prot_M-pyrifera_M_contig119839.4083.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119839.4083.1
Unique Nameprot_M-pyrifera_M_contig119839.4083.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A7C1CMU1_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1CMU1_9BACT)

HSP 1 Score: 251 bits (642), Expect = 1.200e-79
Identity = 132/186 (70.97%), Postives = 148/186 (79.57%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATD-AWKSALTGLDI-----TWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C  HGALY+LPI IVTF VGG IEVLFA+I KHEVNEGF VTG L PLILPPTIPLWQVAL   FGVIIGKE FGGTGMNIFNPAL ARAFL+FAYPAQ SG+ VW  V A   VDGFSGAT L  VA + DPGA+D A+++A+T ++I     TWLDAFLG +PGS+GETS LACL+GA +LI T
Sbjct:  113 CFAHGALYFLPIFIVTFAVGGGIEVLFAMINKHEVNEGFFVTGFLIPLILPPTIPLWQVALATAFGVIIGKEAFGGTGMNIFNPALVARAFLYFAYPAQNSGEDVWVPVAAEKAVDGFSGATLLARVAEI-DPGASDKAYQAAVTAMEINGRAATWLDAFLGSIPGSIGETSTLACLLGAALLIFT 297          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A3M2C2N3_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3M2C2N3_9BACT)

HSP 1 Score: 248 bits (634), Expect = 1.370e-78
Identity = 128/182 (70.33%), Postives = 147/182 (80.77%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATAL--GAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C+ HGALYYLP+L+VTF+VGG+ E LFA++R+HE+NEGFLVTGMLFPL+LPPTIPLWQVALGI FGV++GKEIFGGTGMN+ NPALTARAFLFFAYPA+ISGDKVW  + A    DG+SGATAL  GAV G+     T    S        W DAFLG VPGSMGETSVLACLIGA IL++T
Sbjct:  114 CIVHGALYYLPVLLVTFLVGGNAEALFAVVRRHEINEGFLVTGMLFPLVLPPTIPLWQVALGILFGVVVGKEIFGGTGMNVLNPALTARAFLFFAYPAEISGDKVW--IAAQTSPDGYSGATALANGAVGGLPSIEQTTGGMS--------WWDAFLGLVPGSMGETSVLACLIGALILLLT 285          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A6L8HSV1_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Acidobacteriia bacterium TaxID=2081523 RepID=A0A6L8HSV1_9BACT)

HSP 1 Score: 246 bits (629), Expect = 6.940e-78
Identity = 127/180 (70.56%), Postives = 146/180 (81.11%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C+ HGALYYLP+LIVTF VGG+ E LFA++RKH++NEGFLVTGMLFPL+LPPTIPLWQVALGI FGVIIGKEIFGGTGMNIFNPAL +RAFLFFAYPAQISGD+VW  + A   VDG SGAT L A A ++ P        AL G  ++W+ AF+G VPGSMGETS LACLIGA +L+ T
Sbjct:  112 CILHGALYYLPVLIVTFAVGGNCEALFAVVRKHDINEGFLVTGMLFPLVLPPTIPLWQVALGIAFGVIIGKEIFGGTGMNIFNPALMSRAFLFFAYPAQISGDQVW--IAADTTVDGSSGATWL-AEAALSGP-------EALAGGSVSWMQAFVGFVPGSMGETSTLACLIGALVLVAT 281          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A1V5YVQ9_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YVQ9_9BACT)

HSP 1 Score: 245 bits (625), Expect = 4.350e-77
Identity = 122/185 (65.95%), Postives = 143/185 (77.30%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALT-----GLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C  HGALY+LP+LIVTF+VGG IEV  AIIRKH+VNEGF VTG L PLILPPTIPLWQVAL   FGV+IGKE+FGGTGMNIFNPAL  RAFL+FAYP Q SGDKVW A+  +   DGFSGAT L  VA +       AW++A++     G  ++WLDAF+G +PGSMGETS LACL+GA IL++T
Sbjct:  113 CFVHGALYFLPVLIVTFMVGGSIEVAVAIIRKHDVNEGFFVTGFLIPLILPPTIPLWQVALATAFGVVIGKEVFGGTGMNIFNPALVTRAFLYFAYPIQSSGDKVWVALNPAQAADGFSGATLLARVAEIPPVADGQAWQTAVSTMQINGKAVSWLDAFIGWIPGSMGETSTLACLVGAAILLIT 297          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A1V6F0H7_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6F0H7_9BACT)

HSP 1 Score: 245 bits (625), Expect = 4.350e-77
Identity = 123/185 (66.49%), Postives = 143/185 (77.30%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDI-----TWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            CL HGALY++P+L+V FVVGG IEV  A+I+KHEVNEGF VTG L P ILPPTIPLWQVAL   FGV+IGKEIFGGTGMNIFNPAL  RAFL+FAYP Q SGDKVW AV+    VDGFSGAT L  +A +    A  A+ +A+ G+ +     TW+DAFLG +PGSMGETS LACLIGA +LI+T
Sbjct:  113 CLVHGALYFIPVLVVAFVVGGGIEVFVAMIKKHEVNEGFFVTGFLIPCILPPTIPLWQVALATAFGVVIGKEIFGGTGMNIFNPALVTRAFLYFAYPIQNSGDKVWVAVSPEQAVDGFSGATLLARIAEIPPDTADKAYATAINGMVVNGKMVTWMDAFLGWIPGSMGETSTLACLIGAALLILT 297          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A6L7UAK4_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6L7UAK4_9BACT)

HSP 1 Score: 243 bits (619), Expect = 2.360e-76
Identity = 126/180 (70.00%), Postives = 142/180 (78.89%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C+ HGALYYLP+L+VTF++GGH E LF+++R+HE+NEGFLVTGMLFPL LPPTIPLWQVALGI FG+IIGKEIFGGTGMNI NPALTARAFLFFAYPA+ISGDKVW  V A    DG SGAT L   A       T   +  L GL  +W DAFLG +PGSMGETS L CLIGA ILI+T
Sbjct:  115 CMLHGALYYLPVLLVTFLIGGHCEALFSVVRRHEINEGFLVTGMLFPLTLPPTIPLWQVALGIAFGIIIGKEIFGGTGMNILNPALTARAFLFFAYPAEISGDKVW--VAAQTSADGVSGATWLAEAA-------TLGHQVLLDGL--SWWDAFLGLIPGSMGETSTLGCLIGALILIVT 283          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A2D8R658_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2D8R658_9BACT)

HSP 1 Score: 241 bits (615), Expect = 8.920e-76
Identity = 126/180 (70.00%), Postives = 141/180 (78.33%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C+ HGALYYLP+L+VTF VGG  E LFAI+R+HE+NEGFLVTGMLFPLILPPTIPLWQ ALGI+FGV+IGKEIFGGTGMNI NPALTARAF+FFAYPA +SGD VW A T SN  DG SGAT L   A              LTGLD  W DAF+G VPGSMGETS LACL+GA +L++T
Sbjct:  114 CVIHGALYYLPVLMVTFAVGGAWEALFAIVRRHEINEGFLVTGMLFPLILPPTIPLWQAALGISFGVVIGKEIFGGTGMNILNPALTARAFIFFAYPADMSGDAVWVAATTSN--DGVSGATWLAQTA--------LGGAEVLTGLD--WEDAFIGFVPGSMGETSTLACLLGAAVLVIT 281          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A6B0W0Q8_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=6 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6B0W0Q8_9BACT)

HSP 1 Score: 241 bits (614), Expect = 1.960e-75
Identity = 120/181 (66.30%), Postives = 146/181 (80.66%), Query Frame = 0
Query:    4 HGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASN--QVDGFSGATALGAVAGVTDPGATDAWKSALTGLD--ITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            HGALYY+P+L+VTF VGG  E LFA++R+H+VNEGFLVTGMLFPL+LPPTIPLWQVA+GI+FGV++GKEIFGGTG N+ NPALTAR FLFFAYPAQISGD VW +   S+    DG+SGATALG +A +     +DA    L+ ++  ++W+ AFLG +PGSMGETS LACLIGA ILI T
Sbjct:  117 HGALYYVPVLVVTFAVGGAWEGLFAVVRRHDVNEGFLVTGMLFPLVLPPTIPLWQVAVGISFGVVVGKEIFGGTGYNVLNPALTARVFLFFAYPAQISGDAVWISARTSSGKDADGYSGATALGEIAVLEAVEGSDAPLDGLSAIEGKVSWMQAFLGDIPGSMGETSALACLIGAAILIAT 297          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A831ZKD3_9DELT (Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Nannocystis exedens TaxID=54 RepID=A0A831ZKD3_9DELT)

HSP 1 Score: 239 bits (610), Expect = 5.490e-75
Identity = 124/180 (68.89%), Postives = 139/180 (77.22%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C  HG LY+LP+  VT  VGG+IEV+FAI+R+HEV EGFLVTGMLFPLILPPTIPLWQVALGI FGVI+ KE+FGG GMN+ NPALT+RAFLFFAYPA ISGD VW AV  +   DG SGAT L   A   DPG       ALT   ITW+DAF+G +PGSMGETS LACLIGA ILI+T
Sbjct:  114 CSMHGLLYFLPVYAVTMFVGGNIEVIFAIVRRHEVTEGFLVTGMLFPLILPPTIPLWQVALGIAFGVILAKEVFGGVGMNVLNPALTSRAFLFFAYPAAISGDAVWRAVQPTMLADGMSGATWLANAA--ADPG-------ALTNGTITWMDAFIGTIPGSMGETSALACLIGAAILIIT 284          
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Match: A0A2E4KS06_9BACT (Na(+)-translocating NADH-quinone reductase subunit B n=6 Tax=root TaxID=1 RepID=A0A2E4KS06_9BACT)

HSP 1 Score: 237 bits (604), Expect = 4.040e-74
Identity = 125/180 (69.44%), Postives = 141/180 (78.33%), Query Frame = 0
Query:    1 CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLILPPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQISGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITWLDAFLGKVPGSMGETSVLACLIGAGILIMT 180
            C+ HGALYYLP+L VTF VGG  E LFAI+RKHE+NEGFLVTGMLFPLILPPTIPLWQVALGI+FGV+IGKEIFGGTGMN+ NPALTARAF+FFAYPA +SGD  W  +TA+   DG SGAT L   A   D         AL GLD  W +AF+G VPGSMGETS LACL+GA +LI+T
Sbjct:  114 CVIHGALYYLPVLGVTFAVGGAWEALFAIVRKHEINEGFLVTGMLFPLILPPTIPLWQVALGISFGVVIGKEIFGGTGMNVLNPALTARAFVFFAYPANMSGDTAW--ITAATNTDGVSGATWLALTALDGD--------QALAGLD--WGEAFMGFVPGSMGETSALACLLGAAVLIIT 281          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119839.4083.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7C1CMU1_9BACT1.200e-7970.97Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A3M2C2N3_9BACT1.370e-7870.33Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A6L8HSV1_9BACT6.940e-7870.56Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A1V5YVQ9_9BACT4.350e-7765.95Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A1V6F0H7_9BACT4.350e-7766.49Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A6L7UAK4_9BACT2.360e-7670.00Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A2D8R658_9BACT8.920e-7670.00Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A6B0W0Q8_9BACT1.960e-7566.30Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A831ZKD3_9DELT5.490e-7568.89Na(+)-translocating NADH-quinone reductase subunit... [more]
A0A2E4KS06_9BACT4.040e-7469.44Na(+)-translocating NADH-quinone reductase subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004338Ion-translocating oxidoreductase NqrB/RnfDPFAMPF03116NQR2_RnfD_RnfEcoord: 7..180
e-value: 2.1E-50
score: 171.8
IPR004338Ion-translocating oxidoreductase NqrB/RnfDPANTHERPTHR30578ELECTRON TRANSPORT COMPLEX PROTEIN RNFDcoord: 2..180
NoneNo IPR availablePANTHERPTHR30578:SF1coord: 2..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 99..180
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 70..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..69
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availableTMHMMTMhelixcoord: 5..27
NoneNo IPR availableTMHMMTMhelixcoord: 39..61

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119839contigM-pyrifera_M_contig119839:1..540 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119839.4083.1mRNA_M-pyrifera_M_contig119839.4083.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119839 1..540 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119839.4083.1 ID=prot_M-pyrifera_M_contig119839.4083.1|Name=mRNA_M-pyrifera_M_contig119839.4083.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
CLFHGALYYLPILIVTFVVGGHIEVLFAIIRKHEVNEGFLVTGMLFPLIL
PPTIPLWQVALGITFGVIIGKEIFGGTGMNIFNPALTARAFLFFAYPAQI
SGDKVWTAVTASNQVDGFSGATALGAVAGVTDPGATDAWKSALTGLDITW
LDAFLGKVPGSMGETSVLACLIGAGILIMT
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004338NqrB/RnfD