prot_M-pyrifera_M_contig120171.4159.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120171.4159.1
Unique Nameprot_M-pyrifera_M_contig120171.4159.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length75
Homology
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BLAST of mRNA_M-pyrifera_M_contig120171.4159.1 vs. uniprot
Match: A0A1E5WH13_9POAL (Uncharacterized protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5WH13_9POAL)

HSP 1 Score: 73.6 bits (179), Expect = 6.830e-15
Identity = 36/80 (45.00%), Postives = 50/80 (62.50%), Query Frame = 0 
Query:    1 RTPDHSKWVGLFQCKQDFIDLVEVGIP-----LASRVAWLLAADGC-EVFYRGAIHGKFIVASPVPQERTPSYSLLFADV 74
            RTPDH+KW+G F  KQDFID+VE+        + + +  L+ +  C +  +RGA+ GK IV  P+P ER P + LLF DV
Sbjct:   65 RTPDHTKWIGSFSSKQDFIDVVELFASSFMKRMFTGIICLIPSISCWQAIFRGAMKGKLIVPCPLPPERIPKFQLLFKDV 144
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BLAST of mRNA_M-pyrifera_M_contig120171.4159.1 vs. uniprot
Match: A0A7N2LHH1_QUELO (Uncharacterized protein n=3 Tax=Quercus lobata TaxID=97700 RepID=A0A7N2LHH1_QUELO)

HSP 1 Score: 70.1 bits (170), Expect = 2.410e-13
Identity = 38/73 (52.05%), Postives = 46/73 (63.01%), Query Frame = 0 
Query:    2 TPDHSKWVGLFQCKQDFIDLVEVGIPLASRVAWLLAADGCEVFYRGAIHGKFIVASPVPQERTPSYSLLFADV 74
            T DH+KWVG F  KQDFID+VEV I    ++    AA      YRGA+ GK IV+ P+P ER P Y LL+ DV
Sbjct:   99 TADHTKWVGAFHKKQDFIDVVEVCIA-PQKLNGFKAA-----IYRGAMKGKLIVSCPLPLERIPKYQLLYKDV 165
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BLAST of mRNA_M-pyrifera_M_contig120171.4159.1 vs. uniprot
Match: UPI0007754C24 (thioredoxin-like protein 4B isoform X2 n=1 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=UPI0007754C24)

HSP 1 Score: 48.5 bits (114), Expect = 3.740e-5
Identity = 20/40 (50.00%), Postives = 26/40 (65.00%), Query Frame = 0 
Query:    2 TPDHSKWVGLFQCKQDFIDLVEVGIPLASRVAWLLAADGC 41
            TPDH+KW+G F  KQDFID+VE G P +S  + +     C
Sbjct:   99 TPDHTKWIGSFSSKQDFIDVVERGYPNSSSFSRMFEQGKC 138
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120171.4159.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A1E5WH13_9POAL6.830e-1545.00Uncharacterized protein n=1 Tax=Dichanthelium olig... [more]
A0A7N2LHH1_QUELO2.410e-1352.05Uncharacterized protein n=3 Tax=Quercus lobata Tax... [more]
UPI0007754C243.740e-550.00thioredoxin-like protein 4B isoform X2 n=1 Tax=Ory... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR12052:SF4THIOREDOXIN-LIKE PROTEIN 4Bcoord: 2..29
IPR004123Dim1 familyPANTHERPTHR12052THIOREDOXIN-LIKE PROTEN 4A, 4Bcoord: 2..29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120171contigM-pyrifera_M_contig120171:206..430 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120171.4159.1mRNA_M-pyrifera_M_contig120171.4159.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120171 206..430 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120171.4159.1 ID=prot_M-pyrifera_M_contig120171.4159.1|Name=mRNA_M-pyrifera_M_contig120171.4159.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
RTPDHSKWVGLFQCKQDFIDLVEVGIPLASRVAWLLAADGCEVFYRGAIH
GKFIVASPVPQERTPSYSLLFADV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004123Dim1