prot_M-pyrifera_M_contig119873.4105.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119873.4105.1
Unique Nameprot_M-pyrifera_M_contig119873.4105.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length149
Homology
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: A0A3Q3EDM6_KRYMA (Replication protein A subunit n=2 Tax=Kryptolebias marmoratus TaxID=37003 RepID=A0A3Q3EDM6_KRYMA)

HSP 1 Score: 124 bits (311), Expect = 2.800e-30
Identity = 67/141 (47.52%), Postives = 89/141 (63.12%), Query Frame = 0
Query:    1 DDGKIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            D   I T    F  +E+++ RD    +DVIGV   A D S ITTK G E++KR L + D+TGK V++T WG++ EK   S       +VAVKGAR+ DFGGRSLS    + VMVNP+IPEA  L+AW++ GG A   ++LT
Sbjct:  285 DSEGIPTVQCDFVPIEELENRDKDDIVDVIGVCKSAEDVSRITTKTGREVSKRALNLIDKTGKEVAVTLWGEEAEKFDGSGQP----VVAVKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDHGGYAVDSQSLT 421          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: A0A2I4BXB0_9TELE (Replication protein A subunit n=3 Tax=Austrofundulus limnaeus TaxID=52670 RepID=A0A2I4BXB0_9TELE)

HSP 1 Score: 124 bits (311), Expect = 3.380e-30
Identity = 66/142 (46.48%), Postives = 92/142 (64.79%), Query Frame = 0
Query:    1 DDG-KIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            D+G +I T H  F  +E+++ RD    ID+IGV   A D S +TTK   E++KR L++ D TGK V++T WG++ EK   S       +VA+KGAR+ DFGGRSLS    + VMVNP+IPEA  L+AW++ GG A   ++LT
Sbjct:  342 DEGDEIPTLHCDFVPIEELENRDKDAIIDIIGVCKSAEDVSRVTTKTSREVSKRALSLIDMTGKEVTVTLWGEEAEKFDGSGEP----VVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDQGGYALDSQSLT 479          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: A0A672FTN3_SALFA (Replication protein A subunit n=2 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FTN3_SALFA)

HSP 1 Score: 122 bits (306), Expect = 1.300e-29
Identity = 64/141 (45.39%), Postives = 91/141 (64.54%), Query Frame = 0
Query:    1 DDGKIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            D   + T H  F  + +++ RD    +DVIGV   A+D S ITTK   E++KR L++ D TGK+V++T WG++ EK   S       +VA+KGAR+ DFGGRSLS    + VMVNP+IPEA +L+AW++ GG A   ++LT
Sbjct:  272 DSEGVPTLHCDFVPIAELENRDKDAVLDVIGVCKSADDVSRITTKNSREVSKRALSLIDTTGKAVTVTLWGEEAEKFDGSGEP----VVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFSLRAWYDQGGYALDGQSLT 408          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: A0A672FLV3_SALFA (Replication protein A subunit n=3 Tax=Salarias fasciatus TaxID=181472 RepID=A0A672FLV3_SALFA)

HSP 1 Score: 122 bits (306), Expect = 1.660e-29
Identity = 64/141 (45.39%), Postives = 91/141 (64.54%), Query Frame = 0
Query:    1 DDGKIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            D   + T H  F  + +++ RD    +DVIGV   A+D S ITTK   E++KR L++ D TGK+V++T WG++ EK   S       +VA+KGAR+ DFGGRSLS    + VMVNP+IPEA +L+AW++ GG A   ++LT
Sbjct:  353 DSEGVPTLHCDFVPIAELENRDKDAVLDVIGVCKSADDVSRITTKNSREVSKRALSLIDTTGKAVTVTLWGEEAEKFDGSGEP----VVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFSLRAWYDQGGYALDGQSLT 489          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: UPI0012EE17A6 (replication protein A 70 kDa DNA-binding subunit-like n=1 Tax=Anarrhichthys ocellatus TaxID=433405 RepID=UPI0012EE17A6)

HSP 1 Score: 118 bits (295), Expect = 2.270e-29
Identity = 62/141 (43.97%), Postives = 89/141 (63.12%), Query Frame = 0
Query:    1 DDGKIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            D   I   H  F  + +++ RD    IDVIGV   A+D S ITTK   E++KR L + D TGK V++T WG++ EK   S       +VA+KGAR+ D+GGRSLS +  + V+VNP++PEA +L+AW++ GG A   ++LT
Sbjct:  136 DSQDIPAVHCDFVPIAELENRDKDAVIDVIGVCKSADDVSRITTKNSREVSKRALNLIDTTGKVVTVTVWGEEAEKFDGSRHP----VVAIKGARLSDYGGRSLSASFSSTVLVNPDLPEAFSLRAWYDQGGYAIDSQSLT 272          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: UPI001C4C3AF1 (replication protein A 70 kDa DNA-binding subunit-like isoform X1 n=4 Tax=Thunnus TaxID=8234 RepID=UPI001C4C3AF1)

HSP 1 Score: 121 bits (304), Expect = 3.230e-29
Identity = 65/141 (46.10%), Postives = 87/141 (61.70%), Query Frame = 0
Query:    1 DDGKIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            D   + T H  F  + +++ RDP   IDVIGV   A +A+ ITTK   E+TKR L + D TGK V+ T WG++ EK   S       +VA+KGAR+ DFGGRSLS    + VMVNP+IPEA  L+AW++  G A   ++LT
Sbjct:  378 DTQDVPTLHCDFVPIAELENRDPDSIIDVIGVCKSAEEATRITTKTSREVTKRALNLIDTTGKVVTATLWGEEAEKFDSSGQP----VVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDQKGYALNSQSLT 514          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: A0A671U190_SPAAU (Replication protein A subunit n=1 Tax=Sparus aurata TaxID=8175 RepID=A0A671U190_SPAAU)

HSP 1 Score: 120 bits (301), Expect = 3.820e-29
Identity = 67/142 (47.18%), Postives = 90/142 (63.38%), Query Frame = 0
Query:    1 DDGK-IKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            DDG+ I   H  F  + +++ RD    IDVIGV   A+D S ITTK   E++KR L + D TGK V++T WG++ EK   S       +VAVKGAR+ DFGGRSLS    + VMVNP+IPEA  L+AW++  G A+  ++LT
Sbjct:  226 DDGQGIPAVHCDFVPIAELENRDKDAIIDVIGVCKSADDVSRITTKTSREVSKRALNLIDTTGKEVAVTLWGEEAEKFDASGQP----VVAVKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWFDREGYAANSQSLT 363          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: UPI0011E9BAA3 (replication protein A 70 kDa DNA-binding subunit-like isoform X1 n=4 Tax=Archocentrus centrarchus TaxID=63155 RepID=UPI0011E9BAA3)

HSP 1 Score: 120 bits (301), Expect = 7.790e-29
Identity = 64/141 (45.39%), Postives = 89/141 (63.12%), Query Frame = 0
Query:    1 DDGKIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            D+  I T H  F  + +++ RD    IDVIG+   A D S ITTK   E++KR L++ D TGK V++T WG++ EK   S+      +VA+KGAR+ DFGGRSLS    + VMVNP+IPEA  L+AW++  G A   ++LT
Sbjct:  341 DNQSIPTVHCDFVPIGELENRDKDAIIDVIGICKSAEDVSRITTKNSREVSKRALSLIDTTGKDVTVTLWGEEAEKFDGSTQP----VVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDQEGYALASQSLT 477          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: A0A4W6FMQ3_LATCA (Replication protein A subunit n=4 Tax=Lates calcarifer TaxID=8187 RepID=A0A4W6FMQ3_LATCA)

HSP 1 Score: 119 bits (299), Expect = 1.020e-28
Identity = 68/142 (47.89%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    1 DDGK-IKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            DDG+ I T H  F  + +++ RD    IDVIGV   A D S ITTK   E++KR L + D TGK V++T WG++ EK   S       +VAVKGAR+ DFGGRSLS    + VMVNP+IPEA  L+AW++  G A   ++LT
Sbjct:  235 DDGQDIPTVHCDFVPIAELENRDKDTIIDVIGVCKSAEDVSRITTKSSREVSKRALNLIDTTGKVVTVTLWGEEAEKFDGSGQP----VVAVKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDRTGYALHSQSLT 372          
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Match: UPI001ED7EB70 (replication protein A 70 kDa DNA-binding subunit-like isoform X1 n=2 Tax=Scatophagus argus TaxID=75038 RepID=UPI001ED7EB70)

HSP 1 Score: 120 bits (300), Expect = 1.110e-28
Identity = 66/142 (46.48%), Postives = 88/142 (61.97%), Query Frame = 0
Query:    1 DDGK-IKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSELTKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFGGRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALT 141
            DDG  + T H  F  + +++ RD    IDVIGV     D S ITTK   E++KR L + DRTGK V++T WG++ EK   S       +VA+KGAR+ DFGGRSLS    + VMVNP+IPEA  L+AW++  G A   ++LT
Sbjct:  362 DDGVGVPTVHCDFVPIAELENRDKDAIIDVIGVCKSVEDVSRITTKTSREVSKRALKLIDRTGKEVAVTLWGEEAEKFDGSGQP----VVAIKGARLSDFGGRSLSALFSSTVMVNPDIPEAFRLRAWYDQEGFAQDSQSLT 499          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119873.4105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3Q3EDM6_KRYMA2.800e-3047.52Replication protein A subunit n=2 Tax=Kryptolebias... [more]
A0A2I4BXB0_9TELE3.380e-3046.48Replication protein A subunit n=3 Tax=Austrofundul... [more]
A0A672FTN3_SALFA1.300e-2945.39Replication protein A subunit n=2 Tax=Salarias fas... [more]
A0A672FLV3_SALFA1.660e-2945.39Replication protein A subunit n=3 Tax=Salarias fas... [more]
UPI0012EE17A62.270e-2943.97replication protein A 70 kDa DNA-binding subunit-l... [more]
UPI001C4C3AF13.230e-2946.10replication protein A 70 kDa DNA-binding subunit-l... [more]
A0A671U190_SPAAU3.820e-2947.18Replication protein A subunit n=1 Tax=Sparus aurat... [more]
UPI0011E9BAA37.790e-2945.39replication protein A 70 kDa DNA-binding subunit-l... [more]
A0A4W6FMQ3_LATCA1.020e-2847.89Replication protein A subunit n=4 Tax=Lates calcar... [more]
UPI001ED7EB701.110e-2846.48replication protein A 70 kDa DNA-binding subunit-l... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.40.50.140coord: 4..140
e-value: 2.7E-36
score: 126.2
NoneNo IPR availablePANTHERPTHR23273REPLICATION FACTOR A 1, RFA1coord: 1..136
NoneNo IPR availablePANTHERPTHR23273:SF4REPLICATION PROTEIN A 70 KDA DNA-BINDING SUBUNITcoord: 1..136
IPR031657Replication protein A, OB domainPFAMPF16900REPA_OB_2coord: 16..115
e-value: 9.0E-27
score: 92.9
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 9..132

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119873contigM-pyrifera_M_contig119873:91..537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119873.4105.1mRNA_M-pyrifera_M_contig119873.4105.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119873 91..537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119873.4105.1 ID=prot_M-pyrifera_M_contig119873.4105.1|Name=mRNA_M-pyrifera_M_contig119873.4105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=149bp
DDGKIKTFHFSFTDLEQVQIRDPGQSIDVIGVVAEANDASTITTKKGSEL
TKRDLTIADRTGKSVSLTFWGDQVEKLPPSSSELVGSIVAVKGARIGDFG
GRSLSTNRGADVMVNPEIPEASALKAWWESGGSASGLEALTVRGGGGGS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR031657REPA_OB_2
IPR012340NA-bd_OB-fold