mRNA_M-pyrifera_M_contig120234.4179.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig120234.4179.1
Unique NamemRNA_M-pyrifera_M_contig120234.4179.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A5A8D1D9_CAFRO (ADK_lid domain-containing protein n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8D1D9_CAFRO)

HSP 1 Score: 133 bits (334), Expect = 1.400e-36
Identity = 60/104 (57.69%), Postives = 83/104 (79.81%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKSSIEE 312
            +++ VPDE++  RITGR IHK SGR+YH +F PPKVAGKDDVTGE LIQRSDD  D V+ RL TF  QT+PVIAYY ++GK+  ++ ++S+DAVW+ + +S+++
Sbjct:  139 IQMDVPDELLHARITGRYIHKASGRSYHTEFNPPKVAGKDDVTGEPLIQRSDDKPDNVARRLATFREQTEPVIAYYAAQGKVVKVNADQSIDAVWTDITASMDK 242          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A662Y5V1_9STRA (ADK_lid domain-containing protein (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y5V1_9STRA)

HSP 1 Score: 130 bits (326), Expect = 6.830e-36
Identity = 59/102 (57.84%), Postives = 76/102 (74.51%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKSSI 306
            V   VPDEV+ +RI+GRR+H  SGR+YHV F PPKVAGKDDVTGE LIQR DDN D +SSRL  FH QT PVI +Y+ +GKL  ++ + +MD+V   ++ S+
Sbjct:   97 VNFNVPDEVLVERISGRRVHPASGRSYHVKFNPPKVAGKDDVTGEPLIQRKDDNVDTLSSRLQAFHKQTQPVINFYRKQGKLTEVNAHTNMDSVTEQIRESL 198          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A2D4RRB0_9DELT (Adenylate kinase n=5 Tax=Proteobacteria TaxID=1224 RepID=A0A2D4RRB0_9DELT)

HSP 1 Score: 125 bits (315), Expect = 4.320e-34
Identity = 54/102 (52.94%), Postives = 81/102 (79.41%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKSSI 306
            ++++V D+++ +R+TGRRIHKPSGR+YH+ F PP+V GKD VTGEDLIQR DDN D +  RL+T+H+QT P+I YY ++G L S++G   +D V+S+++ +I
Sbjct:  111 IQLEVDDDLLVERVTGRRIHKPSGRSYHIKFNPPQVEGKDXVTGEDLIQRPDDNEDTIRERLNTYHSQTAPLIDYYGNQGILRSVNGMLGLDEVYSAIRGAI 212          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A354FI88_9DELT (Adenylate kinase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A354FI88_9DELT)

HSP 1 Score: 125 bits (315), Expect = 4.440e-34
Identity = 55/102 (53.92%), Postives = 81/102 (79.41%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKSSI 306
            +E +V +E V +RI+GRRIH+ SGRTYHV+F PPK  G+DDVTGE L+QR DDNAD V +RL+ +H QT P+++YY ++G L SIDG +S + V++S+++++
Sbjct:  111 IEFQVDNETVVQRISGRRIHQSSGRTYHVEFNPPKQEGRDDVTGEPLVQREDDNADTVRNRLNAYHEQTAPLVSYYSNKGNLVSIDGMQSPEEVYTSLRNTL 212          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A067C4L8_SAPPC (Adenylate kinase B n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067C4L8_SAPPC)

HSP 1 Score: 124 bits (310), Expect = 5.670e-33
Identity = 58/102 (56.86%), Postives = 71/102 (69.61%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKSSI 306
            V   +PD+V+ +RI GRRIH  SGR+YHV F PP+V G DDVTGE LIQR DDN D +S+RL  FH QT PVI YY  +GKL  +D N SMD V   ++ S+
Sbjct:  142 VNFNIPDQVLVERIAGRRIHVSSGRSYHVKFNPPQVEGIDDVTGEPLIQRKDDNVDTLSTRLDAFHKQTQPVIDYYAKQGKLVEVDANISMDTVTGQIRESM 243          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A1S7HEU4_9SACH (Adenylate kinase n=3 Tax=Zygosaccharomyces TaxID=4953 RepID=A0A1S7HEU4_9SACH)

HSP 1 Score: 123 bits (308), Expect = 6.700e-33
Identity = 53/98 (54.08%), Postives = 73/98 (74.49%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSV 294
            VE+K+ DE++  RITGR +H  SGR+YH  F PPKV GKDDVTGEDL+QRSDDNA+A+  RL ++H QT+P++ YYK +G  A +D +++   VW  +
Sbjct:  120 VELKIDDELLVSRITGRLVHPASGRSYHKSFNPPKVEGKDDVTGEDLVQRSDDNAEALKKRLGSYHDQTEPIVNYYKEKGIWAGVDASQNPAKVWGDI 217          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: KAD2_SCHPO (Adenylate kinase n=1 Tax=Schizosaccharomyces pombe (strain 972 / ATCC 24843) TaxID=284812 RepID=KAD2_SCHPO)

HSP 1 Score: 122 bits (307), Expect = 8.330e-33
Identity = 55/104 (52.88%), Postives = 78/104 (75.00%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKSSIEE 312
            +E++V DE++ +RITGR +H  SGR+YH++F PPKV  KDDVTGE LIQRSDDNADA+  RL T+H QT PV+ +YK +GK A++D  +  + VW  + + +E+
Sbjct:  115 LELQVDDELLVRRITGRLVHPGSGRSYHLEFNPPKVPMKDDVTGEPLIQRSDDNADALRKRLVTYHEQTTPVVEFYKKKGKWAAVDAAQKPEQVWEQIVAILEK 218          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A448YRM8_BRENA (DEKNAAC104646 n=1 Tax=Brettanomyces naardenensis TaxID=13370 RepID=A0A448YRM8_BRENA)

HSP 1 Score: 122 bits (305), Expect = 1.630e-32
Identity = 52/103 (50.49%), Postives = 75/103 (72.82%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKSSIE 309
            VE+K+ DE++  RITGR +H PSGR+YH  F PPKV GKDD+TGE L+QRSDDN +A+  RL T+H QT+P++ YYK  G  A +D +++ + VW  +  +++
Sbjct:  117 VELKIDDELLVARITGRLVHPPSGRSYHKLFNPPKVEGKDDITGEPLVQRSDDNEEALKKRLLTYHKQTEPIVEYYKKTGIWAGVDASQAPEQVWKDILEALQ 219          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A1R2CMB1_9CILI (Guanylate kinase-like domain-containing protein n=1 Tax=Stentor coeruleus TaxID=5963 RepID=A0A1R2CMB1_9CILI)

HSP 1 Score: 122 bits (306), Expect = 2.150e-32
Identity = 50/99 (50.51%), Postives = 74/99 (74.75%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVK 297
            +E  +PD+V+ +RITGRRIH  SGR+YH+ F PPKV G DD+TGE LI R+DD  +A+  R++++H  T P++ YYK +G+ A +D NR++D VW+ +K
Sbjct:  140 IEFDIPDQVLVERITGRRIHLASGRSYHIKFAPPKVEGIDDITGEPLIHRTDDTEEALMKRMNSYHANTGPILDYYKQKGRFAKVDANRNVDDVWNDLK 238          
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Match: A0A4C2E6W3_9SACH (Adenylate kinase n=4 Tax=Zygosaccharomyces TaxID=4953 RepID=A0A4C2E6W3_9SACH)

HSP 1 Score: 121 bits (304), Expect = 2.550e-32
Identity = 55/98 (56.12%), Postives = 71/98 (72.45%), Query Frame = 1
Query:    1 VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQRSDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSV 294
            VE+KV DE++  RITGR IH  SGR+YH  F PPKV GKDDVTG+DL+QRSDDNADA+  RL ++H QT+P++ YY+  G  A +D  +S   VW  +
Sbjct:  118 VELKVDDELLVSRITGRLIHPASGRSYHKTFNPPKVEGKDDVTGDDLVQRSDDNADALKKRLSSYHAQTEPIVNYYQKSGIWAGVDAAQSPFKVWGDI 215          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120234.4179.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D1D9_CAFRO1.400e-3657.69ADK_lid domain-containing protein n=2 Tax=Sar TaxI... [more]
A0A662Y5V1_9STRA6.830e-3657.84ADK_lid domain-containing protein (Fragment) n=1 T... [more]
A0A2D4RRB0_9DELT4.320e-3452.94Adenylate kinase n=5 Tax=Proteobacteria TaxID=1224... [more]
A0A354FI88_9DELT4.440e-3453.92Adenylate kinase n=2 Tax=Proteobacteria TaxID=1224... [more]
A0A067C4L8_SAPPC5.670e-3356.86Adenylate kinase B n=4 Tax=Saprolegniaceae TaxID=4... [more]
A0A1S7HEU4_9SACH6.700e-3354.08Adenylate kinase n=3 Tax=Zygosaccharomyces TaxID=4... [more]
KAD2_SCHPO8.330e-3352.88Adenylate kinase n=1 Tax=Schizosaccharomyces pombe... [more]
A0A448YRM8_BRENA1.630e-3250.49DEKNAAC104646 n=1 Tax=Brettanomyces naardenensis T... [more]
A0A1R2CMB1_9CILI2.150e-3250.51Guanylate kinase-like domain-containing protein n=... [more]
A0A4C2E6W3_9SACH2.550e-3256.12Adenylate kinase n=4 Tax=Zygosaccharomyces TaxID=4... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120234contigM-pyrifera_M_contig120234:218..538 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score124.0
Seed ortholog evalue4.2e-26
Seed eggNOG ortholog112098.XP_008618104.1
Preferred nameADK1
KEGG rclassRC00002
KEGG koko:K00939
KEGG ReactionR00127,R01547,R11319
KEGG Pathwayko00230,ko00730,ko01100,ko01110,ko01130,map00230,map00730,map01100,map01110,map01130
KEGG ModuleM00049
Hectar predicted targeting categoryother localisation
GOsGO:0000166,GO:0000287,GO:0001889,GO:0002244,GO:0002376,GO:0002520,GO:0002521,GO:0003674,GO:0003824,GO:0004017,GO:0005488,GO:0005507,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005739,GO:0005740,GO:0005743,GO:0005758,GO:0005773,GO:0005774,GO:0005829,GO:0005929,GO:0006091,GO:0006119,GO:0006139,GO:0006144,GO:0006163,GO:0006164,GO:0006166,GO:0006172,GO:0006259,GO:0006260,GO:0006261,GO:0006270,GO:0006412,GO:0006518,GO:0006629,GO:0006644,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0008144,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009112,GO:0009116,GO:0009117,GO:0009119,GO:0009123,GO:0009124,GO:0009126,GO:0009127,GO:0009132,GO:0009133,GO:0009135,GO:0009136,GO:0009141,GO:0009144,GO:0009150,GO:0009151,GO:0009152,GO:0009156,GO:0009161,GO:0009163,GO:0009165,GO:0009167,GO:0009168,GO:0009179,GO:0009180,GO:0009185,GO:0009188,GO:0009199,GO:0009200,GO:0009205,GO:0009215,GO:0009259,GO:0009260,GO:0009262,GO:0009394,GO:0009719,GO:0009725,GO:0009966,GO:0009968,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010467,GO:0010646,GO:0010648,GO:0015949,GO:0015950,GO:0015951,GO:0016020,GO:0016070,GO:0016208,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0017076,GO:0017144,GO:0018130,GO:0019205,GO:0019438,GO:0019538,GO:0019637,GO:0019692,GO:0019693,GO:0019866,GO:0023051,GO:0023057,GO:0030097,GO:0030154,GO:0030554,GO:0031090,GO:0031514,GO:0031966,GO:0031967,GO:0031970,GO:0031974,GO:0031975,GO:0032501,GO:0032502,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032878,GO:0034404,GO:0034641,GO:0034645,GO:0034654,GO:0035639,GO:0036094,GO:0036126,GO:0042221,GO:0042278,GO:0042451,GO:0042455,GO:0042995,GO:0043043,GO:0043094,GO:0043101,GO:0043167,GO:0043168,GO:0043169,GO:0043170,GO:0043174,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044271,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044429,GO:0044437,GO:0044441,GO:0044444,GO:0044446,GO:0044463,GO:0044464,GO:0046031,GO:0046033,GO:0046034,GO:0046060,GO:0046083,GO:0046128,GO:0046129,GO:0046390,GO:0046483,GO:0046686,GO:0046872,GO:0046914,GO:0046940,GO:0048513,GO:0048519,GO:0048523,GO:0048534,GO:0048583,GO:0048585,GO:0048731,GO:0048732,GO:0048856,GO:0048863,GO:0048869,GO:0050145,GO:0050789,GO:0050794,GO:0050896,GO:0055086,GO:0060218,GO:0060322,GO:0061008,GO:0065007,GO:0070013,GO:0071704,GO:0072521,GO:0072522,GO:0090036,GO:0090038,GO:0090304,GO:0090407,GO:0097066,GO:0097159,GO:0097223,GO:0097226,GO:0097367,GO:0097729,GO:0098588,GO:0098805,GO:0120025,GO:0120038,GO:1901135,GO:1901137,GO:1901265,GO:1901293,GO:1901360,GO:1901362,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1901659,GO:1902531,GO:1902532,GO:2000114
EggNOG free text desc.adenylate kinase activity
EggNOG OGsCOG0563@1,KOG3078@2759
EC2.7.4.3
COG Functional cat.F
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Exons1
Model size321
Cds size321
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815722.1435559-CDS-M-pyrifera_M_contig120234:217..5381622815722.1435559-CDS-M-pyrifera_M_contig120234:217..538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120234 218..538 -
1692277538.2390072-CDS-M-pyrifera_M_contig120234:217..5381692277538.2390072-CDS-M-pyrifera_M_contig120234:217..538Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig120234 218..538 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120234.4179.1prot_M-pyrifera_M_contig120234.4179.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig120234 218..538 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig120234.4179.1

>prot_M-pyrifera_M_contig120234.4179.1 ID=prot_M-pyrifera_M_contig120234.4179.1|Name=mRNA_M-pyrifera_M_contig120234.4179.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp
VEVKVPDEVVAKRITGRRIHKPSGRTYHVDFKPPKVAGKDDVTGEDLIQR
SDDNADAVSSRLHTFHTQTDPVIAYYKSRGKLASIDGNRSMDAVWSSVKS
SIEERS*
back to top

mRNA from alignment at M-pyrifera_M_contig120234:218..538-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig120234.4179.1 ID=mRNA_M-pyrifera_M_contig120234.4179.1|Name=mRNA_M-pyrifera_M_contig120234.4179.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig120234:218..538- (Macrocystis pyrifera P11B4 male)
GTGGAAGTGAAGGTACCTGATGAAGTAGTTGCAAAGCGTATCACAGGCCG TCGCATTCACAAGCCATCTGGTCGCACATACCACGTGGACTTCAAGCCAC CCAAAGTTGCAGGCAAAGACGATGTCACTGGTGAAGATTTGATCCAACGT TCCGATGACAACGCTGACGCAGTCTCTTCCAGGCTTCACACATTCCACAC TCAGACTGACCCAGTGATTGCGTACTACAAGAGCCGTGGTAAGCTCGCCA GCATTGATGGCAACCGCAGCATGGATGCTGTGTGGTCTTCTGTCAAGTCT TCCATTGAAGAGCGTTCGTAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig120234:218..538-

>mRNA_M-pyrifera_M_contig120234.4179.1 ID=mRNA_M-pyrifera_M_contig120234.4179.1|Name=mRNA_M-pyrifera_M_contig120234.4179.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig120234:218..538- (Macrocystis pyrifera P11B4 male)
GTGGAAGTGAAGGTACCTGATGAAGTAGTTGCAAAGCGTATCACAGGCCG
TCGCATTCACAAGCCATCTGGTCGCACATACCACGTGGACTTCAAGCCAC
CCAAAGTTGCAGGCAAAGACGATGTCACTGGTGAAGATTTGATCCAACGT
TCCGATGACAACGCTGACGCAGTCTCTTCCAGGCTTCACACATTCCACAC
TCAGACTGACCCAGTGATTGCGTACTACAAGAGCCGTGGTAAGCTCGCCA
GCATTGATGGCAACCGCAGCATGGATGCTGTGTGGTCTTCTGTCAAGTCT
TCCATTGAAGAGCGTTCGTAAGTGGAAGTGAAGGTACCTGATGAAGTAGT
TGCAAAGCGTATCACAGGCCGTCGCATTCACAAGCCATCTGGTCGCACAT
ACCACGTGGACTTCAAGCCACCCAAAGTTGCAGGCAAAGACGATGTCACT
GGTGAAGATTTGATCCAACGTTCCGATGACAACGCTGACGCAGTCTCTTC
CAGGCTTCACACATTCCACACTCAGACTGACCCAGTGATTGCGTACTACA
AGAGCCGTGGTAAGCTCGCCAGCATTGATGGCAACCGCAGCATGGATGCT
GTGTGGTCTTCTGTCAAGTCTTCCATTGAAGAGCGTTCGTAA
back to top