prot_M-pyrifera_M_contig120001.4126.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig120001.4126.1
Unique Nameprot_M-pyrifera_M_contig120001.4126.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length154
Homology
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BLAST of mRNA_M-pyrifera_M_contig120001.4126.1 vs. uniprot
Match: F0ZMW4_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZMW4_DICPU)

HSP 1 Score: 53.5 bits (127), Expect = 2.580e-5
Identity = 23/48 (47.92%), Postives = 30/48 (62.50%), Query Frame = 0 
Query:   14 IGERACDETVWVSDRDIKCKVPAGVGLDLTVSVNAGGQLSTPQHRFDY 61
            IG+  C ET+WV  + IKCKVPAG G+ L++ V  GG  S   + F Y
Sbjct: 1736 IGDNLCKETIWVDSKTIKCKVPAGSGIGLSIEVYIGGLKSALNNYFSY 1783
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig120001.4126.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
F0ZMW4_DICPU2.580e-547.92Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013783Immunoglobulin-like foldGENE3D2.60.40.10coord: 1..62
e-value: 5.1E-6
score: 28.3
IPR002909IPT domainPFAMPF01833TIGcoord: 2..61
e-value: 8.2E-7
score: 29.0
IPR014756Immunoglobulin E-setSUPERFAMILY81296E set domainscoord: 2..59

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig120001contigM-pyrifera_M_contig120001:78..539 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig120001.4126.1mRNA_M-pyrifera_M_contig120001.4126.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig120001 78..539 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig120001.4126.1 ID=prot_M-pyrifera_M_contig120001.4126.1|Name=mRNA_M-pyrifera_M_contig120001.4126.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=154bp
LNFGQQDFKPVAFIGERACDETVWVSDRDIKCKVPAGVGLDLTVSVNAGG
QLSTPQHRFDYSGASPPPTVLRVHSLTLLTSFAVPTLASFEPKVVTTRPN
TTLHFTGSDLGPGVGVGAGDQLCGQTVLGGELKSGSCSLDAGVGKDLPIS
VLVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013783Ig-like_fold
IPR002909IPT_dom
IPR014756Ig_E-set