mRNA_M-pyrifera_M_contig119828.4080.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: UPI000A2C03B6 (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=UPI000A2C03B6) HSP 1 Score: 91.3 bits (225), Expect = 8.100e-22 Identity = 40/66 (60.61%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 43 NLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAAR---DFDASQVPPEWY 231
N GVWGSL+++ + + +K GTLVGVD+ GNKYYENK Y Y R+RWVDY D+D SQVPPEW+
Sbjct: 20 NGGVWGSLQKLYRTDELKMGTLVGVDKFGNKYYENKMYFYSRNRWVDYTEAVNLDYDGSQVPPEWH 85
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: UPI0006255959 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Orussus abietinus TaxID=222816 RepID=UPI0006255959) HSP 1 Score: 88.6 bits (218), Expect = 9.060e-21 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 43 NLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAAR---DFDASQVPPEWYG 234
N G+ GSLK + + + +K GTL+G+D+ GNKYYEN Y YGR+RWV YA D+DASQVPPEW+G
Sbjct: 20 NGGLLGSLKTLYREDDLKVGTLIGIDKYGNKYYENNYYFYGRNRWVSYAKEVGLDYDASQVPPEWFG 86
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: A0A6M2DG58_9NEOP (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Xenopsylla cheopis TaxID=163159 RepID=A0A6M2DG58_9NEOP) HSP 1 Score: 87.0 bits (214), Expect = 3.940e-20 Identity = 41/82 (50.00%), Postives = 58/82 (70.73%), Query Frame = 1
Query: 1 MAVKKVGQYLAEVR-NLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAAR---DFDASQVPPEWYG 234
+A+ KV ++ + + G+ GSLK++ + + +K G L+G D+ GNKYYENKEY YGR RWVDYA ++DASQV PEW+G
Sbjct: 5 LALDKVAKFFRIIHAHGGIRGSLKRLLRTDDLKIGALIGEDKYGNKYYENKEYFYGRSRWVDYAPHVGLNYDASQVCPEWFG 86
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: A0A397TSQ9_9GLOM (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TSQ9_9GLOM) HSP 1 Score: 85.9 bits (211), Expect = 1.440e-19 Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 1
Query: 37 VRNLGVWGSLKQIRQMNLI---KPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAARDFDASQVPPEWY 231
++N + G + +RQ+ I K GTLVG+D+ GNKYYENKE YGRDRWVDYA DASQ+PPEW+
Sbjct: 26 IKNFLIIGPREYLRQLLYISDTKAGTLVGIDQFGNKYYENKEEFYGRDRWVDYAQHYGDASQIPPEWH 93
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: UPI000E6E1F9A (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Ctenocephalides felis TaxID=7515 RepID=UPI000E6E1F9A) HSP 1 Score: 85.5 bits (210), Expect = 1.590e-19 Identity = 39/67 (58.21%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 43 NLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAAR---DFDASQVPPEWYG 234
N G+ GSL ++ + + +K GTLVG D+ GNKYYEN EY YGR+RWVDYA ++DASQV PEW+G
Sbjct: 20 NGGIRGSLAKLARTDDLKLGTLVGEDKYGNKYYENNEYFYGRNRWVDYAPHVGLNYDASQVCPEWFG 86
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: A0A8K0KIY2_LADFU (Uncharacterized protein n=1 Tax=Ladona fulva TaxID=123851 RepID=A0A8K0KIY2_LADFU) HSP 1 Score: 85.5 bits (210), Expect = 1.630e-19 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 MAVKKVGQYLAEV-RNLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYA---ARDFDASQVPPEWYG 234
+ + K+G+ + N G+ SL ++ + + +K GTLVG D+ GNKYYENK Y YGR+RWV+YA A D+D SQVP EWYG
Sbjct: 7 LGLDKLGRLFQIISHNGGIRASLYKLYRQDELKIGTLVGEDKFGNKYYENKMYFYGRNRWVEYADHIAMDYDGSQVPAEWYG 88
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: UPI0002657A0E (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002657A0E) HSP 1 Score: 85.1 bits (209), Expect = 1.980e-19 Identity = 40/82 (48.78%), Postives = 54/82 (65.85%), Query Frame = 1
Query: 1 MAVKKVGQYLAEVRNLGVW-GSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAAR---DFDASQVPPEWYG 234
M + KV + L ++ G W SL ++ + + +K G LVG D GN+YYENKEY GRDRWV+YA + D+D SQ+P EWYG
Sbjct: 1 MIIDKVHKTLRVIQENGGWLNSLLKLYRYDTLKSGRLVGTDDYGNRYYENKEYFMGRDRWVEYADKVRLDYDGSQIPAEWYG 82
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: A0A1B6FMS2_9HEMI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=3 Tax=Proconiini TaxID=565685 RepID=A0A1B6FMS2_9HEMI) HSP 1 Score: 84.7 bits (208), Expect = 3.610e-19 Identity = 40/82 (48.78%), Postives = 57/82 (69.51%), Query Frame = 1
Query: 1 MAVKKVGQYLAEVR-NLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAAR---DFDASQVPPEWYG 234
+A+ K+G + ++ N G+ GS ++ +M +K GTLVGVD+ GNKY+EN Y YGR+RWV+YA D+D SQVP EW+G
Sbjct: 7 LALDKLGTLFSIIKHNGGIVGSAVKLFRMEELKIGTLVGVDKYGNKYFENNYYFYGRNRWVEYADEVWLDYDGSQVPAEWFG 88
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: UPI001C9B7433 (probable NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Colletes gigas TaxID=935657 RepID=UPI001C9B7433) HSP 1 Score: 84.3 bits (207), Expect = 4.400e-19 Identity = 41/82 (50.00%), Postives = 56/82 (68.29%), Query Frame = 1
Query: 1 MAVKKVGQYLAEVR-NLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYAAR---DFDASQVPPEWYG 234
+ + KV Q +R N G++ SL+ I + + +K GTLVG D+ GNKYYEN EY YGR+RWV Y+ + D+D SQV PEW+G
Sbjct: 5 LGLDKVAQLFRIIRANGGIFKSLRNIYRHDELKIGTLVGEDKFGNKYYENNEYFYGRNRWVIYSDQFGMDYDGSQVTPEWFG 86
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Match: A0A6P7FCC9_DIAVI (NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 12 n=1 Tax=Diabrotica virgifera virgifera TaxID=50390 RepID=A0A6P7FCC9_DIAVI) HSP 1 Score: 84.3 bits (207), Expect = 4.510e-19 Identity = 35/65 (53.85%), Postives = 48/65 (73.85%), Query Frame = 1
Query: 49 GVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKEYLYGRDRWVDYA---ARDFDASQVPPEWYG 234
G+ SL ++ +M+ ++PGTLVG D+ GNKYYEN Y YGR+RW++YA D+D SQVP EW+G
Sbjct: 22 GIRASLYKLYRMDNLRPGTLVGTDKYGNKYYENPHYFYGRNRWIEYAPYYGLDYDGSQVPAEWFG 86 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119828.4080.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119828.4080.1 >prot_M-pyrifera_M_contig119828.4080.1 ID=prot_M-pyrifera_M_contig119828.4080.1|Name=mRNA_M-pyrifera_M_contig119828.4080.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp MAVKKVGQYLAEVRNLGVWGSLKQIRQMNLIKPGTLVGVDRVGNKYYENKback to top mRNA from alignment at M-pyrifera_M_contig119828:164..478+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119828.4080.1 ID=mRNA_M-pyrifera_M_contig119828.4080.1|Name=mRNA_M-pyrifera_M_contig119828.4080.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=315bp|location=Sequence derived from alignment at M-pyrifera_M_contig119828:164..478+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119828:164..478+ >mRNA_M-pyrifera_M_contig119828.4080.1 ID=mRNA_M-pyrifera_M_contig119828.4080.1|Name=mRNA_M-pyrifera_M_contig119828.4080.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=480bp|location=Sequence derived from alignment at M-pyrifera_M_contig119828:164..478+ (Macrocystis pyrifera P11B4 male)back to top |