mRNA_M-pyrifera_M_contig119825.4079.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig119825.4079.1
Unique NamemRNA_M-pyrifera_M_contig119825.4079.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: A0A1C7NDV2_9FUNG (Prolyl endopeptidase (Fragment) n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NDV2_9FUNG)

HSP 1 Score: 112 bits (280), Expect = 4.350e-26
Identity = 58/139 (41.73%), Postives = 81/139 (58.27%), Query Frame = 1
Query:   13 PGGNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLPCYNVDDYSSTVVQVPSAGGVLVPMVVTRHNEA-VDGA-PALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNKV 423
            PG N+DF+   VRFS+ SP +  S ++YD+  Q+L  V    +  ++  +Y+ + V VPS  G  VP+ +    E  ++G  P L++ YGAYG  T + F     PLL RGW IA P VRGG ELG  W+  GKL NK+
Sbjct:  400 PGTNLDFHTDQVRFSIQSPFMHESTFEYDMSTQKLSPVRVQPVKNFDKSNYTCSQVHVPSHDGKKVPVTLLHKKEIKLNGKNPVLMRSYGAYGTCTDIDFRVEQFPLLERGWVIALPHVRGGSELGRDWYEEGKLKNKM 538          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: A0A1Y1I2D0_KLENI (Prolyl endopeptidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I2D0_KLENI)

HSP 1 Score: 105 bits (261), Expect = 1.580e-23
Identity = 60/169 (35.50%), Postives = 87/169 (51.48%), Query Frame = 1
Query:    4 SVQPGGNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLP---------------------------CYNVDDYSSTVVQVPSAGGVLVPMVVTRHNEA-VDGA-PALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNKV 423
            S++PG N  F A ++RF+++SP  P + +DYD+    L  V+  ++P                            + ++ Y+ T V   SA G  VP+ VT  ++  +DG  PAL+ GYGAYGV    ++ S  L LL RGW +A   VRGGGE G  WH +G+  NKV
Sbjct:  347 SIEPGANAAFEAESLRFTVSSPVTPDTVFDYDMSYHTLTRVKQITVPGLDVSPANATNVNTAASKTAPLIRPAPLHTLNGYTCTRVTATSADGTAVPVTVTHASDLPLDGRNPALLIGYGAYGVPQKTTWSSHTLSLLDRGWVVATAHVRGGGEFGKRWHEAGRKENKV 515          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: A0A0B7MRN2_9FUNG (Prolyl endopeptidase n=4 Tax=Mucoraceae TaxID=34489 RepID=A0A0B7MRN2_9FUNG)

HSP 1 Score: 100 bits (248), Expect = 8.940e-22
Identity = 50/141 (35.46%), Postives = 78/141 (55.32%), Query Frame = 1
Query:    7 VQPGGNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLPCYNVDDYSSTVVQVPSAGGVLVPMVVTRHNEA-VDGA-PALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNKV 423
            + PG N+DF     RFS+ SP    S Y+YD+  ++L  +   ++  ++   Y+ + + V S     +P+ +    +  ++G  P L++ YGAYG +T + F     PL+ RGW IA P VRGGGELG  W+  GKL  K+
Sbjct:  399 LNPGTNLDFNTDVFRFSVISPFTHESTYEYDMSTRKLNPIRVQTIRKFDRSKYTCSQIHVKSHDDRQIPVTLIHKKDIEMNGRNPVLMRSYGAYGTSTDIEFRVEQFPLIERGWVIALPHVRGGGELGKDWYEDGKLDKKM 539          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: A0A3N5XI25_9BACT (S9 family peptidase n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5XI25_9BACT)

HSP 1 Score: 97.8 bits (242), Expect = 5.710e-21
Identity = 54/143 (37.76%), Postives = 85/143 (59.44%), Query Frame = 1
Query:    4 SVQPGGNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTS-LPCYNVDDYSSTVVQVPSAGGVLVPM-VVTRHNEAVDG-APALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNKV 423
            SV P  N ++  + +R+S  S   P+S +DYD+E +Q KL++ T  L  Y+   Y S  +   +  G  + + +V R   A +G AP L++GYG+YG   +++F S  L LL RG+ +A   +RGGGE+G SWH  G++ NK+
Sbjct:  378 SVFPSQNREWNTTKLRYSYQSFITPSSIFDYDMETRQSKLLKQTEVLGGYDPKQYRSERIYAAAKDGTKIAISLVYRKGLAKNGQAPLLLEGYGSYGYPNAVTFSSNDLSLLDRGFVVATAHIRGGGEMGKSWHDQGRMKNKI 520          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: J5TT01_9PORP (Peptidase, S9A/B/C family, catalytic domain protein n=8 Tax=Porphyromonadaceae TaxID=171551 RepID=J5TT01_9PORP)

HSP 1 Score: 96.7 bits (239), Expect = 1.430e-20
Identity = 52/137 (37.96%), Postives = 82/137 (59.85%), Query Frame = 1
Query:   19 GNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLPC-YNVDDYSSTVVQVPSAGGVLVPMVVTRHNEAV-DG-APALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNK 420
            GN  + A+T+R+S +SP+ P S Y+YD+E+++ +L++   +   ++ +DY+   +   +  GV VPM +    E   DG APAL+ GYG+YGV     F   VL L+ RG+  A+  VRGG +LG  W+  GK + K
Sbjct:  341 GNSTYEATTIRYSYSSPNRPASLYEYDMEQRESRLLKQQEVGGGFSPEDYTVERLWATAPDGVRVPMTLLYRKELQRDGSAPALLYGYGSYGVTLDAHFSVSVLSLVDRGFVYAQAQVRGGSDLGEQWYEDGKFLKK 477          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: UPI0013A6DC84 (S9 family peptidase n=1 Tax=Lentilitoribacter sp. Alg239-R112 TaxID=2305987 RepID=UPI0013A6DC84)

HSP 1 Score: 96.7 bits (239), Expect = 1.450e-20
Identity = 50/138 (36.23%), Postives = 82/138 (59.42%), Query Frame = 1
Query:   19 GNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLPC-YNVDDYSSTVVQVPSAGGVLVPMVVTRHNEA-VDG-APALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNKV 423
            G  ++    VRFS +S + P+  YDY++  ++  L+++  +P  +N+DDY +  +  PS  GVLVP+ +  H +  +DG APAL+ GYG+YG++   SF +  L L+ RG+  A   +RGG + G  W+  GK   K+
Sbjct:  382 GAAEYDTEIVRFSYSSMTTPSQLYDYNMRTRERTLLKTQDVPSGHNIDDYITRRIMAPSHDGVLVPVSILYHKDTKLDGSAPALLYGYGSYGMSIPASFNTNCLSLVDRGFIYAIAHMRGGKDKGFQWYEDGKREKKI 519          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: A0A3N5GDK8_9BACT (S9 family peptidase (Fragment) n=1 Tax=bacterium TaxID=1869227 RepID=A0A3N5GDK8_9BACT)

HSP 1 Score: 94.4 bits (233), Expect = 4.900e-20
Identity = 54/142 (38.03%), Postives = 82/142 (57.75%), Query Frame = 1
Query:    4 SVQPGGNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTS-LPCYNVDDYSSTVVQVPSAGGVLVPM-VVTRHNEAVDG-APALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNK 420
            S  P GN +F  +T +FS  S   P+S +DYD+E ++ KL++    L  Y+   Y+S  +   +  GV VP+ +V R +   DG AP  +  YG+YG ++ + F S  L LL RG   A   +RGGG++G +WH  G++MNK
Sbjct:   69 SAFPSGNSEFDTATYQFSYQSFVTPSSIFDYDMETRERKLLKQYEVLGGYDPTRYASERIYATAPDGVKVPVSLVHRKDVPRDGTAPLYLTAYGSYGASSPVFFSSNQLSLLDRGVVFALAHIRGGGDMGKTWHDQGRMMNK 210          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: U2IXD6_9PORP (Putative protease 2 n=1 Tax=Porphyromonas sp. oral taxon 278 str. W7784 TaxID=1227272 RepID=U2IXD6_9PORP)

HSP 1 Score: 92.8 bits (229), Expect = 3.210e-19
Identity = 52/137 (37.96%), Postives = 80/137 (58.39%), Query Frame = 1
Query:   19 GNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLPC-YNVDDYSSTVVQVPSAGGVLVPMVVT-RHNEAVDG-APALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNK 420
            GN  + A+T+R++ +SP+ PTS Y+YD+ + + +L++   +   ++ DDY+       +  GV VPM +  R     DG APAL+ GYG+YGV     F   VL L+ RG+  A+  VRGG +LG  W+  GK + K
Sbjct:  384 GNSTYEATTIRYTYSSPNRPTSLYEYDLVRGESRLLKQQEVGGGFSPDDYTVERRWATAPDGVKVPMTLLYRKGLQRDGTAPALLYGYGSYGVTLDAHFSVSVLSLVDRGFVYAQVQVRGGSDLGEQWYEDGKFLKK 520          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: A0A0D5LNX3_MAREN (Peptidase S9 n=1 Tax=Martelella endophytica TaxID=1486262 RepID=A0A0D5LNX3_MAREN)

HSP 1 Score: 92.8 bits (229), Expect = 3.220e-19
Identity = 50/137 (36.50%), Postives = 83/137 (60.58%), Query Frame = 1
Query:   19 GNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLPC-YNVDDYSSTVVQVPSAGGVLVPM-VVTRHNEAVDG-APALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNK 420
            G  ++    +RFS +S + P+  YDY++  +   L+++  +P  +N DDY +  +Q  +A G LVP+ +V R +  +DG APAL+ GYGAYG+    SF +  L L+ RG+  A   +RGG + G +W+ +GK+ +K
Sbjct:  387 GANEYDTDIIRFSYSSMTTPSQLYDYNMATRARTLLKTQEVPSGHNPDDYVTRRIQAKAADGELVPVSIVYRKDTPLDGTAPALLYGYGAYGITIPASFSTNCLSLVDRGFVYAIAHIRGGKDKGFAWYENGKMGSK 523          
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Match: A0A2V9DNF8_9BACT (Oligopeptidase B n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9DNF8_9BACT)

HSP 1 Score: 92.4 bits (228), Expect = 4.380e-19
Identity = 51/136 (37.50%), Postives = 77/136 (56.62%), Query Frame = 1
Query:   22 NVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTS-LPCYNVDDYSSTVVQVPSAGGVLVP--MVVTRHNEAVDGAPALVQGYGAYGVNTSLSFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNK 420
            N +F  +T RF+  S   P+S +DYD++K++ KL++ T  L  Y+   Y S  +   +  G  +P  +V  +  +    AP L+ GYG+YG    +SF S  L LL RG   A   +RGGGE+G +WH  G++MNK
Sbjct:  391 NPEFDTATFRFTYQSLITPSSVFDYDMDKRERKLLKQTEVLGGYDPTKYQSERIYATATDGTRIPISLVYKKGLKRDATAPMLLTGYGSYGFPFPVSFSSNRLSLLDRGLVFAIAHIRGGGEMGKTWHDHGRMMNK 526          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119825.4079.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1C7NDV2_9FUNG4.350e-2641.73Prolyl endopeptidase (Fragment) n=1 Tax=Choanephor... [more]
A0A1Y1I2D0_KLENI1.580e-2335.50Prolyl endopeptidase n=1 Tax=Klebsormidium nitens ... [more]
A0A0B7MRN2_9FUNG8.940e-2235.46Prolyl endopeptidase n=4 Tax=Mucoraceae TaxID=3448... [more]
A0A3N5XI25_9BACT5.710e-2137.76S9 family peptidase n=2 Tax=Acidobacteria bacteriu... [more]
J5TT01_9PORP1.430e-2037.96Peptidase, S9A/B/C family, catalytic domain protei... [more]
UPI0013A6DC841.450e-2036.23S9 family peptidase n=1 Tax=Lentilitoribacter sp. ... [more]
A0A3N5GDK8_9BACT4.900e-2038.03S9 family peptidase (Fragment) n=1 Tax=bacterium T... [more]
U2IXD6_9PORP3.210e-1937.96Putative protease 2 n=1 Tax=Porphyromonas sp. oral... [more]
A0A0D5LNX3_MAREN3.220e-1936.50Peptidase S9 n=1 Tax=Martelella endophytica TaxID=... [more]
A0A2V9DNF8_9BACT4.380e-1937.50Oligopeptidase B n=2 Tax=Acidobacteria bacterium T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119825contigM-pyrifera_M_contig119825:40..462 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score109.4
Seed ortholog evalue1.4e-21
Seed eggNOG ortholog112098.XP_008605909.1
Preferred namePREPL
KEGG koko:K04485
Hectar predicted targeting categoryother localisation
GOsGO:0001505,GO:0003674,GO:0003824,GO:0004175,GO:0004252,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005856,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0010646,GO:0012505,GO:0016787,GO:0017157,GO:0017158,GO:0017171,GO:0019538,GO:0023051,GO:0032386,GO:0032879,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044238,GO:0044424,GO:0044444,GO:0044464,GO:0046928,GO:0050789,GO:0050794,GO:0050804,GO:0051046,GO:0051049,GO:0051588,GO:0060341,GO:0060627,GO:0065007,GO:0065008,GO:0070011,GO:0070012,GO:0071704,GO:0098693,GO:0099177,GO:0140096,GO:1901564,GO:1902803,GO:1903305,GO:1903530,GO:2000300
EggNOG free text desc.serine-type exopeptidase activity
EggNOG OGsCOG1505@1,KOG2237@2759
COG Functional cat.E
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03400
Exons1
Model size423
Cds size423
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815717.6719966-CDS-M-pyrifera_M_contig119825:39..4621622815717.6719966-CDS-M-pyrifera_M_contig119825:39..462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119825 40..462 -
1692277536.4312787-CDS-M-pyrifera_M_contig119825:39..4621692277536.4312787-CDS-M-pyrifera_M_contig119825:39..462Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119825 40..462 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119825.4079.1prot_M-pyrifera_M_contig119825.4079.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig119825 40..462 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig119825.4079.1

>prot_M-pyrifera_M_contig119825.4079.1 ID=prot_M-pyrifera_M_contig119825.4079.1|Name=mRNA_M-pyrifera_M_contig119825.4079.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=141bp
GSVQPGGNVDFYASTVRFSLTSPSIPTSWYDYDIEKQQLKLVESTSLPCY
NVDDYSSTVVQVPSAGGVLVPMVVTRHNEAVDGAPALVQGYGAYGVNTSL
SFESRVLPLLSRGWTIARPFVRGGGELGPSWHSSGKLMNKV
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mRNA from alignment at M-pyrifera_M_contig119825:40..462-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig119825.4079.1 ID=mRNA_M-pyrifera_M_contig119825.4079.1|Name=mRNA_M-pyrifera_M_contig119825.4079.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=423bp|location=Sequence derived from alignment at M-pyrifera_M_contig119825:40..462- (Macrocystis pyrifera P11B4 male)
GGCTCCGTGCAGCCCGGGGGGAATGTGGACTTCTACGCGAGTACAGTCCG CTTCTCGTTGACGAGTCCCAGCATTCCGACGTCCTGGTACGACTATGACA TTGAGAAGCAGCAGCTGAAGCTAGTGGAGTCGACCTCTCTGCCGTGCTAC AACGTAGACGACTACTCCTCGACGGTGGTGCAAGTGCCCTCTGCTGGCGG GGTGCTCGTGCCGATGGTGGTCACCCGGCACAACGAGGCTGTTGATGGCG CACCTGCCCTCGTGCAGGGCTACGGCGCCTACGGCGTGAACACGAGTCTC TCCTTCGAGTCGCGTGTGCTGCCGCTGCTGTCGCGTGGCTGGACCATTGC CCGGCCCTTCGTCCGTGGAGGAGGAGAGCTGGGGCCCAGCTGGCACTCCA GTGGCAAGCTCATGAACAAGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig119825:40..462-

>mRNA_M-pyrifera_M_contig119825.4079.1 ID=mRNA_M-pyrifera_M_contig119825.4079.1|Name=mRNA_M-pyrifera_M_contig119825.4079.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=846bp|location=Sequence derived from alignment at M-pyrifera_M_contig119825:40..462- (Macrocystis pyrifera P11B4 male)
GGCTCCGTGCAGCCCGGGGGGAATGTGGACTTCTACGCGAGTACAGTCCG
CTTCTCGTTGACGAGTCCCAGCATTCCGACGTCCTGGTACGACTATGACA
TTGAGAAGCAGCAGCTGAAGCTAGTGGAGTCGACCTCTCTGCCGTGCTAC
AACGTAGACGACTACTCCTCGACGGTGGTGCAAGTGCCCTCTGCTGGCGG
GGTGCTCGTGCCGATGGTGGTCACCCGGCACAACGAGGCTGTTGATGGCG
CACCTGCCCTCGTGCAGGGCTACGGCGCCTACGGCGTGAACACGAGTCTC
TCCTTCGAGTCGCGTGTGCTGCCGCTGCTGTCGCGTGGCTGGACCATTGC
CCGGCCCTTCGTCCGTGGAGGAGGAGAGCTGGGGCCCAGCTGGCACTCCA
GTGGCAAGCTCATGAACAAGGTGGGCTCCGTGCAGCCCGGGGGGAATGTG
GACTTCTACGCGAGTACAGTCCGCTTCTCGTTGACGAGTCCCAGCATTCC
GACGTCCTGGTACGACTATGACATTGAGAAGCAGCAGCTGAAGCTAGTGG
AGTCGACCTCTCTGCCGTGCTACAACGTAGACGACTACTCCTCGACGGTG
GTGCAAGTGCCCTCTGCTGGCGGGGTGCTCGTGCCGATGGTGGTCACCCG
GCACAACGAGGCTGTTGATGGCGCACCTGCCCTCGTGCAGGGCTACGGCG
CCTACGGCGTGAACACGAGTCTCTCCTTCGAGTCGCGTGTGCTGCCGCTG
CTGTCGCGTGGCTGGACCATTGCCCGGCCCTTCGTCCGTGGAGGAGGAGA
GCTGGGGCCCAGCTGGCACTCCAGTGGCAAGCTCATGAACAAGGTG
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