mRNA_M-pyrifera_M_contig120237.4180.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig120237.4180.1
Unique NamemRNA_M-pyrifera_M_contig120237.4180.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: A0A2T9Y9Y8_9FUNG (acidPPc domain-containing protein n=2 Tax=Harpellales TaxID=61421 RepID=A0A2T9Y9Y8_9FUNG)

HSP 1 Score: 92.4 bits (228), Expect = 1.110e-19
Identity = 58/153 (37.91%), Postives = 88/153 (57.52%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSS--------SNPIPTYYTQSICTGNEEDIA-DGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFVSSHV 432
            ++ KN+ GR RPDF+ARC  D SKI  +S  S        S+P  +++T +ICT  ++++  DG RSFPSGH+S S  G FF  F L+   A SL     + +K    V+ L++A++    A +R +D  H+  D+  G LLG+ VA+   +V
Sbjct:  105 NIIKNMVGRHRPDFIARCKPDLSKINMASAFSIPSNTTILSDPTLSFFTNTICTNQDKNVLHDGMRSFPSGHSSASFCGLFF--FSLYLAGALSLYDRKGYAAKAIIFVIPLLVASVI---AVSRTSDYRHHWQDVTVGGLLGMVVAYFVYYV 252          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: A0A2H3J264_WOLCO (Acid phosphatase/Vanadium-dependent haloperoxidase n=1 Tax=Wolfiporia cocos (strain MD-104) TaxID=742152 RepID=A0A2H3J264_WOLCO)

HSP 1 Score: 90.5 bits (223), Expect = 3.070e-19
Identity = 58/166 (34.94%), Postives = 78/166 (46.99%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQSICTGNEEDIADGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAW------------TSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFVSSHVLLSTPIARAT 462
            +V KN  GRLRPDFL+RC  D+                  T   CTG+  DI DGRRSFPSGH+S + +G  F+   L           GAW            +SKL R +  ++  A A   A +RV DN H+  D+I G L+G+  A +   +   +P A  T
Sbjct:   73 EVLKNRVGRLRPDFLSRCEWDK------------------TLKSCTGDVVDILDGRRSFPSGHSSTAFSGMMFLSLWLAGMT-------GAWCITRSAPARSLLSSKLARLIFSILPLAFATWVAISRVEDNRHHKEDVIVGGLIGVISATICYFIYWPSPFAPQT 213          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: UPI00167F926E (phospholipid phosphatase 1 isoform X3 n=2 Tax=Neotominae TaxID=337963 RepID=UPI00167F926E)

HSP 1 Score: 85.5 bits (210), Expect = 1.320e-17
Identity = 54/140 (38.57%), Postives = 74/140 (52.86%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQSICTGNEEDIADGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFV 420
            D+ K   GRLRP FLA C++D S+I    N S   I  Y    +C GNE+ + +GR SF SGH+SFS     F    L           G W ++L RP LQ  L AL++    +RV+D  H+ SD++ G + G  VA +
Sbjct:   54 DIAKYSIGRLRPHFLAVCDLDWSQI----NCSDGYIENY----VCRGNEDKVREGRLSFYSGHSSFSMYCMLFTALYLQARMK------GDW-ARLLRPTLQFGLVALSIYVGLSRVSDYKHHWSDVMVGLIQGAVVAIL 178          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: A0A7L4JH21_9PASS (PLPP2 phosphatase (Fragment) n=1 Tax=Pomatorhinus ruficollis TaxID=932028 RepID=A0A7L4JH21_9PASS)

HSP 1 Score: 84.3 bits (207), Expect = 1.380e-17
Identity = 55/145 (37.93%), Postives = 79/145 (54.48%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQ--SICTGNEEDIADGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFVSSH 429
            D+ K + GRLRP+FLA CN D SK+  S           Y Q  ++C G   +I + R SF SGH+SF   G + ++F L  +  + LV  G W ++L RP +Q  L A A+    TRV+D  H+ SD++ G L G  +A +  H
Sbjct:    8 DLAKYMIGRLRPNFLAVCNPDWSKVNCS----------IYVQLENVCQGESRNITESRLSFYSGHSSF---GMYCMMF-LALYVQARLV--GKW-ARLLRPTIQFFLIAFAIYVGYTRVSDYKHHWSDVLVGLLQGALIAVLVVH 135          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: A0A384BG13_BALAS (phospholipid phosphatase 2 n=2 Tax=Artiodactyla TaxID=91561 RepID=A0A384BG13_BALAS)

HSP 1 Score: 85.5 bits (210), Expect = 1.980e-17
Identity = 52/139 (37.41%), Postives = 73/139 (52.52%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQSICTGNEEDIADGRRSFPSGHASFSA-AGCFFVIFVLHRFAASSLVPCGAWTSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVA 414
            D+ K +AGRLRP+FLA C+ D S++  S          Y    +C G+  D+ + R SF SGH+SF      F  ++V  R        C  W ++L RP +Q  L A AL    TRV+D+ H+ SD++ G L G  VA
Sbjct:   89 DLAKYMAGRLRPNFLAVCDPDWSRVNCS---------VYVQVEVCRGSPADVTESRLSFYSGHSSFGMYCMMFLALYVQARL-------CWKW-ARLLRPTVQFFLVAFALYVGYTRVSDHKHHWSDVLVGLLQGALVA 210          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: A0A1R0H4M7_9FUNG (Lipid phosphate phosphatase 2 n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0H4M7_9FUNG)

HSP 1 Score: 85.9 bits (211), Expect = 2.870e-17
Identity = 59/151 (39.07%), Postives = 82/151 (54.30%), Query Frame = 1
Query:    4 VCKNLAGRLRPDFLARCNIDESKIRPSSN-----SSSNPIPTYYTQSICTGNEEDIA-DGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSK--LTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFVSSHV 432
            V KNLAGR RPDFLARC  D SKI   +      +S +P   +Y ++ICT  ++ I  +G RSFPSGHAS S  G  F    L  F AS L     +  K  + + VL  +   +A   A +R  DN H+  D++ G++LG  +AF   ++
Sbjct:  106 VIKNLAGRPRPDFLARCIPDLSKINDYTGFGPIPNSKDPFMGFYNRAICTNTDKSILYNGMRSFPSGHASASFCGLIF----LSLFLASHL---RLYNGKGYVYKAVLVSIPPLVASIIAVSRTFDNRHHWQDVLIGSILGSLIAFFCYYI 249          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: K7ENH4_HUMAN (Phospholipid phosphatase 2 (Fragment) n=2 Tax=Homininae TaxID=207598 RepID=K7ENH4_HUMAN)

HSP 1 Score: 82.4 bits (202), Expect = 3.080e-17
Identity = 54/140 (38.57%), Postives = 76/140 (54.29%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQ--SICTGNEEDIADGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVA 414
            D+ K + GRLRP+FLA C+ D S++  S           Y Q   +C GN  D+ + R SF SGH+SF   G + ++F L  +  + L  C  W ++L RP +Q  L A AL    TRV+D  H+ SD++ G L G  VA
Sbjct:    8 DLAKYMIGRLRPNFLAVCDPDWSRVNCS----------VYVQLEKVCRGNPADVTEARLSFYSGHSSF---GMYCMVF-LALYVQARL--CWKW-ARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVA 130          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: UPI00167F9BCD (phospholipid phosphatase 1 isoform X2 n=5 Tax=Cricetidae TaxID=337677 RepID=UPI00167F9BCD)

HSP 1 Score: 85.5 bits (210), Expect = 3.780e-17
Identity = 54/140 (38.57%), Postives = 74/140 (52.86%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQSICTGNEEDIADGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFV 420
            D+ K   GRLRP FLA C++D S+I    N S   I  Y    +C GNE+ + +GR SF SGH+SFS     F    L           G W ++L RP LQ  L AL++    +RV+D  H+ SD++ G + G  VA +
Sbjct:  117 DIAKYSIGRLRPHFLAVCDLDWSQI----NCSDGYIENY----VCRGNEDKVREGRLSFYSGHSSFSMYCMLFTALYLQARMK------GDW-ARLLRPTLQFGLVALSIYVGLSRVSDYKHHWSDVMVGLIQGAVVAIL 241          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: A0A0C9XUZ6_9AGAR (acidPPc domain-containing protein n=2 Tax=Laccaria TaxID=29882 RepID=A0A0C9XUZ6_9AGAR)

HSP 1 Score: 84.3 bits (207), Expect = 4.470e-17
Identity = 57/155 (36.77%), Postives = 83/155 (53.55%), Query Frame = 1
Query:   10 KNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQSICTGNEEDIADGRRSFPSGHASFSAAGCFFV-IFVLHRFAASSL-VPCGAWT---SKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFVSSHVLLSTPIARA 459
            K+  GRLRPDFLARC  D+                      CTG E+ I DGR+SFPSGH+S + +G F + +++  + AA    VP  A T   S++TR +L L+  + A   A +RV D  H+  D+I G+L+GIA A++   +    P + A
Sbjct:   57 KHRVGRLRPDFLARCKWDK------------------VLEACTGKEQTIVDGRKSFPSGHSSTAFSGMFLLSLWLAGQTAAWCFHVPRPARTISSSQMTRFILTLLPISWATFVAISRVEDYRHHKEDVIVGSLIGIASAWICYLIFWPNPFSAA 193          
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Match: A0A2K6PIK6_RHIRO (Phospholipid phosphatase 2 n=12 Tax=Cercopithecidae TaxID=9527 RepID=A0A2K6PIK6_RHIRO)

HSP 1 Score: 85.5 bits (210), Expect = 5.240e-17
Identity = 56/140 (40.00%), Postives = 77/140 (55.00%), Query Frame = 1
Query:    1 DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQ--SICTGNEEDIADGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSKLTRPVLQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVA 414
            D+ K + GRLRP+FLA C+ D S+I  S           Y Q   +C GN  D+ + R SF SGH+SF   G + ++F L  +  + L  CG W ++L RP +Q  L A AL    TRV+D  H+ SD++ G L G  VA
Sbjct:  134 DLAKYMIGRLRPNFLAVCDPDWSRINCS----------VYVQLEKVCRGNPADVTEARLSFYSGHSSF---GMYCMLF-LALYVQARL--CGKW-ARLLRPTVQFFLVAFALYVGYTRVSDYKHHWSDVLVGLLQGALVA 256          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120237.4180.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2T9Y9Y8_9FUNG1.110e-1937.91acidPPc domain-containing protein n=2 Tax=Harpella... [more]
A0A2H3J264_WOLCO3.070e-1934.94Acid phosphatase/Vanadium-dependent haloperoxidase... [more]
UPI00167F926E1.320e-1738.57phospholipid phosphatase 1 isoform X3 n=2 Tax=Neot... [more]
A0A7L4JH21_9PASS1.380e-1737.93PLPP2 phosphatase (Fragment) n=1 Tax=Pomatorhinus ... [more]
A0A384BG13_BALAS1.980e-1737.41phospholipid phosphatase 2 n=2 Tax=Artiodactyla Ta... [more]
A0A1R0H4M7_9FUNG2.870e-1739.07Lipid phosphate phosphatase 2 n=1 Tax=Smittium muc... [more]
K7ENH4_HUMAN3.080e-1738.57Phospholipid phosphatase 2 (Fragment) n=2 Tax=Homi... [more]
UPI00167F9BCD3.780e-1738.57phospholipid phosphatase 1 isoform X2 n=5 Tax=Cric... [more]
A0A0C9XUZ6_9AGAR4.470e-1736.77acidPPc domain-containing protein n=2 Tax=Laccaria... [more]
A0A2K6PIK6_RHIRO5.240e-1740.00Phospholipid phosphatase 2 n=12 Tax=Cercopithecida... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120237contigM-pyrifera_M_contig120237:77..538 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score88.2
Seed ortholog evalue3.7e-15
Seed eggNOG ortholog10116.ENSRNOP00000062843
Preferred namePPAP2A
KEGG rclassRC00017
KEGG koko:K01080
KEGG ReactionR02239,R04162,R06520,R06521,R06522
KEGG Pathwayko00561,ko00564,ko00565,ko00600,ko01100,ko01110,ko04072,ko04666,ko04975,ko05231,map00561,map00564,map00565,map00600,map01100,map01110,map04072,map04666,map04975,map05231
KEGG ModuleM00089
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005623,GO:0005886,GO:0005887,GO:0006629,GO:0006644,GO:0006793,GO:0006796,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008195,GO:0009987,GO:0016020,GO:0016021,GO:0016311,GO:0016787,GO:0016788,GO:0016791,GO:0019637,GO:0023052,GO:0030258,GO:0031224,GO:0031226,GO:0042577,GO:0042578,GO:0044237,GO:0044238,GO:0044255,GO:0044425,GO:0044459,GO:0044464,GO:0046839,GO:0050789,GO:0050794,GO:0050896,GO:0051716,GO:0065007,GO:0071704,GO:0071944
EggNOG free text desc.phosphatidate phosphatase activity
EggNOG OGs35DCV@314146,39JPQ@33154,3BD4S@33208,3CR4X@33213,3J3F5@40674,484FN@7711,48V5J@7742,4Q6HP@9989,COG0671@1,KOG3030@2759
EC3.1.3.4
COG Functional cat.I
Best tax levelRodentia
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size462
Cds size462
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815722.1861522-CDS-M-pyrifera_M_contig120237:76..5381622815722.1861522-CDS-M-pyrifera_M_contig120237:76..538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120237 77..538 -
1692277538.252874-CDS-M-pyrifera_M_contig120237:76..5381692277538.252874-CDS-M-pyrifera_M_contig120237:76..538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120237 77..538 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120237.4180.1prot_M-pyrifera_M_contig120237.4180.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig120237 77..538 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig120237.4180.1

>prot_M-pyrifera_M_contig120237.4180.1 ID=prot_M-pyrifera_M_contig120237.4180.1|Name=mRNA_M-pyrifera_M_contig120237.4180.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp
DVCKNLAGRLRPDFLARCNIDESKIRPSSNSSSNPIPTYYTQSICTGNEE
DIADGRRSFPSGHASFSAAGCFFVIFVLHRFAASSLVPCGAWTSKLTRPV
LQLVLAALALGTACTRVADNHHNISDIIPGALLGIAVAFVSSHVLLSTPI
ARAT
back to top

mRNA from alignment at M-pyrifera_M_contig120237:77..538-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig120237.4180.1 ID=mRNA_M-pyrifera_M_contig120237.4180.1|Name=mRNA_M-pyrifera_M_contig120237.4180.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=462bp|location=Sequence derived from alignment at M-pyrifera_M_contig120237:77..538- (Macrocystis pyrifera P11B4 male)
GACGTGTGCAAGAACCTGGCGGGTCGGCTGCGTCCAGACTTCCTTGCACG CTGCAACATAGACGAGTCAAAAATTCGACCCAGCTCCAACTCGAGCTCCA ACCCCATCCCGACCTACTACACCCAGTCGATCTGCACGGGCAACGAGGAG GACATTGCGGACGGGCGTCGCTCCTTCCCTTCGGGCCACGCTTCCTTCTC TGCGGCTGGGTGCTTTTTTGTGATTTTCGTCTTGCACCGATTTGCTGCCT CCTCGCTTGTGCCATGTGGTGCGTGGACCTCCAAACTCACGCGACCCGTG CTGCAGCTCGTGCTGGCTGCTCTGGCACTCGGAACAGCCTGCACTCGCGT CGCAGACAACCACCACAATATTTCAGACATTATCCCGGGCGCTTTGCTCG GCATAGCAGTGGCCTTCGTCTCCAGCCACGTGCTCCTCTCCACCCCGATC GCCAGAGCCACC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig120237:77..538-

>mRNA_M-pyrifera_M_contig120237.4180.1 ID=mRNA_M-pyrifera_M_contig120237.4180.1|Name=mRNA_M-pyrifera_M_contig120237.4180.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=924bp|location=Sequence derived from alignment at M-pyrifera_M_contig120237:77..538- (Macrocystis pyrifera P11B4 male)
GACGTGTGCAAGAACCTGGCGGGTCGGCTGCGTCCAGACTTCCTTGCACG
CTGCAACATAGACGAGTCAAAAATTCGACCCAGCTCCAACTCGAGCTCCA
ACCCCATCCCGACCTACTACACCCAGTCGATCTGCACGGGCAACGAGGAG
GACATTGCGGACGGGCGTCGCTCCTTCCCTTCGGGCCACGCTTCCTTCTC
TGCGGCTGGGTGCTTTTTTGTGATTTTCGTCTTGCACCGATTTGCTGCCT
CCTCGCTTGTGCCATGTGGTGCGTGGACCTCCAAACTCACGCGACCCGTG
CTGCAGCTCGTGCTGGCTGCTCTGGCACTCGGAACAGCCTGCACTCGCGT
CGCAGACAACCACCACAATATTTCAGACATTATCCCGGGCGCTTTGCTCG
GCATAGCAGTGGCCTTCGTCTCCAGCCACGTGCTCCTCTCCACCCCGATC
GCCAGAGCCACCGACGTGTGCAAGAACCTGGCGGGTCGGCTGCGTCCAGA
CTTCCTTGCACGCTGCAACATAGACGAGTCAAAAATTCGACCCAGCTCCA
ACTCGAGCTCCAACCCCATCCCGACCTACTACACCCAGTCGATCTGCACG
GGCAACGAGGAGGACATTGCGGACGGGCGTCGCTCCTTCCCTTCGGGCCA
CGCTTCCTTCTCTGCGGCTGGGTGCTTTTTTGTGATTTTCGTCTTGCACC
GATTTGCTGCCTCCTCGCTTGTGCCATGTGGTGCGTGGACCTCCAAACTC
ACGCGACCCGTGCTGCAGCTCGTGCTGGCTGCTCTGGCACTCGGAACAGC
CTGCACTCGCGTCGCAGACAACCACCACAATATTTCAGACATTATCCCGG
GCGCTTTGCTCGGCATAGCAGTGGCCTTCGTCTCCAGCCACGTGCTCCTC
TCCACCCCGATCGCCAGAGCCACC
back to top