mRNA_M-pyrifera_M_contig120201.4168.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: UPI00029AAFB2 (dihydrodipicolinate synthase family protein n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI00029AAFB2) HSP 1 Score: 96.3 bits (238), Expect = 3.530e-21 Identity = 78/283 (27.56%), Postives = 96/283 (33.92%), Query Frame = 1
Query: 7 ELARVDGIRGVTCNGHTIEIMLLGPADRARVMRIVSVAVGAANAETGRPVKAISGVSEEGSQEGIEQALA-----------------------------------------------------------------------------------------------------------------------------------------------------------RIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIKISSESLGYVC 390
ELARVDG++G+TCNGHT EIM L P +RA+V R+ + AV AAN ETGR VK ISGVS EGS E I+ ALA R++YNFGEPGC H RMKV R ++ KFPSP FRRP+R L ++ R++ E LG+ C
Sbjct: 36 ELARVDGVQGLTCNGHTGEIMSLRPEERAKVTRVCAEAVRAANKETGRQVKVISGVSAEGSLEAIDHALAAKEAGADAILLMPPHHWLRFGRSPKTAVGFIQDVAEGANIKIVIHQYPGWTKAGYSLGEMLEMVKLPQVVTIKMGTRDMARWLYEYEQLKKAAPHVSIITCHDEFLLPSLIEGCDGALIGFAGFAPELMIKIVHCALDGDLAGAKQAQKLVAPLARLIYNFGEPGCGAHQRMKVARWLMNKFPSPRFRRPVRPLPGEDVARMRNELEQLGFPC 318
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A7Y5C8J3_9BACT (Dihydrodipicolinate synthase family protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C8J3_9BACT) HSP 1 Score: 88.6 bits (218), Expect = 2.790e-18 Identity = 36/61 (59.02%), Postives = 49/61 (80.33%), Query Frame = 1
Query: 211 LARIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIKISSESLGYVCP 393
LARI+YNFGEPGC H RMKV R ++G+FPSPHFRRP+R L+ +I++I+ E++G+ CP
Sbjct: 255 LARIIYNFGEPGCGAHQRMKVARWLMGRFPSPHFRRPVRPLAPEQIDQIRKDLEAIGFECP 315
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A7C1HFI6_9BACT (Dihydrodipicolinate synthase family protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A7C1HFI6_9BACT) HSP 1 Score: 79.0 bits (193), Expect = 8.330e-16 Identity = 35/59 (59.32%), Postives = 45/59 (76.27%), Query Frame = 1
Query: 211 LARIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIKISSESLGYV 387
LAR++YNFGEPGC H RMKV ++GKF SP FRRPIR L E +IERI+ + + +GY+
Sbjct: 106 LARLIYNFGEPGCSAHQRMKVALWMMGKFSSPVFRRPIRPLHEDQIERIRRALQDIGYL 164
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A838QW41_9BACT (Dihydrodipicolinate synthase family protein n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A838QW41_9BACT) HSP 1 Score: 79.3 bits (194), Expect = 7.060e-15 Identity = 42/70 (60.00%), Postives = 49/70 (70.00%), Query Frame = 1
Query: 7 ELARVDGIRGVTCNGHTIEIMLLGPADRARVMRIVSVAVGAANAETGRPVKAISGVSEEGSQEGIEQALA 216
ELA VDG+ G+TCNGHT E+M L P +RARV R+ AV N TGR V+ ISGVS EGS E I+ ALA
Sbjct: 36 ELAEVDGVEGLTCNGHTGEVMSLRPEERARVTRLCVKAVRQVNERTGRRVRVISGVSAEGSLEAIDHALA 105
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A6B1CQH1_9BACT (Dihydrodipicolinate synthase family protein n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A6B1CQH1_9BACT) HSP 1 Score: 79.0 bits (193), Expect = 9.610e-15 Identity = 78/284 (27.46%), Postives = 90/284 (31.69%), Query Frame = 1
Query: 1 IDELARVDGIRGVTCNGHTIEIMLLGPADRARVMRIVSVAVGAANAETGRPVKAISGVSEEGSQEGIEQALA----------------------------------------------------------------------------------------------------------------------------------------------------------RIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIKISSESLGYVC 390
I ELA VDG+ G+TCNGHT EIM L PA+R RV +IV+ V AA GR VK ISGVS EGS EGI+ ALA RIVY FGEP H RMK R ++GKFPSP RRP+R L+ EI I+ E+LGY C
Sbjct: 37 IAELAAVDGVDGLTCNGHTGEIMSLRPAERNRVTQIVAETVKAA----GRTVKTISGVSVEGSLEGIDHALAAKDAGADAILLMPPHHWLRFGRSSQTAVGFFEDVASAGIDIVVHQYPAWTKAGYTLDEMKALVQIPRVKCIKMGTRDMSRWLYDYQELKKVNSDVPIITCHDEFLLPSLLEAADGALVGFAGFVPELIVELVQRALDGDLAGAKEVQKKVEPLNRIVYAFGEPSSSAHQRMKCARWLLGKFPSPKMRRPLRDLAPAEIAGIRQGLEALGYEC 316
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A3A0ED40_9BACT (Dihydrodipicolinate synthase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0ED40_9BACT) HSP 1 Score: 78.2 bits (191), Expect = 2.850e-14 Identity = 31/50 (62.00%), Postives = 42/50 (84.00%), Query Frame = 1
Query: 211 LARIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIK 360
LAR++YNFGEPGC H RMKV R ++G+FPSP FRRPIR LS+ +++R++
Sbjct: 328 LARLIYNFGEPGCAAHQRMKVARWLLGRFPSPQFRRPIRPLSDADVDRLR 377
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A496AIP6_9BACT (Dihydrodipicolinate synthase family protein n=12 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A496AIP6_9BACT) HSP 1 Score: 77.0 bits (188), Expect = 4.720e-14 Identity = 35/61 (57.38%), Postives = 43/61 (70.49%), Query Frame = 1
Query: 208 ALARIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIKISSESLGYVC 390
ALARIVYNFGEP D H RMK R ++G+FPS RRP+R LS E+ +I+ S E+ GY C
Sbjct: 253 ALARIVYNFGEPSSDAHQRMKCARWLMGRFPSMTMRRPLRQLSTAEVGKIRASLEATGYQC 313
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A2E7JM21_9BACT (Dihydrodipicolinate synthase family protein n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2E7JM21_9BACT) HSP 1 Score: 75.9 bits (185), Expect = 1.270e-13 Identity = 43/72 (59.72%), Postives = 53/72 (73.61%), Query Frame = 1
Query: 1 IDELARVDGIRGVTCNGHTIEIMLLGPADRARVMRIVSVAVGAANAETGRPVKAISGVSEEGSQEGIEQALA 216
I ELA V+G++G+TCNGHT EIM L A+R RV +IV+ A+ A TGR +K ISGVS EGS EGI+ ALA
Sbjct: 35 IAELASVEGVKGLTCNGHTGEIMSLRFAERNRVTQIVAAAIKA----TGRDIKTISGVSAEGSLEGIDHALA 102
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A5C6CU01_9BACT (Putative DapA-like lyase n=3 Tax=Bythopirellula TaxID=1400386 RepID=A0A5C6CU01_9BACT) HSP 1 Score: 75.5 bits (184), Expect = 1.720e-13 Identity = 30/50 (60.00%), Postives = 39/50 (78.00%), Query Frame = 1
Query: 211 LARIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIK 360
LA ++Y+FGEPGC H RMKV R ++GKFPSPHFRRP+ L E+E+I+
Sbjct: 255 LAHLIYDFGEPGCGAHQRMKVARWLLGKFPSPHFRRPVNPLPATEVEKIR 304
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Match: A0A2D5YZL0_9PLAN (Dihydrodipicolinate synthase family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D5YZL0_9PLAN) HSP 1 Score: 73.9 bits (180), Expect = 7.810e-13 Identity = 31/58 (53.45%), Postives = 43/58 (74.14%), Query Frame = 1
Query: 211 LARIVYNFGEPGCDVHPRMKVDRCVIGKFPSPHFRRPIRSLSEVEIERIKISSESLGY 384
LAR++Y FGEPG H RMKV R ++G+F SPHFRRP+R L + EIE+++ ++GY
Sbjct: 286 LARLIYGFGEPGSGAHQRMKVARWLMGRFASPHFRRPMRPLVDSEIEKLREGLRAIGY 343 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120201.4168.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120201.4168.1 >prot_M-pyrifera_M_contig120201.4168.1 ID=prot_M-pyrifera_M_contig120201.4168.1|Name=mRNA_M-pyrifera_M_contig120201.4168.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp IDELARVDGIRGVTCNGHTIEIMLLGPADRARVMRIVSVAVGAANAETGRback to top mRNA from alignment at M-pyrifera_M_contig120201:3..419+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120201.4168.1 ID=mRNA_M-pyrifera_M_contig120201.4168.1|Name=mRNA_M-pyrifera_M_contig120201.4168.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=417bp|location=Sequence derived from alignment at M-pyrifera_M_contig120201:3..419+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120201:3..419+ >mRNA_M-pyrifera_M_contig120201.4168.1 ID=mRNA_M-pyrifera_M_contig120201.4168.1|Name=mRNA_M-pyrifera_M_contig120201.4168.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=834bp|location=Sequence derived from alignment at M-pyrifera_M_contig120201:3..419+ (Macrocystis pyrifera P11B4 male)back to top |