADGAARDEETRALADQLREGLTNRVDAEHNAWRDELAQTIAEGRTVRALRLSSRPPKAGAPLPIDMAERLATAASESLTSEVTSDRYATVIDAVAFSPVRTQVKAQGVPTNPSDELAKAVTKLAGRIPQIAALFGIEAPAQKPRGKAKR 438
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A6B1AVJ5_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AVJ5_9ACTN) HSP 1 Score: 228 bits (580), Expect = 3.910e-69 Identity = 117/176 (66.48%), Postives = 146/176 (82.95%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEPQAGRKKAARR 528
AEWRDRAEAA++G+ +D++DIRSVVVAADS ARD+++R LAE+LR+GL+ RV++EHR WL+E+A+++ +GR VRALR SSRPPKAG+PLP DMAERL AAS SL++++ Q RWATVLDAVAFSPV+SQV P G P +PNDQLLA VRK A KVP IA LFGV A +K+ A R
Sbjct: 279 AEWRDRAEAAISGIETVDLRDIRSVVVAADSGARDEQSRELAEKLREGLSTRVESEHRSWLNEIAQHLADGRIVRALRLSSRPPKAGSPLPIDMAERLTEAASESLSSDVAQQRWATVLDAVAFSPVRSQVKPHGLPENPNDQLLATVRKLAAKVPEIAALFGVTTSAPKKRGANR 454
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A355DGQ9_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A355DGQ9_9ACTN) HSP 1 Score: 215 bits (548), Expect = 1.020e-67 Identity = 113/171 (66.08%), Postives = 138/171 (80.70%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEPQAGRK 513
AEW DRAEAAL G+ ++D++D+RSVVVAA++AAR DETRALAE++R+GLT RVD EH +WL E+ +++GR VRALR SSRPPKAGAPLP + E+LAAAASASLT+EI+QDRWATVLDAVA SPV +VVPEG P P D LL VR+ + VP IA FGVEP+A R+
Sbjct: 66 AEWHDRAEAALAGIGDVDLRDLRSVVVAAETAARTDETRALAEKIREGLTTRVDREHGQWLHEVTSTLKDGRIVRALRLSSRPPKAGAPLPTPVLEQLAAAASASLTSEISQDRWATVLDAVALSPVHQRVVPEGLPTEPGDALLEVVRRVSMNVPDIAAAFGVEPKAPRR 236
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A6L7XFN2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6L7XFN2_9ACTN) HSP 1 Score: 209 bits (532), Expect = 9.780e-65 Identity = 108/175 (61.71%), Postives = 134/175 (76.57%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEPQAGRKKAAR 525
AEW DRA+AAL G+ +ID++DIRSV+ AAD AAR DETR LAE LR GL R++ +HR+WLDELA I EGRT+RALR SSRPPKAG PLPPDMAERLA A+A L+ Q RW+TV+D+V+ SPV++QV+P G P P++ LL VR+ A +VP IATLFG+EPQA + R
Sbjct: 61 AEWHDRADAALAGIAKIDLRDIRSVIAAADRAARTDETRTLAESLRAGLAQRLEVDHRRWLDELAGTIGEGRTIRALRLSSRPPKAGTPLPPDMAERLANLAAADLSPTTNQQRWSTVVDSVSLSPVRTQVIPLGAPEKPSEDLLTTVRRLADRVPQIATLFGIEPQAPSPRGRR 235
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A5Q2RIA9_9ACTN (Uncharacterized protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RIA9_9ACTN) HSP 1 Score: 212 bits (539), Expect = 2.020e-63 Identity = 108/168 (64.29%), Postives = 135/168 (80.36%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEPQA 504
AEWRDRA+AAL + E+D++D+RSVVVAAD+ ARDDE R +A+QLR+GL RV+AEH WL E++E +++GR VRALR SSRPPKAGAPLP ++A LA AA +L +E+TQ+RWATVLDAVA+SPV+ QVVP PA P D L+AAVRK A + P IATLFGV+P A
Sbjct: 229 AEWRDRADAALGSLEELDLRDLRSVVVAADTGARDDEARQVADQLREGLNRRVEAEHAAWLAEMSETLRDGRVVRALRLSSRPPKAGAPLPAELATSLATAAGEALGSEVTQERWATVLDAVAYSPVRQQVVPAAVPAEPGDALMAAVRKLASRTPQIATLFGVQPTA 396
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A6I3BZ93_9ACTN (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A6I3BZ93_9ACTN) HSP 1 Score: 212 bits (540), Expect = 5.200e-63 Identity = 113/178 (63.48%), Postives = 141/178 (79.21%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEPQAGRKKAARRTP 534
AEWRD+A+AAL G++EID++D+R+VVVAAD+A RDDETR +A++LRDGL ARVD EH KWL EL E + +GRTVRALR SSRPPKAGAPLP ++ ERLAA+A+A LT EITQDRWAT++DAVAFSPV+ V P G PA+ D+L A + + +VP IA +FGV P+A A RR P
Sbjct: 279 AEWRDKADAALAGIDEIDLRDLRTVVVAADAAGRDDETREVAQKLRDGLGARVDGEHAKWLAELTELVGDGRTVRALRLSSRPPKAGAPLPTELTERLAASATAGLTAEITQDRWATLVDAVAFSPVRLVVNPLGVPATVGDELKATIERIGSRVPQIAEMFGVSPEAA---APRRGP 453
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A6B1ECK1_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1ECK1_9ACTN) HSP 1 Score: 210 bits (534), Expect = 8.340e-63 Identity = 110/166 (66.27%), Postives = 131/166 (78.92%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEP 498
AEW DRA+AAL G+ +ID++DIRSV+ AAD AARDDETRALAE LR GL R++ +HRKWLDELA I EGRTVRALR SSRP K G+PLPPDMAERLA A+A L Q RWATV+D+VA SPV++QVVPEG P P+D L+A +R+ A +VP IA LFG+EP
Sbjct: 288 AEWHDRADAALAGIAKIDLRDIRSVIAAADRAARDDETRALAESLRAGLIQRLEVDHRKWLDELAGTIGEGRTVRALRISSRPVKPGSPLPPDMAERLANMAAADLNPTANQQRWATVVDSVAVSPVRTQVVPEGIPERPSDDLMATIRRLADRVPQIAALFGIEP 453
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Match: A0A6G0ABM2_9ACTN (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0ABM2_9ACTN) HSP 1 Score: 207 bits (528), Expect = 2.880e-62 Identity = 110/177 (62.15%), Postives = 138/177 (77.97%), Query Frame = 1
Query: 1 AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTARVDAEHRKWLDELAENIQEGRTVRALRHSSRPPKAGAPLPPDMAERLAAAASASLTNEITQDRWATVLDAVAFSPVKSQVVPEGTPASPNDQLLAAVRKHAGKVPHIATLFGVEPQA--GRKKAAR 525
AEWRDRAEAA + E+D++D+RSVVVAAD+AARD+E R LA +LR+ L RV+ EH KWL EL+E + +GR VRALR SSRPPKAGAPLP D+ +RLAAAAS LT+E TQDRWATVLDAVA+SPV+SQVVP P PN++LL + + A ++PHIA FG+EP + G+ + AR
Sbjct: 210 AEWRDRAEAAKADIEELDLRDLRSVVVAADTAARDEECRRLAVELREALQRRVEEEHAKWLAELSETLADGRLVRALRLSSRPPKAGAPLPADLGKRLAAAASDGLTSETTQDRWATVLDAVAYSPVRSQVVPVSWPVEPNEELLREIARLASRLPHIAGKFGIEPSSSPGQARGAR 386 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120253.4184.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120253.4184.1 >prot_M-pyrifera_M_contig120253.4184.1 ID=prot_M-pyrifera_M_contig120253.4184.1|Name=mRNA_M-pyrifera_M_contig120253.4184.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp AEWRDRAEAALTGMNEIDIKDIRSVVVAADSAARDDETRALAEQLRDGLTback to top mRNA from alignment at M-pyrifera_M_contig120253:3..539- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120253.4184.1 ID=mRNA_M-pyrifera_M_contig120253.4184.1|Name=mRNA_M-pyrifera_M_contig120253.4184.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig120253:3..539- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120253:3..539- >mRNA_M-pyrifera_M_contig120253.4184.1 ID=mRNA_M-pyrifera_M_contig120253.4184.1|Name=mRNA_M-pyrifera_M_contig120253.4184.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig120253:3..539- (Macrocystis pyrifera P11B4 male)back to top |