mRNA_M-pyrifera_M_contig101911.409.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig101911.409.1
Unique NamemRNA_M-pyrifera_M_contig101911.409.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A5A8D7X1_CAFRO (Uncharacterized protein n=7 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D7X1_CAFRO)

HSP 1 Score: 229 bits (583), Expect = 1.240e-65
Identity = 120/174 (68.97%), Postives = 141/174 (81.03%), Query Frame = 1 
Query:    1 EEAISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTA 522
            +EA+ +FNAP S KFVFLLSTRAGGLGINLATAD V+LYDSDWNPQ DLQAMDRAHRIGQ KPVRV RFVTE+TVE K++ERAERKL+LDA+VIQ+GRLAE++R L R+E+  MV FGAD VF      S   ++TDDD+DAILARG E+T   RER+K  M HNL +F LD +
Sbjct:  542 DEAMETFNAPGSKKFVFLLSTRAGGLGINLATADVVVLYDSDWNPQADLQAMDRAHRIGQTKPVRVFRFVTESTVEEKIVERAERKLYLDAVVIQQGRLAEQNRALSREELLTMVTFGADEVFQ-----SKGGDVTDDDIDAILARGRERTEEGRERVKSDMQHNLRSFTLDAS 710
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A0P1AYI4_PLAHL (Imitation switch isoform alias nucleosome remodeling factor 140 kDa subunit n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0P1AYI4_PLAHL)

HSP 1 Score: 220 bits (560), Expect = 1.250e-62
Identity = 123/216 (56.94%), Postives = 153/216 (70.83%), Query Frame = 1 
Query:   19 FNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEEL-QDVETTHSAPISLILPPRRSKHIDNSYNID 663
            FN P SSKF FLLSTRAGGLGINLATAD VIL+DSDWNPQ DLQAMDRAHRIGQ K VRV RF+T+ TVE K++ERAERKL+LDA +IQ+GRLA+++R L +DE+  MVRFGAD +F+A   +     +TDDD+DAILARGEE+T   +++I   M HNLA F L       +VS+     GE   +D    H  P + I  P+R +   ++YN D
Sbjct:  500 FNKPGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKTVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQGRLAQQNRKLSKDELMTMVRFGADEIFNARGSM-----ITDDDIDAILARGEERTETMKDKIAADMQHNLANFSLSGDNGNASVSSLYEFEGEVFSKDTNNGHVLPSTFIALPQRERK--SNYNED 708
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A3F2RM01_9STRA (Uncharacterized protein n=5 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RM01_9STRA)

HSP 1 Score: 220 bits (560), Expect = 1.860e-62
Identity = 124/216 (57.41%), Postives = 153/216 (70.83%), Query Frame = 1 
Query:   19 FNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEEL-QDVETTHSAPISLILPPRRSKHIDNSYNID 663
            FN P SSKF FLLSTRAGGLGINLATAD VIL+DSDWNPQ DLQAMDRAHRIGQKK VRV RF+T+ TVE K++ERAERKL+LDA +IQ+GRLA+++R L +DE+  MVRFGAD +F+AG  +     +TDDD+DAILARGEE+T   + +I   M HNLA F L       +VS+     GE   +D       P + I  P+R +   ++YN D
Sbjct:  564 FNEPGSSKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQKKLVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQGRLAQQNRKLSKDELMTMVRFGADEIFNAGGSM-----ITDDDIDAILARGEERTETMKGKIAADMQHNLANFSLSGENGNASVSSLYEFEGEVFSKDTNNGDILPSTFIALPQRERK--SNYNED 772
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A2P4WYG8_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4WYG8_9STRA)

HSP 1 Score: 213 bits (542), Expect = 4.090e-62
Identity = 121/216 (56.02%), Postives = 151/216 (69.91%), Query Frame = 1 
Query:   19 FNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEEL-QDVETTHSAPISLILPPRRSKHIDNSYNID 663
            FN P S+KF FLLSTRAGGLGINLATAD VIL+DSDWNPQ DLQAMDRAHRIGQ K VRV RF+T+ TVE K++ERAERKL+LDA +IQ+GRLA+++R L +DE+  MVRFGAD +F+A   +     +TDDD+DAILARGEE+T   + +I   M HNLA F L       +VS+     GE   +D       P + I  P+R +   ++YN D
Sbjct:   49 FNEPGSTKFCFLLSTRAGGLGINLATADIVILFDSDWNPQVDLQAMDRAHRIGQTKIVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQGRLAQQNRKLSKDELMTMVRFGADEIFNARGSM-----ITDDDIDAILARGEERTEAMKGKIAADMQHNLANFSLSGDNGNASVSSLYEFEGEVFSKDTNNGDILPSTFIALPQRERK--SNYNED 257
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A813CIX4_9DINO (Smarca5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813CIX4_9DINO)

HSP 1 Score: 216 bits (551), Expect = 1.800e-61
Identity = 113/173 (65.32%), Postives = 137/173 (79.19%), Query Frame = 1 
Query:    1 EEAISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDT 519
            +E +  FNAP S  F FLLSTRAGGLGINL TAD VILYDSDWNPQ DLQAMDRAHRIGQKK VRV RF+TENTVE K++ERAERKL+LDA+V+++GRL EK++ L +DE+  MVRFGAD +F      S    LTD+D+DAILARGEE+T+   ++I+R M+HNLA F L +
Sbjct:  503 DEMMDQFNAPDSEFFAFLLSTRAGGLGINLYTADVVILYDSDWNPQMDLQAMDRAHRIGQKKQVRVFRFITENTVEEKIIERAERKLYLDAVVVEQGRLMEKNKTLSKDELMTMVRFGADEIFR-----SKDATLTDEDIDAILARGEEKTKGLSDKIQRDMSHNLANFSLSS 670
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A024TX95_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TX95_9STRA)

HSP 1 Score: 216 bits (549), Expect = 4.460e-61
Identity = 123/223 (55.16%), Postives = 156/223 (69.96%), Query Frame = 1 
Query:    1 EEAISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEELQD--VETTHSAPISLILPPRRSKHIDNSYNID 663
            +E +  FNAP S+KF FLLSTRAGGLGINLATAD VILYDSDWNPQ DLQAMDRAHRIGQ KPVRV RF+T+ TVE K++ERAERKL+LDA +IQ+GRLA+++R L +DE+  MVRFGAD +F+A   +     +TDDD+DAILA+GEE+T   + +I   M HNL  F L +      VS+     GE+     +ET    P + I  P R +    +Y++D
Sbjct:  555 DEYMDVFNAPNSTKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQGRLAQQNRKLSKDELMTMVRFGADEIFNAKGSM-----ITDDDIDAILAKGEERTEGMKAKINEDMQHNLKNFSLSS------VSSLYEFEGEKFAKDALETGGVMPSTFIALPARQRK--TNYDVD 764
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A7S0ITJ3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0ITJ3_9EUKA)

HSP 1 Score: 206 bits (525), Expect = 7.750e-61
Identity = 121/222 (54.50%), Postives = 155/222 (69.82%), Query Frame = 1 
Query:    1 EEAISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEELQDVETTHSA--PISLILPPRRSK--HIDNSY 654
            +EA+  FNAP SSKF+F+LSTRAGGLGINLATADTVILYDSDWNPQ DLQAMDRAHRIGQK+ V V RF+ + +VE K++ERA+RKL+LDA VIQ+GRLAE S+ L ++E+  M+RFGAD V    H      E T++D+DA+LARGEE+T  D  R K S  ++LA F LD  E        ++L+  E QD +   S+  P ++ L  R  K  + +N Y
Sbjct:    3 DEAMHLFNAPGSSKFLFMLSTRAGGLGINLATADTVILYDSDWNPQADLQAMDRAHRIGQKREVMVYRFMIQGSVEEKIIERAQRKLYLDAAVIQQGRLAENSKALSKEEMLSMIRFGADEVLQLDH-----AEATEEDLDALLARGEERTATDNARFK-SQVNSLANFTLDGQE--------KSLYDYEDQDWKQRSSSKGPFAVKLKKRTQKRDYDENEY 210
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A7S0EPM1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0EPM1_9EUKA)

HSP 1 Score: 204 bits (518), Expect = 1.400e-60
Identity = 106/169 (62.72%), Postives = 136/169 (80.47%), Query Frame = 1 
Query:    7 AISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRL 513
            A+ +FNAP S+KF+F+LSTRAGGLGINLATADTVIL+DSDWNPQ DLQAMDRAHRIGQ KPV V RF+ E TVE K++ERA++KL+LDA VIQ+GRLAE S+ L +DE+  M+RFGAD VF +     +  E TD D+D ++ RGEE+TR+D ER +++ +++LA F L
Sbjct:  196 AMETFNAPHSTKFLFMLSTRAGGLGINLATADTVILFDSDWNPQADLQAMDRAHRIGQTKPVVVYRFMAEGTVEEKIIERAQKKLYLDAAVIQQGRLAETSKALSKDEMLSMIRFGADAVFKS----KSADEYTDADIDTLIERGEERTRIDDERFQQT-SNSLANFSL 359
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A397DH02_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397DH02_9STRA)

HSP 1 Score: 214 bits (544), Expect = 2.160e-60
Identity = 123/224 (54.91%), Postives = 157/224 (70.09%), Query Frame = 1 
Query:    1 EEAISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEEL-QDVETTHSA--PISLILPPRRSKHIDNSYNID 663
            +E +  FNAP S+KF FLLSTRAGGLGINLATAD VILYDSDWNPQ DLQAMDRAHRIGQ KPVRV RF+T+ TVE K++ERAERKL+LDA +IQ+GRLA+++R LG+DE+  MVRFGAD +F+A   +     +T+DD+DAILA+GEE+T   + +I   M HNL  F L +      VS+     GE+  +D         P  + LP R+ K    +Y++D
Sbjct:  556 DEYMDVFNAPNSTKFAFLLSTRAGGLGINLATADIVILYDSDWNPQVDLQAMDRAHRIGQTKPVRVFRFITDGTVEEKIVERAERKLYLDAAIIQQGRLAQQNRKLGKDELMTMVRFGADEIFNAKGSM-----ITEDDIDAILAKGEERTEGMKAKINDDMQHNLKNFSLSS------VSSLYEFEGEKFAKDAAEAGGVMPPTFIALPARQRK---TNYDVD 765
[Close]
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Match: A0A553QHR4_9TELE (Uncharacterized protein (Fragment) n=1 Tax=Danionella translucida TaxID=623744 RepID=A0A553QHR4_9TELE)

HSP 1 Score: 206 bits (523), Expect = 2.980e-60
Identity = 117/212 (55.19%), Postives = 149/212 (70.28%), Query Frame = 1 
Query:    4 EAISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQAMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLAEKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQTRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEELQDV-ETTHSAPISLILPPRRSK 636
            +AI +FNA  SSKF+F+LSTRAGGLGINLATAD VILYDSDWNPQ DLQAMDRAHRIGQKKPV+V RF+T+NTVE +++ERAE KL LD+IVIQ+GRL E+   LG+DE+  M+R GA  VF      S   ELTD+D+D IL RG ++T    ER+++    +L  F +DTA P+       +L+  E +D  E    + I  I PP+R +
Sbjct:    1 QAIDAFNALDSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRAHRIGQKKPVKVFRFITDNTVEERIVERAEMKLRLDSIVIQQGRLIEQQNKLGKDEMLQMIRHGATHVF-----ASKDSELTDEDIDTILERGAKKTAEMNERMQKLGESSLRNFSMDTANPE------TSLYNFEGEDYREKQKLSLIEWIEPPKRER 201
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig101911.409.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8D7X1_CAFRO1.240e-6568.97Uncharacterized protein n=7 Tax=Cafeteria roenberg... [more]
A0A0P1AYI4_PLAHL1.250e-6256.94Imitation switch isoform alias nucleosome remodeli... [more]
A0A3F2RM01_9STRA1.860e-6257.41Uncharacterized protein n=5 Tax=Phytophthora kerno... [more]
A0A2P4WYG8_9STRA4.090e-6256.02Uncharacterized protein (Fragment) n=1 Tax=Phytoph... [more]
A0A813CIX4_9DINO1.800e-6165.32Smarca5 protein n=1 Tax=Symbiodinium sp. KB8 TaxID... [more]
A0A024TX95_9STRA4.460e-6155.16Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A7S0ITJ3_9EUKA7.750e-6154.50Hypothetical protein (Fragment) n=1 Tax=Calcidiscu... [more]
A0A7S0EPM1_9EUKA1.400e-6062.72Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]
A0A397DH02_9STRA2.160e-6054.91Uncharacterized protein n=6 Tax=Aphanomyces astaci... [more]
A0A553QHR4_9TELE2.980e-6055.19Uncharacterized protein (Fragment) n=1 Tax=Danione... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig101911contigM-pyrifera_M_contig101911:1..663 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score224.6
Seed ortholog evalue4.7e-56
Seed eggNOG ortholog325452.fgenesh_scip_prom.46568.2667
Preferred nameSMARCA5
KEGG koko:K11654,ko:K11727
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000166,GO:0000182,GO:0000183,GO:0000228,GO:0000733,GO:0000785,GO:0000790,GO:0000793,GO:0000819,GO:0000981,GO:0001067,GO:0001178,GO:0001410,GO:0001650,GO:0003006,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003690,GO:0003697,GO:0003700,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005677,GO:0005694,GO:0005700,GO:0005730,GO:0006139,GO:0006259,GO:0006323,GO:0006325,GO:0006333,GO:0006334,GO:0006336,GO:0006338,GO:0006342,GO:0006348,GO:0006351,GO:0006352,GO:0006353,GO:0006354,GO:0006355,GO:0006357,GO:0006360,GO:0006363,GO:0006366,GO:0006369,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007049,GO:0007059,GO:0007062,GO:0007154,GO:0007165,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007289,GO:0007338,GO:0007399,GO:0007417,GO:0007420,GO:0008094,GO:0008134,GO:0008144,GO:0008150,GO:0008152,GO:0008623,GO:0009058,GO:0009059,GO:0009373,GO:0009553,GO:0009561,GO:0009566,GO:0009653,GO:0009719,GO:0009725,GO:0009755,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010033,GO:0010035,GO:0010038,GO:0010467,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010639,GO:0014070,GO:0015616,GO:0016043,GO:0016070,GO:0016458,GO:0016462,GO:0016584,GO:0016587,GO:0016589,GO:0016590,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017053,GO:0017076,GO:0017111,GO:0018130,GO:0019219,GO:0019222,GO:0019236,GO:0019237,GO:0019438,GO:0019953,GO:0019954,GO:0022008,GO:0022402,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030182,GO:0030435,GO:0030436,GO:0030447,GO:0030518,GO:0030522,GO:0030554,GO:0030575,GO:0030874,GO:0031010,GO:0031055,GO:0031213,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031497,GO:0031974,GO:0031981,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032774,GO:0032870,GO:0032991,GO:0033043,GO:0033044,GO:0033993,GO:0034080,GO:0034097,GO:0034401,GO:0034508,GO:0034622,GO:0034641,GO:0034645,GO:0034654,GO:0034724,GO:0034728,GO:0035039,GO:0035041,GO:0035063,GO:0035075,GO:0035076,GO:0035092,GO:0035639,GO:0035690,GO:0036094,GO:0036310,GO:0036314,GO:0036315,GO:0036436,GO:0036437,GO:0040007,GO:0040026,GO:0040028,GO:0040029,GO:0040034,GO:0042127,GO:0042221,GO:0042493,GO:0042623,GO:0042752,GO:0042766,GO:0043044,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043254,GO:0043401,GO:0043486,GO:0043565,GO:0043933,GO:0043934,GO:0043936,GO:0043954,GO:0044085,GO:0044087,GO:0044212,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044452,GO:0044454,GO:0044464,GO:0044703,GO:0045814,GO:0045815,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0045996,GO:0046019,GO:0046020,GO:0046483,GO:0046688,GO:0048229,GO:0048232,GO:0048468,GO:0048506,GO:0048509,GO:0048510,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048545,GO:0048580,GO:0048582,GO:0048583,GO:0048584,GO:0048609,GO:0048646,GO:0048699,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051129,GO:0051171,GO:0051172,GO:0051173,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051704,GO:0051716,GO:0060194,GO:0060195,GO:0060255,GO:0060260,GO:0060303,GO:0060322,GO:0061062,GO:0061063,GO:0061641,GO:0065003,GO:0065004,GO:0065007,GO:0065008,GO:0070013,GO:0070603,GO:0070615,GO:0070827,GO:0070828,GO:0070829,GO:0070868,GO:0070870,GO:0070887,GO:0070925,GO:0071103,GO:0071241,GO:0071248,GO:0071280,GO:0071310,GO:0071345,GO:0071383,GO:0071390,GO:0071396,GO:0071407,GO:0071444,GO:0071495,GO:0071704,GO:0071824,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0090537,GO:0090568,GO:0097159,GO:0097305,GO:0097306,GO:0097367,GO:0097549,GO:0097617,GO:0097659,GO:0098813,GO:0140097,GO:0140110,GO:1900034,GO:1900036,GO:1900049,GO:1900050,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901654,GO:1901655,GO:1901700,GO:1901701,GO:1902275,GO:1902494,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904949,GO:1905268,GO:1990823,GO:1990830,GO:1990837,GO:2000026,GO:2000112,GO:2000113,GO:2000142,GO:2000177,GO:2001141,GO:2001251
EggNOG free text desc.SLIDE
EggNOG OGs3Q947@4776,COG0553@1,KOG0385@2759
COG Functional cat.K
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03021,ko03036
Exons1
Model size663
Cds size663
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815519.3805788-CDS-M-pyrifera_M_contig101911:0..6631622815519.3805788-CDS-M-pyrifera_M_contig101911:0..663Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101911 1..663 +
1692277447.137833-CDS-M-pyrifera_M_contig101911:0..6631692277447.137833-CDS-M-pyrifera_M_contig101911:0..663Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig101911 1..663 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig101911.409.1prot_M-pyrifera_M_contig101911.409.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig101911 1..663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig101911.409.1

>prot_M-pyrifera_M_contig101911.409.1 ID=prot_M-pyrifera_M_contig101911.409.1|Name=mRNA_M-pyrifera_M_contig101911.409.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
EEAISSFNAPKSSKFVFLLSTRAGGLGINLATADTVILYDSDWNPQQDLQ
AMDRAHRIGQKKPVRVLRFVTENTVEVKVLERAERKLFLDAIVIQEGRLA
EKSRGLGRDEVAHMVRFGADLVFDAGHDVSATKELTDDDVDAILARGEEQ
TRLDRERIKRSMAHNLATFRLDTAEPQGAVSASRALWGEELQDVETTHSA
PISLILPPRRSKHIDNSYNID
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mRNA from alignment at M-pyrifera_M_contig101911:1..663+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig101911.409.1 ID=mRNA_M-pyrifera_M_contig101911.409.1|Name=mRNA_M-pyrifera_M_contig101911.409.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=663bp|location=Sequence derived from alignment at M-pyrifera_M_contig101911:1..663+ (Macrocystis pyrifera P11B4 male)
GAGGAAGCTATTTCATCCTTCAACGCACCAAAAAGTAGCAAGTTTGTCTT
TCTCTTGTCAACAAGAGCTGGTGGTCTTGGGATCAACCTCGCAACTGCAG
ATACGGTGATTTTGTATGACAGCGATTGGAATCCGCAACAAGATCTGCAA
GCCATGGATCGTGCACATCGCATTGGCCAGAAGAAACCTGTTCGAGTATT
GCGTTTTGTCACAGAGAATACTGTAGAAGTCAAAGTACTAGAACGTGCAG
AACGAAAGTTGTTCTTGGATGCCATCGTGATCCAGGAAGGGCGACTTGCG
GAAAAGTCACGTGGGTTGGGACGAGATGAGGTTGCACACATGGTTCGTTT
CGGTGCAGATCTTGTGTTTGATGCTGGTCATGATGTCTCCGCGACGAAAG
AGTTAACAGATGATGATGTGGATGCTATTCTTGCCCGAGGGGAAGAACAA
ACACGACTTGATCGTGAACGAATCAAACGCTCCATGGCGCACAATCTTGC
AACATTTCGTCTTGACACTGCAGAGCCACAAGGTGCAGTGTCAGCTTCTC
GTGCATTGTGGGGTGAAGAGTTGCAGGATGTAGAAACAACACACTCTGCT
CCCATCTCTCTTATCCTTCCACCACGGCGTTCCAAGCACATTGACAATTC
TTACAACATTGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig101911:1..663+

>mRNA_M-pyrifera_M_contig101911.409.1 ID=mRNA_M-pyrifera_M_contig101911.409.1|Name=mRNA_M-pyrifera_M_contig101911.409.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1326bp|location=Sequence derived from alignment at M-pyrifera_M_contig101911:1..663+ (Macrocystis pyrifera P11B4 male)
GAGGAAGCTATTTCATCCTTCAACGCACCAAAAAGTAGCAAGTTTGTCTT
TCTCTTGTCAACAAGAGCTGGTGGTCTTGGGATCAACCTCGCAACTGCAG
ATACGGTGATTTTGTATGACAGCGATTGGAATCCGCAACAAGATCTGCAA
GCCATGGATCGTGCACATCGCATTGGCCAGAAGAAACCTGTTCGAGTATT
GCGTTTTGTCACAGAGAATACTGTAGAAGTCAAAGTACTAGAACGTGCAG
AACGAAAGTTGTTCTTGGATGCCATCGTGATCCAGGAAGGGCGACTTGCG
GAAAAGTCACGTGGGTTGGGACGAGATGAGGTTGCACACATGGTTCGTTT
CGGTGCAGATCTTGTGTTTGATGCTGGTCATGATGTCTCCGCGACGAAAG
AGTTAACAGATGATGATGTGGATGCTATTCTTGCCCGAGGGGAAGAACAA
ACACGACTTGATCGTGAACGAATCAAACGCTCCATGGCGCACAATCTTGC
AACATTTCGTCTTGACACTGCAGAGCCACAAGGTGCAGTGTCAGCTTCTC
GTGCATTGTGGGGTGAAGAGTTGCAGGATGTAGAAACAACACACTCTGCT
CCCATCTCTCTTATCCTTCCACCACGGCGTTCCAAGCACATTGACAATTC
TTACAACATTGATGAGGAAGCTATTTCATCCTTCAACGCACCAAAAAGTA
GCAAGTTTGTCTTTCTCTTGTCAACAAGAGCTGGTGGTCTTGGGATCAAC
CTCGCAACTGCAGATACGGTGATTTTGTATGACAGCGATTGGAATCCGCA
ACAAGATCTGCAAGCCATGGATCGTGCACATCGCATTGGCCAGAAGAAAC
CTGTTCGAGTATTGCGTTTTGTCACAGAGAATACTGTAGAAGTCAAAGTA
CTAGAACGTGCAGAACGAAAGTTGTTCTTGGATGCCATCGTGATCCAGGA
AGGGCGACTTGCGGAAAAGTCACGTGGGTTGGGACGAGATGAGGTTGCAC
ACATGGTTCGTTTCGGTGCAGATCTTGTGTTTGATGCTGGTCATGATGTC
TCCGCGACGAAAGAGTTAACAGATGATGATGTGGATGCTATTCTTGCCCG
AGGGGAAGAACAAACACGACTTGATCGTGAACGAATCAAACGCTCCATGG
CGCACAATCTTGCAACATTTCGTCTTGACACTGCAGAGCCACAAGGTGCA
GTGTCAGCTTCTCGTGCATTGTGGGGTGAAGAGTTGCAGGATGTAGAAAC
AACACACTCTGCTCCCATCTCTCTTATCCTTCCACCACGGCGTTCCAAGC
ACATTGACAATTCTTACAACATTGAT
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