mRNA_M-pyrifera_M_contig120061.4142.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A3B8J4Q0_9BACT (Conjugal transfer protein (Fragment) n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3B8J4Q0_9BACT) HSP 1 Score: 279 bits (713), Expect = 2.920e-89 Identity = 130/179 (72.63%), Postives = 156/179 (87.15%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDPK 537
+RRVGYDISFHAPKSVSILHALG+D R+L+VFK S+ ATM ++E+ MQTRVR +G +HDR T+EMLW DFVHQTARPV HAPDPHLHCHCF FNVTYD E R KAGQFHD+K+DMP++QARF KRLADG+ LGY +R+T+ FEV AIPQ+AID+FSKRT+LIG++A+E+GITDPK
Sbjct: 79 NRRVGYDISFHAPKSVSILHALGSDDRVLDVFKQSVQATMIEMEQAMQTRVRAKGNNHDRQTSEMLWTDFVHQTARPVAGHAPDPHLHCHCFTFNVTYDALEERYKAGQFHDIKRDMPWYQARFHKRLADGLQGLGYGVRQTRNAFEVVAIPQKAIDWFSKRTDLIGRIAEEQGITDPK 257
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A3C2A710_9BACT (Conjugal transfer protein n=3 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3C2A710_9BACT) HSP 1 Score: 279 bits (713), Expect = 1.100e-85 Identity = 130/179 (72.63%), Postives = 156/179 (87.15%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDPK 537
+RRVGYDISFHAPKSVSILHALG+D R+L+VFK S+ ATM ++E+ MQTRVR +G +HDR T+EMLW DFVHQTARPV HAPDPHLHCHCF FNVTYD E R KAGQFHD+K+DMP++QARF KRLADG+ LGY +R+T+ FEV AIPQ+AID+FSKRT+LIG++A+E+GITDPK
Sbjct: 79 NRRVGYDISFHAPKSVSILHALGSDDRVLDVFKQSVQATMIEMEQAMQTRVRAKGNNHDRQTSEMLWTDFVHQTARPVAGHAPDPHLHCHCFTFNVTYDALEERYKAGQFHDIKRDMPWYQARFHKRLADGLQGLGYGVRQTRNAFEVVAIPQKAIDWFSKRTDLIGRIAEEQGITDPK 257
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A2E5BG54_9FLAO (Conjugal transfer protein n=1 Tax=Pseudozobellia sp. TaxID=2024854 RepID=A0A2E5BG54_9FLAO) HSP 1 Score: 274 bits (700), Expect = 8.470e-84 Identity = 127/179 (70.95%), Postives = 152/179 (84.92%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDPK 537
DRRVGYDISFHAPKSVSILH+L +D ++LE F+ + TM ++E DMQTR+R QGQ DRDT MLW+DF+HQTARPVE H PDPHLHCHCF FNVT+D +E R KAGQFH++K+DMPY+QARFQKRLAD ++++G+ IR+T+ GFEVA +PQ AID FSKRTNLIGQVAKEKGITD K
Sbjct: 79 DRRVGYDISFHAPKSVSILHSLSDDDKVLEAFRSCVHETMNEMELDMQTRIRTQGQYDDRDTASMLWSDFIHQTARPVEGHPPDPHLHCHCFTFNVTHDDKEDRFKAGQFHNIKRDMPYYQARFQKRLADRLAEMGHGIRKTRNGFEVAVVPQAAIDHFSKRTNLIGQVAKEKGITDKK 257
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: UPI0010A67EFD (relaxase domain-containing protein n=1 Tax=Muricauda onchidii TaxID=2562684 RepID=UPI0010A67EFD) HSP 1 Score: 267 bits (683), Expect = 2.630e-81 Identity = 123/177 (69.49%), Postives = 150/177 (84.75%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITD 531
DRRVGYDISFHAPKSVSI+HAL +D +I++ FK S+ TM ++E DMQTR+R QGQ DR T+ +LW DF++QTARPV+ H PDPHLHCHCF FNVTYD+ E R KAGQFH++K+DMPY+QARFQKRLAD +SK+GY IR+T+ GFE+A +PQ+AID F KRTNLIGQVAKEKGI +
Sbjct: 83 DRRVGYDISFHAPKSVSIVHALSDDDKIMQAFKTSVHETMNEMELDMQTRIRSQGQYDDRSTDSLLWTDFIYQTARPVDGHPPDPHLHCHCFTFNVTYDEVENRYKAGQFHNIKRDMPYYQARFQKRLADTLSKMGYGIRKTRSGFELAVVPQKAIDHFCKRTNLIGQVAKEKGIVN 259
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A345H1Z9_9FLAO (Multifunctional conjugation protein TraI n=1 Tax=Kordia sp. SMS9 TaxID=2282170 RepID=A0A345H1Z9_9FLAO) HSP 1 Score: 265 bits (678), Expect = 1.260e-80 Identity = 121/178 (67.98%), Postives = 154/178 (86.52%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDP 534
DRRVGYDISFH PKSVSILHALG+D+R+L+ F+ S+ TM ++E D+QTR+R+ Q+ DR T+E+LW +FVHQTARPV+ HAPDPHLHCHCF FNVTYD+ E + KAGQFH++K+DMPY+QARFQKRLAD +S GY+IR+T+ FEVA +PQ+AI+ FSKRT+LIG++AKEKGIT+P
Sbjct: 79 DRRVGYDISFHCPKSVSILHALGDDERVLKSFETSVHETMLEIEADVQTRIRLNKQNDDRQTSELLWTNFVHQTARPVDGHAPDPHLHCHCFTFNVTYDEVESKFKAGQFHNIKRDMPYYQARFQKRLADKLSNCGYDIRKTRDAFEVAVVPQKAIEHFSKRTDLIGRIAKEKGITNP 256
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: UPI0013D8A4BD (relaxase domain-containing protein n=1 Tax=Cyclobacterium sp. SYSU L10401 TaxID=2678657 RepID=UPI0013D8A4BD) HSP 1 Score: 263 bits (672), Expect = 1.030e-79 Identity = 120/179 (67.04%), Postives = 150/179 (83.80%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDPK 537
+RRVGYDISFH PKSVSILHALG D R+L+ FKDS+ TM ++E D+QTRVR QG+ DRDT E++WADFVH+TARPVE HAPDPHLHCHCF FN TYD +E R KAGQFH++K+DMPY+QARFQKRLAD ++ +GY+IR+ +++A +P+ AID FSKRTN IGQ+AK++ IT+PK
Sbjct: 79 NRRVGYDISFHCPKSVSILHALGTDSRVLDAFKDSVQDTMEEIEVDVQTRVRAQGEYADRDTGELIWADFVHETARPVEGHAPDPHLHCHCFVFNTTYDSQEERFKAGQFHNIKQDMPYYQARFQKRLADRMASMGYDIRKNGNDYDLAMVPKAAIDHFSKRTNHIGQIAKDQNITNPK 257
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A8J2TLG2_9FLAO (AAA domain-containing protein n=2 Tax=Aquaticitalea lipolytica TaxID=1247562 RepID=A0A8J2TLG2_9FLAO) HSP 1 Score: 259 bits (661), Expect = 3.520e-78 Identity = 123/179 (68.72%), Postives = 146/179 (81.56%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDPK 537
DRRVGYDISFH PKSVSILH LG DKR+L+ F+ S+ TM D+++D Q R+RVQ Q DR T E+LWADF+HQTARPV ++APD HLH H F FN TYD+ E + KAGQFH++K+DMPYHQARFQKRLAD +S GY+IR+T+ GFE+A IPQ+AID FSKRTNLIGQVAKEKGI K
Sbjct: 76 DRRVGYDISFHCPKSVSILHGLGTDKRVLKAFEQSVQETMLDIQQDAQARIRVQNQQDDRHTGELLWADFIHQTARPVGNNAPDCHLHAHIFCFNATYDQVEFKFKAGQFHNIKRDMPYHQARFQKRLADKLSSFGYDIRKTKNGFELAMIPQKAIDHFSKRTNLIGQVAKEKGIQSQK 254
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A4Q3SFC3_9BACT (Conjugal transfer protein (Fragment) n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A4Q3SFC3_9BACT) HSP 1 Score: 239 bits (609), Expect = 2.650e-74 Identity = 113/177 (63.84%), Postives = 139/177 (78.53%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITD 531
DR VGYDI+FH PKSVSILH L D+ IL F+ S+ TM+D+E+D +TRVR +G+D +R T E+LW DF HQTARPV++ PDPHLH HCF FN T+D+EE RLKA QF D+K+DMPY+QARFQKRLAD + K GY IR T+ FEV +PQ+ ID FSKRT+ IG+VAKEKGIT+
Sbjct: 75 DRTVGYDINFHCPKSVSILHVLSKDEHILLAFEKSVRETMQDIEQDSKTRVRTRGRDEERATGELLWVDFTHQTARPVDESMPDPHLHAHCFVFNTTWDEEEKRLKACQFRDIKRDMPYYQARFQKRLADNLIKEGYQIRPTKSSFEVVGVPQKVIDLFSKRTDEIGRVAKEKGITN 251
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A3E0QFH6_9BACT (Conjugative relaxase n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3E0QFH6_9BACT) HSP 1 Score: 248 bits (632), Expect = 5.510e-74 Identity = 117/179 (65.36%), Postives = 140/179 (78.21%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDPK 537
+R GYDI+FH PKSVSILHALGND IL+ F S+ TM+ +E D TRVR G+ +RD+ E++WADF+HQTARPVE HAPDPHLHCHCF FNVT+DK E RLKAGQF D+K+DMPY+QA F K +D + LGY IR T+K FEV +PQ+AID FSKRT+ IG+VAKEKGITD K
Sbjct: 75 ERTTGYDINFHCPKSVSILHALGNDSHILDAFHASVQETMQHIEADSNTRVRKGGKYEERDSGELVWADFIHQTARPVEGHAPDPHLHCHCFVFNVTWDKTEDRLKAGQFRDIKRDMPYYQALFHKEFSDRLINLGYQIRPTEKSFEVVGVPQQAIDLFSKRTDEIGRVAKEKGITDAK 253
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Match: A0A2T2YM93_9BACT (Conjugal transfer protein n=4 Tax=Adhaeribacter arboris TaxID=2072846 RepID=A0A2T2YM93_9BACT) HSP 1 Score: 247 bits (631), Expect = 8.320e-74 Identity = 111/179 (62.01%), Postives = 148/179 (82.68%), Query Frame = 1
Query: 1 DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRVRVQGQDHDRDTNEMLWADFVHQTARPVEDHAPDPHLHCHCFAFNVTYDKEEGRLKAGQFHDLKKDMPYHQARFQKRLADGISKLGYNIRRTQKGFEVAAIPQRAIDFFSKRTNLIGQVAKEKGITDPK 537
+R +GYDI+FH PKSVSI+HAL D +L+ F++S+ ATMRD+E+D +TRVR +G+ DR+T E++WA+FVHQTARPV+ PDPHLH HCF FN T+D++E ++KAGQF D+K+DMPY+QARF K+L+D + KLGY +RRT+K FEV +PQ+AID FSKRT+ IG++AKEKGITD K
Sbjct: 75 ERTIGYDINFHCPKSVSIIHALSKDDHLLKAFEESVQATMRDMEQDSKTRVRKEGKYDDRNTGELMWAEFVHQTARPVDGSVPDPHLHAHCFVFNATWDEQEKQIKAGQFRDIKRDMPYYQARFHKQLSDRLIKLGYQVRRTEKSFEVEGVPQKAIDLFSKRTDEIGRIAKEKGITDAK 253 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120061.4142.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig120061.4142.1 >prot_M-pyrifera_M_contig120061.4142.1 ID=prot_M-pyrifera_M_contig120061.4142.1|Name=mRNA_M-pyrifera_M_contig120061.4142.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=179bp DRRVGYDISFHAPKSVSILHALGNDKRILEVFKDSIDATMRDLERDMQTRback to top mRNA from alignment at M-pyrifera_M_contig120061:3..539+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig120061.4142.1 ID=mRNA_M-pyrifera_M_contig120061.4142.1|Name=mRNA_M-pyrifera_M_contig120061.4142.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=537bp|location=Sequence derived from alignment at M-pyrifera_M_contig120061:3..539+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig120061:3..539+ >mRNA_M-pyrifera_M_contig120061.4142.1 ID=mRNA_M-pyrifera_M_contig120061.4142.1|Name=mRNA_M-pyrifera_M_contig120061.4142.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1074bp|location=Sequence derived from alignment at M-pyrifera_M_contig120061:3..539+ (Macrocystis pyrifera P11B4 male)back to top |