prot_M-pyrifera_M_contig119982.4123.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119982.4123.1
Unique Nameprot_M-pyrifera_M_contig119982.4123.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length163
Homology
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BLAST of mRNA_M-pyrifera_M_contig119982.4123.1 vs. uniprot
Match: A0A1Y2F0B9_PROLT (TPR_MLP1_2 domain-containing protein n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2F0B9_PROLT)

HSP 1 Score: 54.3 bits (129), Expect = 1.730e-5
Identity = 28/59 (47.46%), Postives = 37/59 (62.71%), Query Frame = 0 
Query:    1 LEDDNENWRNRVQSLLNKYERIDPEEYRLLQENAATTSRALEETKAEVQRLTTEWSESV 59
            LE DN+ W+ R QS+L KYERIDP+E R LQ  AA+  +A++    E     TEW E +
Sbjct: 1293 LEADNDRWKQRTQSILEKYERIDPDELRKLQSQAASAEQAIQTLATEAAAKETEWMEKI 1351
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119982.4123.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A1Y2F0B9_PROLT1.730e-547.46TPR_MLP1_2 domain-containing protein n=1 Tax=Proto... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 104..159
NoneNo IPR availableCOILSCoilCoilcoord: 27..54
NoneNo IPR availableCOILSCoilCoilcoord: 76..96

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119982contigM-pyrifera_M_contig119982:28..516 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119982.4123.1mRNA_M-pyrifera_M_contig119982.4123.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119982 28..516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119982.4123.1 ID=prot_M-pyrifera_M_contig119982.4123.1|Name=mRNA_M-pyrifera_M_contig119982.4123.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
LEDDNENWRNRVQSLLNKYERIDPEEYRLLQENAATTSRALEETKAEVQR
LTTEWSESVAARDKFRSALGATVAVKKRQQQELATQTEELAKQTALIASR
DQKVEQLRALAKKKVSDRKELQTKYHELEVTFTMAEKRAKDSEELLQKLT
AELSTAKEETATA
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