mRNA_M-pyrifera_M_contig12016.4156.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: D8LBA3_ECTSI (FTCD_N domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LBA3_ECTSI) HSP 1 Score: 162 bits (409), Expect = 4.110e-47 Identity = 79/107 (73.83%), Postives = 94/107 (87.85%), Query Frame = 1
Query: 1 DPSRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAIDA 321
D SRG+ TVGCTPLVTNYN+LLSTDD+RLA++VTRSLREKDGGL WVE+LTL+R D T+EAACNLLRPKETT A VL A ++AA +GIRVVD YETGLT+++A+ A
Sbjct: 198 DASRGIATVGCTPLVTNYNILLSTDDKRLASKVTRSLREKDGGLPWVESLTLQRKDGTFEAACNLLRPKETTTANVLAVAEEQAAGVGIRVVDHYETGLTDEEALAA 304
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A7S2UY57_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UY57_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 5.240e-21 Identity = 45/100 (45.00%), Postives = 64/100 (64.00%), Query Frame = 1
Query: 1 DPSRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLT 300
DPS+G + +G V N+NV L T +++LA VTR++RE+DGGL VEA+TL +E ACNLL ++++P MVL A A +GI + + Y GLT
Sbjct: 2 DPSKGAICIGAVAPVLNFNVRLKTTNKKLAASVTRAVRERDGGLEKVEAMTLLHDSGNWEVACNLLDSQKSSPTMVLERATAAAKSVGIDIDNHYVIGLT 101
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A804P0U8_MAIZE (Uncharacterized protein n=14 Tax=Zea mays TaxID=4577 RepID=A0A804P0U8_MAIZE) HSP 1 Score: 78.6 bits (192), Expect = 3.740e-15 Identity = 44/104 (42.31%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 7 SRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAID 318
S GVV VG TP V NYNV L+T D +A R+ R++ E+ GGL V+A+ L GD E ACNLL P V + AA LG+ V Y T L+ ++ ++
Sbjct: 188 SNGVVVVGATPWVDNYNVPLTTADVSVARRIARAVSERGGGLACVQAMGLAHGDGATEVACNLLHPDAVGADQVQERVSRLAAGLGVGVGQGYFTDLSREKVVE 291
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A811SGE6_9POAL (Hypothetical protein n=3 Tax=Andropogoneae TaxID=147429 RepID=A0A811SGE6_9POAL) HSP 1 Score: 74.3 bits (181), Expect = 1.520e-13 Identity = 41/104 (39.42%), Postives = 59/104 (56.73%), Query Frame = 1
Query: 7 SRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAID 318
S+GVV VG T V NYNV + T D A R+ R++ E+ GGL V+A+ L GD E ACNLL P V R+ AA +G+ V + Y T ++++ ++
Sbjct: 194 SKGVVVVGATAWVDNYNVPVRTADVGAARRIARAVSERGGGLASVQAMGLAHGDGAAEVACNLLDPAAVGAEQVQERVRRLAAEMGVGVGEGYFTDFSQEKVVE 297
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A835PU85_VANPL (Uncharacterized protein n=2 Tax=Vanilla planifolia TaxID=51239 RepID=A0A835PU85_VANPL) HSP 1 Score: 73.6 bits (179), Expect = 2.510e-13 Identity = 40/106 (37.74%), Postives = 60/106 (56.60%), Query Frame = 1
Query: 1 DPSRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAID 318
+P+ GVV VG T V NYNV + + +A R+ R + + GGL V+AL L GD E ACNLL P + + + ++ AA+ GIRV Y T +E++ ++
Sbjct: 179 NPANGVVVVGATRWVQNYNVPIWCTNMEVARRIARRVSGRGGGLETVQALALAHGDGWVEVACNLLDPGKVWADQIQSEIQRMAAVEGIRVGQGYFTDFSEEKIVE 284
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A2T7E3P3_9POAL (Uncharacterized protein n=5 Tax=Panicum TaxID=4539 RepID=A0A2T7E3P3_9POAL) HSP 1 Score: 73.6 bits (179), Expect = 3.680e-13 Identity = 39/104 (37.50%), Postives = 60/104 (57.69%), Query Frame = 1
Query: 7 SRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAID 318
S+GVV +G T V NYNV + T D A R+ R++ E+ GGL++V+A+ L G+ E ACNLL P V R+ AA G+ V + Y T ++++ ++
Sbjct: 230 SKGVVAIGATAWVDNYNVPVHTADVAAAKRIARAVSERGGGLKFVQAMGLTHGEGVTEVACNLLDPASVGAEQVQERVRQLAAEQGLTVGEGYFTDFSQERIVE 333
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A7S0FI61_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FI61_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 6.580e-13 Identity = 44/109 (40.37%), Postives = 64/109 (58.72%), Query Frame = 1
Query: 4 PSRGVVTVGCTP-LVTNYNVLLSTD-DRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDD--YETGLTEDQAID 318
P+ G+ TVG P V N+N+ LS+ + +A +T+ LRE+DGG+ VEALTL D +E ACNLL+P T M+ AA + A G + + Y+ G TE Q ++
Sbjct: 204 PNYGIATVGAPPNFVENFNIRLSSRCSKEVAKTLTKKLRERDGGIVGVEALTLPYSGDRFEVACNLLQPSRGTAKMIDDAALEWARANGGESIIEKAYQVGTTEQQCLE 312
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A2I0X392_9ASPA (Uncharacterized protein n=2 Tax=Dendrobium catenatum TaxID=906689 RepID=A0A2I0X392_9ASPA) HSP 1 Score: 72.0 bits (175), Expect = 9.700e-13 Identity = 38/107 (35.51%), Postives = 57/107 (53.27%), Query Frame = 1
Query: 1 DPSRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAIDA 321
DP RGVV +G T V+NYNV + + D ++ + + + GG V+AL L G+D +E ACNLL P V ++ AA G+ V Y T ++D +D+
Sbjct: 185 DPDRGVVVIGATRWVSNYNVPVRSTDINAVRQIAKRVSGRGGGFESVQALALAHGEDCFEVACNLLEPDRVGADRVQLEVQRLAAEEGLVVEQGYYTDFSQDIIVDS 291
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A7N0TJH0_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TJH0_KALFE) HSP 1 Score: 72.0 bits (175), Expect = 9.780e-13 Identity = 39/105 (37.14%), Postives = 59/105 (56.19%), Query Frame = 1
Query: 4 PSRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAID 318
P++GVV +G TP V NYNV + T D +A ++ + + + GGL V+A+ L G++T E ACNLL P + V + AA G+ V Y T E++ I+
Sbjct: 187 PNKGVVVIGATPWVDNYNVPVFTTDLTVARKIAKRVSGRGGGLPKVQAMALTHGENTIEVACNLLEPCKVGGERVQLEVERLAAEEGLAVGKGYYTDFPEEKIIE 291
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Match: A0A0K9P830_ZOSMR (Formimidoyltetrahydrofolate cyclodeaminase, Glutamate formimidoyltransferase n=1 Tax=Zostera marina TaxID=29655 RepID=A0A0K9P830_ZOSMR) HSP 1 Score: 72.0 bits (175), Expect = 1.000e-12 Identity = 39/105 (37.14%), Postives = 58/105 (55.24%), Query Frame = 1
Query: 4 PSRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALTLKRGDDTYEAACNLLRPKETTPAMVLTAARKEAALLGIRVVDDYETGLTEDQAID 318
P++GVV +G T V NYNV L + D +A R+ R + E+ GGL V+A+ L GDD+ E ACNLL+P+ + V A G+ Y T L ++ ++
Sbjct: 188 PAKGVVLIGATSWVDNYNVPLWSTDMTIAKRIARKVSERGGGLPSVQAMALTHGDDSIEVACNLLKPEIVSAHQVQLQIESLATKEGLIAGKGYFTDLPKETIVE 292 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12016.4156.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig12016.4156.1 >prot_M-pyrifera_M_contig12016.4156.1 ID=prot_M-pyrifera_M_contig12016.4156.1|Name=mRNA_M-pyrifera_M_contig12016.4156.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=107bp DPSRGVVTVGCTPLVTNYNVLLSTDDRRLATRVTRSLREKDGGLRWVEALback to top mRNA from alignment at M-pyrifera_M_contig12016:4413..5328+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig12016.4156.1 ID=mRNA_M-pyrifera_M_contig12016.4156.1|Name=mRNA_M-pyrifera_M_contig12016.4156.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=916bp|location=Sequence derived from alignment at M-pyrifera_M_contig12016:4413..5328+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig12016:4413..5328+ >mRNA_M-pyrifera_M_contig12016.4156.1 ID=mRNA_M-pyrifera_M_contig12016.4156.1|Name=mRNA_M-pyrifera_M_contig12016.4156.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig12016:4413..5328+ (Macrocystis pyrifera P11B4 male)back to top |