prot_M-pyrifera_M_contig11984.4085.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig11984.4085.1
Unique Nameprot_M-pyrifera_M_contig11984.4085.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A2I4Q2H4_9PHAE (Photosystem II protein Y n=27 Tax=Phaeophyceae TaxID=2870 RepID=A0A2I4Q2H4_9PHAE)

HSP 1 Score: 71.2 bits (173), Expect = 8.760e-16
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR 37
            MD+RLIFVF PVLAAASWALYNIGRVALQQFNK+ASR
Sbjct:    1 MDVRLIFVFFPVLAAASWALYNIGRVALQQFNKLASR 37          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A7T8G5H1_SCYLO (Photosystem II protein Y n=5 Tax=Scytosiphonaceae TaxID=2891 RepID=A0A7T8G5H1_SCYLO)

HSP 1 Score: 70.9 bits (172), Expect = 1.820e-15
Identity = 34/37 (91.89%), Postives = 36/37 (97.30%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR 37
            MD+RL+FVF PVLAAASWALYNIGRVALQQFNKIASR
Sbjct:   19 MDLRLLFVFFPVLAAASWALYNIGRVALQQFNKIASR 55          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A1I9LW23_9PHAE (Photosystem II protein Y n=2 Tax=Ectocarpales TaxID=2877 RepID=A0A1I9LW23_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.460e-14
Identity = 32/37 (86.49%), Postives = 35/37 (94.59%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR 37
            MD+RL+FVF PVLAAASWALYNIGRVALQQ+NKI SR
Sbjct:    1 MDLRLLFVFFPVLAAASWALYNIGRVALQQYNKIVSR 37          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A8E5XRH9_9PHAE (Photosystem II protein Y n=1 Tax=Ishige okamurae TaxID=233772 RepID=A0A8E5XRH9_9PHAE)

HSP 1 Score: 68.2 bits (165), Expect = 1.460e-14
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR 37
            MD RL+FVF PVLAA SWALYNIGRVALQQFNKIASR
Sbjct:    1 MDARLLFVFLPVLAAGSWALYNIGRVALQQFNKIASR 37          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A8F0F7Q4_9PHAE (Photosystem II protein Y n=2 Tax=Laminariales TaxID=2886 RepID=A0A8F0F7Q4_9PHAE)

HSP 1 Score: 67.8 bits (164), Expect = 2.080e-14
Identity = 33/37 (89.19%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR 37
            MDIRL+ V SPV AAASWALYNIGRVALQQFNKIASR
Sbjct:    1 MDIRLLLVLSPVFAAASWALYNIGRVALQQFNKIASR 37          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A8F0FAT3_9PHAE (Photosystem II protein Y n=1 Tax=Desmarestia aculeata TaxID=62298 RepID=A0A8F0FAT3_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.430e-13
Identity = 32/37 (86.49%), Postives = 34/37 (91.89%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR 37
            MD RLIFVF PVLAAASWA+YNIGRVALQQ+ KIASR
Sbjct:    1 MDGRLIFVFFPVLAAASWAIYNIGRVALQQYKKIASR 37          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A6B7EVZ8_9PHAE (Photosystem II protein Y n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A6B7EVZ8_9PHAE)

HSP 1 Score: 65.1 bits (157), Expect = 2.430e-13
Identity = 31/36 (86.11%), Postives = 34/36 (94.44%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIAS 36
            MDIRL+FVF PVLAAASWALYNIGRVALQQ+ KIA+
Sbjct:    1 MDIRLLFVFFPVLAAASWALYNIGRVALQQYKKIAN 36          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A8F0JXI6_9PHAE (Photosystem II protein Y n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0JXI6_9PHAE)

HSP 1 Score: 62.8 bits (151), Expect = 2.010e-12
Identity = 29/36 (80.56%), Postives = 33/36 (91.67%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIAS 36
            MD+RL+ VF PV+ AA+WALYNIGRVALQQFNKIAS
Sbjct:    1 MDLRLLLVFFPVVTAATWALYNIGRVALQQFNKIAS 36          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: A0A514CPN0_9STRA (Photosystem II protein Y n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A514CPN0_9STRA)

HSP 1 Score: 58.9 bits (141), Expect = 7.140e-11
Identity = 26/37 (70.27%), Postives = 32/37 (86.49%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR 37
            MD R++FVF+P+L AASWALYNIGRVALQQ  +I S+
Sbjct:    1 MDFRIVFVFAPILVAASWALYNIGRVALQQLARIRSQ 37          
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Match: W0S1X5_PORPP (Photosystem II protein Y n=2 Tax=Porphyridium TaxID=2791 RepID=W0S1X5_PORPP)

HSP 1 Score: 57.4 bits (137), Expect = 2.710e-10
Identity = 27/36 (75.00%), Postives = 30/36 (83.33%), Query Frame = 0
Query:    1 MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIAS 36
            MD RL+ V  PVLAAASWALYNIGRVALQQF ++ S
Sbjct:    1 MDTRLLIVLLPVLAAASWALYNIGRVALQQFKRLGS 36          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11984.4085.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2I4Q2H4_9PHAE8.760e-1691.89Photosystem II protein Y n=27 Tax=Phaeophyceae Tax... [more]
A0A7T8G5H1_SCYLO1.820e-1591.89Photosystem II protein Y n=5 Tax=Scytosiphonaceae ... [more]
A0A1I9LW23_9PHAE1.460e-1486.49Photosystem II protein Y n=2 Tax=Ectocarpales TaxI... [more]
A0A8E5XRH9_9PHAE1.460e-1489.19Photosystem II protein Y n=1 Tax=Ishige okamurae T... [more]
A0A8F0F7Q4_9PHAE2.080e-1489.19Photosystem II protein Y n=2 Tax=Laminariales TaxI... [more]
A0A8F0FAT3_9PHAE2.430e-1386.49Photosystem II protein Y n=1 Tax=Desmarestia acule... [more]
A0A6B7EVZ8_9PHAE2.430e-1386.11Photosystem II protein Y n=1 Tax=Cladosiphon okamu... [more]
A0A8F0JXI6_9PHAE2.010e-1280.56Photosystem II protein Y n=1 Tax=Protohalopteris s... [more]
A0A514CPN0_9STRA7.140e-1170.27Photosystem II protein Y n=1 Tax=Dictyocha speculu... [more]
W0S1X5_PORPP2.710e-1075.00Photosystem II protein Y n=2 Tax=Porphyridium TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009388Photosystem II PsbYPFAMPF06298PsbYcoord: 1..34
e-value: 8.8E-17
score: 60.7
IPR009388Photosystem II PsbYHAMAPMF_00717PSII_PsbYcoord: 2..36
score: 14.746
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 5..15
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..37
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..4
NoneNo IPR availablePRODOMPD968187coord: 3..33
e-value: 0.003
score: 90.0
NoneNo IPR availableTMHMMTMhelixcoord: 5..24

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig11984contigM-pyrifera_M_contig11984:5529..5642 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig11984.4085.1mRNA_M-pyrifera_M_contig11984.4085.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig11984 5529..5642 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig11984.4085.1 ID=prot_M-pyrifera_M_contig11984.4085.1|Name=mRNA_M-pyrifera_M_contig11984.4085.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
MDIRLIFVFSPVLAAASWALYNIGRVALQQFNKIASR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009388PSII_PsbY