mRNA_M-pyrifera_M_contig120224.4174.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: A0A813C7E5_9DINO (DnaJ protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813C7E5_9DINO) HSP 1 Score: 182 bits (463), Expect = 3.680e-54 Identity = 87/182 (47.80%), Postives = 122/182 (67.03%), Query Frame = 1
Query: 1 NGFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYKALR-----SIETG 531
NGF + +TC G G + +PC+T G G V + VEV PPGVDTG T+RLAG+GD G GG G+LY+Q+ V P F+R G+D+HV VP+S++Q ALG + VPT+ G VDL IP TQP+ ++ MR KG+P++ GSG+GNQ VH K+ +PT L+ ++ +L+ AL ++ETG
Sbjct: 85 NGFFAVTSTCPSXXGEGTTIANPCRTCTGSGAVQQSKTVEVKIPPGVDTGTTMRLAGEGDVGDLGGPPGHLYLQIKVQADPFFKRKGSDVHVNVPLSISQVALGCTITVPTVGGEVDLRIPPGTQPSDKLVMRNKGIPRVSGSGSGNQYVHVKLTVPTKLTAKQRELFTALAEEEGDAVETG 266
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: M2XYK2_GALSU (Molecular chaperone DnaJ n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2XYK2_GALSU) HSP 1 Score: 187 bits (476), Expect = 4.600e-52 Identity = 87/170 (51.18%), Postives = 119/170 (70.00%), Query Frame = 1
Query: 4 GFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYKAL 513
GF TTCR+CGG+G+++ DPC G GV +G R V V PPGVDTG TLR+A +G+AG+RGGG G+L+V++HV F R+GADLHV PI+ AQAALGG V V T+ G +++ IP +Q N +RG+G+PK+G G G+Q VHF+V +PT LS ++ +L + L
Sbjct: 664 GFFAFETTCRKCGGSGQIIRDPCGACNGTGVTTGSRSVRVKVPPGVDTGTTLRVAKKGEAGLRGGGAGDLFVRIHVAEDEYFHREGADLHVVAPITFAQAALGGTVRVRTLDGEIEVKIPSGSQSNDMKVIRGRGLPKIGSGGYGSQYVHFQVVVPTQLSPKQRQLIEEL 833
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: L8HJD7_ACACA (Chaperone protein DnaJ, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HJD7_ACACA) HSP 1 Score: 176 bits (446), Expect = 3.670e-50 Identity = 79/169 (46.75%), Postives = 123/169 (72.78%), Query Frame = 1
Query: 1 NGFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGS-VDLTIPKPTQPNQRVAMRGKGVPKLGGSGA-GNQIVHFKVQIPTTLSEQEEKL 501
+GF+ + T CR+CGG G ++ DPC T G+G++SG R ++V P GVD G +RL GQGDAG++GG GNL+++VHV+P VF+RDG ++H +P+++AQA LGG V+VPT+ G+ V++ +P TQP ++ +R +GV +G G G+ +HFKV+IPT L+ ++++L
Sbjct: 246 HGFIPIATQCRQCGGEGTIISDPCGTCKGQGIISGNRKIQVKIPAGVDDGANIRLVGQGDAGMKGGKPGNLFLRVHVSPDKVFKRDGVNVHTDIPVTLAQAVLGGTVKVPTLSGAEVEIKVPPGTQPEEKRVLRNQGVSAVGQPGTKGHHYIHFKVEIPTKLTPKQKEL 414
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: F0ZHG2_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZHG2_DICPU) HSP 1 Score: 175 bits (444), Expect = 1.050e-49 Identity = 77/169 (45.56%), Postives = 120/169 (71.01%), Query Frame = 1
Query: 1 NGFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYK 507
NGF +M +TCR C G+G+V+ + C TX G+GV G+R V + PPG++ G ++R+ GQG+ G++GG +GNL+V V V+ H +F+R G D+H+ VPI++AQA LG V +PT+ G VDL +PK TQP ++ ++ KG+P + +G G+Q +HF V IP ++ ++E+L K
Sbjct: 248 NGFFQMASTCRTCKGSGKVIKEHCSTXKGKGVNQGQRTVNIKVPPGINNGSSIRVPGQGEPGLKGGRRGNLFVNVTVSEHELFRRQGNDIHLDVPITLAQAILGDTVTIPTLSGEVDLKVPKGTQPGEKRVLKNKGIPSVNSNGTGSQYIHFIVNIPKNINSKQEELIK 416
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: A0A7C4Z724_9BACT (Chaperone protein DnaJ n=1 Tax=Gemmataceae bacterium TaxID=2052164 RepID=A0A7C4Z724_9BACT) HSP 1 Score: 172 bits (435), Expect = 3.690e-49 Identity = 81/174 (46.55%), Postives = 120/174 (68.97%), Query Frame = 1
Query: 4 GFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYKALRSIE 525
G L+M+TTCR C G G+V+ +PC G G+V R ++V P GVDTG+ +R++G+GDAG G +G+LY+QV V H +F+R+G +L VPIS +QAALGG +EVPT+QG +T+P+ TQ + V +RGKG+P + G G G+ IV V+ P L++++E+L++ L IE
Sbjct: 172 GILQMQTTCRACDGRGQVISEPCDRCGGHGLVKARRKLDVQIPAGVDTGIRIRISGEGDAGEAGAPRGDLYLQVRVREHKLFRREGLNLICQVPISFSQAALGGEIEVPTLQGKETITLPRGTQHGEEVLLRGKGMPDVRGRGRGDLIVQIMVETPRKLTKRQEELFRELAEIE 345
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: T0RHV0_9PROT (DnaJ C-terminal domain protein n=2 Tax=Bacteriovorax sp. DB6_IX TaxID=1353530 RepID=T0RHV0_9PROT) HSP 1 Score: 166 bits (421), Expect = 4.320e-48 Identity = 77/176 (43.75%), Postives = 119/176 (67.61%), Query Frame = 1
Query: 4 GFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYKALRSIETG 531
GF + +TC +C G+G+++ DPC T G+G + +EV+ P G+D G L+L+ +GD+G +GG G+LY+ + + PH +FQRDG ++H TVPIS +QAALG VEVPT+ G V + IP TQ +++ +RGKG+ KLGG G G+ I+ V+ PT LS ++++L++ L +E
Sbjct: 98 GFFTVASTCPKCSGSGQMISDPCGTCHGDGRTKKKVELEVTVPAGIDEGQRLKLSSEGDSGAQGGPDGDLYIVIDIAPHEIFQRDGFNVHYTVPISFSQAALGSEVEVPTLDGKVMVEIPAGTQSGKKMRLRGKGIQKLGGYGQGDAILSIHVETPTKLSGEQKELFEQLAGLEAS 273
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: A0A3D3S1G4_9GAMM (Chaperone protein DnaJ n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D3S1G4_9GAMM) HSP 1 Score: 169 bits (427), Expect = 4.760e-48 Identity = 79/170 (46.47%), Postives = 115/170 (67.65%), Query Frame = 1
Query: 4 GFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYKAL 513
GF ++ TC C G G+V+ DPC G G V + +EV PPGVDTG +RLAG+G+AG RGG G+LYV +H+ PH +F+RDG+DL+ VPISV AALGG ++VP+++G +++T+P TQ + +RGKG+P + G G G+ +V V+ P L E++E+L + L
Sbjct: 172 GFFSLQQTCPTCRGTGQVIRDPCVDCHGAGRVQKPKKLEVKIPPGVDTGDRIRLAGEGEAGRRGGRPGDLYVDIHLRPHALFERDGSDLYTEVPISVVTAALGGELDVPSLEGRLNVTVPAGTQTGRVFRLRGKGMPSVRGGGVGDLMVRVSVETPVNLDERQERLLREL 341
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: A0A419GDM4_9FIRM (Chaperone protein DnaJ n=1 Tax=Peptococcaceae bacterium TaxID=2052179 RepID=A0A419GDM4_9FIRM) HSP 1 Score: 167 bits (424), Expect = 1.460e-47 Identity = 83/168 (49.40%), Postives = 111/168 (66.07%), Query Frame = 1
Query: 4 GFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYK 507
G + TC RC GAG ++ PC T G G V R V++ PPGV +G LRLAG+G+ G RGG G+LYV ++V PHPVF R+G D+ VP+S QAALGG VEVPT++G V L +P+ TQP +RGKG+P L G G G+Q V KV +PT L+E++++L +
Sbjct: 175 GRIVQSHTCDRCHGAGRIIEKPCPTCRGSGHVRRTRSVQIKVPPGVGSGSRLRLAGEGEVGERGGPSGDLYVYIYVKPHPVFIREGDDIICEVPVSFGQAALGGEVEVPTLEGQVSLKVPEGTQPGTLFRLRGKGIPHLNGYGRGDQHVRVKVVVPTRLNERQKELLR 342
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: A0A661K7X5_9DELT (Chaperone protein DnaJ n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661K7X5_9DELT) HSP 1 Score: 167 bits (422), Expect = 2.530e-47 Identity = 80/175 (45.71%), Postives = 112/175 (64.00%), Query Frame = 1
Query: 1 NGFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYKALRSIE 525
+GF + TTC C G G V+ PCK G+G V + V + PPGVDTG LRL G+G+ G RGG G+LYV +HV PH F+R+G D+ VPI AALGG +EVPT+ G+ + IP+ TQP + ++G+G+P L G G G+QI+ VQ+P LS+++E+L + S+E
Sbjct: 174 HGFFTISTTCSYCHGEGRVITTPCKACGGQGWVKKRKKVSLRIPPGVDTGSRLRLRGEGEEGERGGPPGDLYVIIHVEPHEFFEREGDDIICRVPIPFTMAALGGEIEVPTLDGTKRIQIPRGTQPGEIFRLKGEGIPHLNGRGRGDQIIQILVQVPQKLSKEQERLLREFASLE 348
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Match: A0A7V7F0U1_9DELT (Chaperone protein DnaJ n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V7F0U1_9DELT) HSP 1 Score: 167 bits (422), Expect = 3.420e-47 Identity = 79/174 (45.40%), Postives = 113/174 (64.94%), Query Frame = 1
Query: 4 GFLEMRTTCRRCGGAGEVVLDPCKTXXGEGVVSGERVVEVSFPPGVDTGVTLRLAGQGDAGVRGGGKGNLYVQVHVTPHPVFQRDGADLHVTVPISVAQAALGGAVEVPTIQGSVDLTIPKPTQPNQRVAMRGKGVPKLGGSGAGNQIVHFKVQIPTTLSEQEEKLYKALRSIE 525
GF ++TTC C GAGE++ DPC G G+V+ + V + P G++TG +RL G+G+ G +GG G+LYV ++V H F RDG ++H P+++AQAALG VEVPT+ GSV+L IP TQP Q ++G+GVP L G G G+ IV K+ IP L +++++L K IE
Sbjct: 178 GFFRVQTTCPNCNGAGEIIADPCNDCDGVGLVNKTKKVSLKIPAGINTGARMRLRGEGEGGRKGGEAGDLYVVIYVEDHEFFMRDGNNIHCDFPLTIAQAALGATVEVPTVHGSVELKIPAGTQPEQIFTIKGEGVPSLRGGGRGDMIVRSKIIIPKKLDKRQKELLKEFEEIE 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120224.4174.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120224.4174.1 >prot_M-pyrifera_M_contig120224.4174.1 ID=prot_M-pyrifera_M_contig120224.4174.1|Name=mRNA_M-pyrifera_M_contig120224.4174.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp MRTTCRRCGGAGEVVLDPCKTCGGEGVVSGERVVEVSFPPGVDTGVTLRLback to top mRNA from alignment at M-pyrifera_M_contig120224:2..538- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120224.4174.1 ID=mRNA_M-pyrifera_M_contig120224.4174.1|Name=mRNA_M-pyrifera_M_contig120224.4174.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig120224:2..538- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120224:2..538- >mRNA_M-pyrifera_M_contig120224.4174.1 ID=mRNA_M-pyrifera_M_contig120224.4174.1|Name=mRNA_M-pyrifera_M_contig120224.4174.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig120224:2..538- (Macrocystis pyrifera P11B4 male)back to top |