prot_M-pyrifera_M_contig11984.4088.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11984.4088.1
Unique Nameprot_M-pyrifera_M_contig11984.4088.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length187
Homology
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A6G6D7G8_ECTSI (Photosystem I assembly protein Ycf4 n=32 Tax=Phaeophyceae TaxID=2870 RepID=A0A6G6D7G8_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 2.530e-121
Identity = 172/180 (95.56%), Postives = 179/180 (99.44%), Query Frame = 0
Query:    7 NNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            NNLLKRDIVVGSRRFSN+FWTFILFFGGLGFLLTGISSYFQKNLLFFINSTEL+FLPQGLVMTFYGVV ISLSIYIGLT+FWDVGSGYNEFDKQNEL+RIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKR+IYLCTKD+REIPLTPVEQPRSLE+LENEASELARFLNINLEGL
Sbjct:    3 NNLLKRDIVVGSRRFSNFFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELSFLPQGLVMTFYGVVGISLSIYIGLTIFWDVGSGYNEFDKQNELIRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRIIYLCTKDQREIPLTPVEQPRSLEVLENEASELARFLNINLEGL 182          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A8F0F7W7_AKKLU (Photosystem I assembly protein Ycf4 n=1 Tax=Akkesiphycus lubricus TaxID=3022 RepID=A0A8F0F7W7_AKKLU)

HSP 1 Score: 337 bits (865), Expect = 1.090e-116
Identity = 165/186 (88.71%), Postives = 178/186 (95.70%), Query Frame = 0
Query:    1 MSTEKINNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            M+ ++IN  +KRD+VVGSRRFSNYFW  +LFFGG GFLLTGISSYFQKNLLFFINSTEL+FLPQGLVMTFYGVVAISLSIYI LT+FWD+GSGYNEFDK++EL+RIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKD+REIPLTPVEQPRSLE LENEASELARFLNINLEGL
Sbjct:    1 MNNDQINPFIKRDVVVGSRRFSNYFWALVLFFGGAGFLLTGISSYFQKNLLFFINSTELSFLPQGLVMTFYGVVAISLSIYIALTIFWDIGSGYNEFDKRDELIRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDQREIPLTPVEQPRSLETLENEASELARFLNINLEGL 186          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A344PFE2_9PHAE (Photosystem I assembly protein Ycf4 n=4 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A344PFE2_9PHAE)

HSP 1 Score: 331 bits (848), Expect = 3.700e-114
Identity = 162/180 (90.00%), Postives = 173/180 (96.11%), Query Frame = 0
Query:    7 NNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            +NLLKRDIVVGSRRFSN+FW FILFFGGLGF LTG+ SYF+KN LFFINS +LAFLPQGL+MTFYGVVAISLSIYI LTVFWDVGSGYNEFDKQNEL+RIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKR+IYLCTKD+REIPLT VEQPRSLE+LENEASELARFLNINLEG+
Sbjct:    3 DNLLKRDIVVGSRRFSNFFWAFILFFGGLGFFLTGVLSYFKKNFLFFINSNDLAFLPQGLIMTFYGVVAISLSIYISLTVFWDVGSGYNEFDKQNELIRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRIIYLCTKDQREIPLTAVEQPRSLEVLENEASELARFLNINLEGV 182          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A1L2F1V9_9PHAE (Photosystem I assembly protein Ycf4 n=13 Tax=Sargassaceae TaxID=3014 RepID=A0A1L2F1V9_9PHAE)

HSP 1 Score: 328 bits (842), Expect = 3.490e-113
Identity = 160/186 (86.02%), Postives = 175/186 (94.09%), Query Frame = 0
Query:    1 MSTEKINNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            MS E I +LLKRDIVVGSRRFSNYFWT ILF GGLGFL+ GISSYFQKNLL FINS +L+FLPQG++MTFYGV+AI LS YIGLT+FWDVGSGYNEFDK+NELVRIVRRGFPGKNR+ILLVY F+N+KSIKLNIQDG+NPKR+IYLCTKD+REIPLTPVEQPRSLEILENEASELARFLNINLEGL
Sbjct:    1 MSVEDIGSLLKRDIVVGSRRFSNYFWTIILFLGGLGFLIAGISSYFQKNLLGFINSEQLSFLPQGVIMTFYGVIAIGLSFYIGLTIFWDVGSGYNEFDKENELVRIVRRGFPGKNRKILLVYQFRNLKSIKLNIQDGLNPKRIIYLCTKDQREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A8F0F7K4_9PHAE (Photosystem I assembly protein Ycf4 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0F7K4_9PHAE)

HSP 1 Score: 321 bits (822), Expect = 3.770e-110
Identity = 158/182 (86.81%), Postives = 170/182 (93.41%), Query Frame = 0
Query:    5 KINNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            K N L+KRDIV+GSRR SNYFWT ILF GGL FL+TGISSYFQ+N L FINS EL+FLPQGLVMTFYGVVA+SLSIYIGLT+FWD+GSGYNEFDKQ ELVRIVR+GFPGKNRQILLVY+F NIKSIKLNIQDGINPKRVIYLCTKD+REIPLTPVEQPRSLE+LENEAS LARFLNINLEGL
Sbjct:    4 KSNELIKRDIVIGSRRISNYFWTVILFIGGLAFLITGISSYFQRNFLPFINSFELSFLPQGLVMTFYGVVALSLSIYIGLTIFWDIGSGYNEFDKQTELVRIVRKGFPGKNRQILLVYSFNNIKSIKLNIQDGINPKRVIYLCTKDQREIPLTPVEQPRSLELLENEASNLARFLNINLEGL 185          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: Q2PQH1_FUCVE (Photosystem I assembly protein Ycf4 n=3 Tax=Fucaceae TaxID=3010 RepID=Q2PQH1_FUCVE)

HSP 1 Score: 318 bits (816), Expect = 3.210e-109
Identity = 153/186 (82.26%), Postives = 172/186 (92.47%), Query Frame = 0
Query:    1 MSTEKINNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            M +E I+NLLKRDI++GSRRFSNYFWT ILFFGGLGFL+ GISSY Q N+LFFI+S EL FLPQGL+MTFYGV+AISLS+YI LT+FWDVGSGYNEFDK+N+LVRIVR GFPGKNR+ILLVY FKN+KSIKL IQDGINPKR+IYLCTKD+REIPLTPVEQPR LE LEN+ASELA+FLNINLEGL
Sbjct:    1 MISENIDNLLKRDIIIGSRRFSNYFWTIILFFGGLGFLIAGISSYLQNNILFFIDSKELTFLPQGLIMTFYGVIAISLSLYISLTIFWDVGSGYNEFDKENQLVRIVRLGFPGKNRKILLVYQFKNLKSIKLTIQDGINPKRIIYLCTKDQREIPLTPVEQPRPLESLENDASELAKFLNINLEGL 186          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A8E6D5U2_9PHAE (Photosystem I assembly protein Ycf4 n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E6D5U2_9PHAE)

HSP 1 Score: 310 bits (794), Expect = 7.480e-106
Identity = 155/187 (82.89%), Postives = 167/187 (89.30%), Query Frame = 0
Query:    1 MSTEKI-NNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            M+  KI NNLLKRDI++GSRRFSNYFW FIL  GGLGFLL G+SSYF+KN L F NS EL F+PQGLVMTFYGVVAISLSIYI LT+ WDVG GYNEFDK  EL+RIVRRGFPGKNRQILLVY+F+NIKSIKLNIQDGINPKR+IYLCTKDKREIPLTPVEQPR L ILE EASELA+FLNINLEGL
Sbjct:    1 MNMSKITNNLLKRDIIIGSRRFSNYFWAFILLLGGLGFLLAGVSSYFKKNFLPFGNSIELNFVPQGLVMTFYGVVAISLSIYIALTILWDVGGGYNEFDKDKELIRIVRRGFPGKNRQILLVYSFQNIKSIKLNIQDGINPKRIIYLCTKDKREIPLTPVEQPRPLNILETEASELAKFLNINLEGL 187          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A6B7IL95_9PHAE (Photosystem I assembly protein Ycf4 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7IL95_9PHAE)

HSP 1 Score: 309 bits (792), Expect = 1.270e-103
Identity = 150/163 (92.02%), Postives = 160/163 (98.16%), Query Frame = 0
Query:    7 NNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILE 169
            +NLLKRDIVVGSRRFSN+FWTF+LFFGGLGFLL GISSYFQKNL+FFINS ELAFLPQGLVMTFYGVVAISLS+YIGLT+FWDVGSGYNEFDKQNEL+RIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKR+IYLCTKD+REIPLTP EQPRSLE+LE
Sbjct:    3 DNLLKRDIVVGSRRFSNFFWTFVLFFGGLGFLLAGISSYFQKNLIFFINSMELAFLPQGLVMTFYGVVAISLSLYIGLTIFWDVGSGYNEFDKQNELIRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRIIYLCTKDQREIPLTPFEQPRSLEVLE 165          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: A0A2I4Q2G9_9PHAE (Photosystem I assembly protein Ycf4 n=1 Tax=Dictyopteris divaricata TaxID=156996 RepID=A0A2I4Q2G9_9PHAE)

HSP 1 Score: 297 bits (760), Expect = 1.130e-100
Identity = 138/179 (77.09%), Postives = 165/179 (92.18%), Query Frame = 0
Query:    8 NLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            +++KRDI++GSRRFSN FW  ILF GG+GFLLTGIS+Y+QKN L F+N+ +L+FLPQGL+MTFYG++ +SLS++I LT+FWDVGSGYNEF+KQ EL+RIVRRGFPGKNR+ILLVY F NIKSIKLNIQ+GINPKR+IYLCTKD+REIPLTPVEQPRSL++LENEAS LARFLNI LEGL
Sbjct:    9 HIIKRDIIIGSRRFSNLFWAIILFLGGVGFLLTGISTYYQKNFLPFVNTADLSFLPQGLIMTFYGIIGLSLSLFISLTIFWDVGSGYNEFNKQTELIRIVRRGFPGKNRKILLVYPFNNIKSIKLNIQEGINPKRIIYLCTKDEREIPLTPVEQPRSLKLLENEASNLARFLNIKLEGL 187          
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Match: B7T212_VAULI (Photosystem I assembly protein Ycf4 n=1 Tax=Vaucheria litorea TaxID=109269 RepID=B7T212_VAULI)

HSP 1 Score: 277 bits (708), Expect = 8.810e-93
Identity = 135/182 (74.18%), Postives = 157/182 (86.26%), Query Frame = 0
Query:    5 KINNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNLLFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQNELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKDKREIPLTPVEQPRSLEILENEASELARFLNINLEGL 186
            KI NL++RDI++GSRRFSNYFW  IL  GGLGFLL G SSY + NLL+F N TEL F+PQG+VMTFYGVVAISLS YI LT+ WDVG+GYNEF+K +ELVRI+R+GFPGKNRQILLVY F NIKSIKL IQDGINPKR+++LCTKD+R+IPL  VEQPRSL  LE +ASELA+FL +NLEGL
Sbjct:    4 KIKNLIRRDIILGSRRFSNYFWALILAIGGLGFLLAGFSSYSKINLLYFANPTELIFIPQGIVMTFYGVVAISLSFYITLTIIWDVGAGYNEFNKVDELVRIMRKGFPGKNRQILLVYPFNNIKSIKLTIQDGINPKRLLFLCTKDQRQIPLNQVEQPRSLLELETQASELAKFLEVNLEGL 185          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11984.4088.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6D7G8_ECTSI2.530e-12195.56Photosystem I assembly protein Ycf4 n=32 Tax=Phaeo... [more]
A0A8F0F7W7_AKKLU1.090e-11688.71Photosystem I assembly protein Ycf4 n=1 Tax=Akkesi... [more]
A0A344PFE2_9PHAE3.700e-11490.00Photosystem I assembly protein Ycf4 n=4 Tax=Scytos... [more]
A0A1L2F1V9_9PHAE3.490e-11386.02Photosystem I assembly protein Ycf4 n=13 Tax=Sarga... [more]
A0A8F0F7K4_9PHAE3.770e-11086.81Photosystem I assembly protein Ycf4 n=1 Tax=Protoh... [more]
Q2PQH1_FUCVE3.210e-10982.26Photosystem I assembly protein Ycf4 n=3 Tax=Fucace... [more]
A0A8E6D5U2_9PHAE7.480e-10682.89Photosystem I assembly protein Ycf4 n=1 Tax=Ishige... [more]
A0A6B7IL95_9PHAE1.270e-10392.02Photosystem I assembly protein Ycf4 n=1 Tax=Clados... [more]
A0A2I4Q2G9_9PHAE1.130e-10077.09Photosystem I assembly protein Ycf4 n=1 Tax=Dictyo... [more]
B7T212_VAULI8.810e-9374.18Photosystem I assembly protein Ycf4 n=1 Tax=Vauche... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003359Photosystem I Ycf4, assemblyPFAMPF02392Ycf4coord: 10..185
e-value: 1.9E-79
score: 265.4
IPR003359Photosystem I Ycf4, assemblyHAMAPMF_00437Ycf4coord: 1..186
score: 38.808
NoneNo IPR availablePANTHERPTHR33288FAMILY NOT NAMEDcoord: 13..185
NoneNo IPR availablePANTHERPTHR33288:SF4PHOTOSYSTEM I ASSEMBLY PROTEIN YCF4coord: 13..185
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 47..65
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 66..90
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..46
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..186
NoneNo IPR availablePRODOMPD003698coord: 10..183
e-value: 2.0E-55
score: 544.0
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 21..43

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11984contigM-pyrifera_M_contig11984:7810..8370 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11984.4088.1mRNA_M-pyrifera_M_contig11984.4088.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11984 7810..8370 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11984.4088.1 ID=prot_M-pyrifera_M_contig11984.4088.1|Name=mRNA_M-pyrifera_M_contig11984.4088.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=187bp
MSTEKINNLLKRDIVVGSRRFSNYFWTFILFFGGLGFLLTGISSYFQKNL
LFFINSTELAFLPQGLVMTFYGVVAISLSIYIGLTVFWDVGSGYNEFDKQ
NELVRIVRRGFPGKNRQILLVYAFKNIKSIKLNIQDGINPKRVIYLCTKD
KREIPLTPVEQPRSLEILENEASELARFLNINLEGL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003359PSI_Ycf4_assembly