mRNA_M-pyrifera_M_contig11981.4075.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: D7FIG3_ECTSI (Endo/exonuclease/phosphatase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIG3_ECTSI) HSP 1 Score: 498 bits (1283), Expect = 1.760e-166 Identity = 309/639 (48.36%), Postives = 382/639 (59.78%), Query Frame = 1
Query: 37 VVAGMKHAIRATSPVPGGAGTSSGRQRSWIQIPSTRNPARRAEEALPDEDVRIRILSYNVLGPRHGMTKKHEHCPLPLRRWTRRSERLREELLEYHHSKPGGLHAVCLQEVTPKTLRDTWVPFMKELGLDRHVYQPKDPFPKRLYSHRCLGVAVFYNTQHLEKTAERRVFFPDHVQSLKLHSNTKRKRSDVLDAAENVXXXXXXXXXXXXXXGRSTEVVQPKREAVPGGSLPERGGGGEHGTQGGGDSQMDVSGAPSRLEQDLSCRPDAAVMVRLRVKGQEKKADADGDGADG---CERKEEEERSLTLVCAHLWFDPFRPDLKTAQCKMLFDAIERFHEKCGVISTGRNETGVEAGGAARGKTGASGPANLIMCGDFNSVPVMNPAFLPGPLKAEAQTRL---AADGAPPAPSLVNPGN--SSASSIYPPTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIK---------WEADASGSGASMKTRLQRVN--SPAVPALHRPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETGVDGNTAAVHGQLDGVKDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGVELAIL 1896
VVAG+ ++AT P GRQRSW+ IP R A R EA D RIRILSYNVLG R G+ KH+H + +R W R +RLREE+ Y S PGG+ +CLQEVT +TL W+PFM +LGLDRHVYQPK P+R + RCLGVA+FY++ H EK AE RV F + L+ + +RS A+E ++T K A P R GG+ G G + D + SRLEQDL+ R DAA +VRLR+K ++D +GA G E RS T+VCAHL++DP RPDLKTAQC+MLF AI+R HEKCGV S GG A + + GPANL++C DFNS P+++P FLPGPLKA AQ RL AA G+ PS PG+ +++ +YP +Q TASGVY LL+YG VPP+HPEHPD+FIP +K E G G R R +P VPA HRPSG W SGFGGTLEDAYRDRGA +P FTTKTS FSG+IDHIFVS+GEKD L I+GVLAFPPGA L ET G G +R+E P + + G+FGPIP+++WGSDHLALGVEL +L
Sbjct: 27 VVAGIDARVKATLPA--------GRQRSWVDIPRRREGAERKGEAASD---RIRILSYNVLGARQGLADKHDHVGVDIRNWPTRRDRLREEIWSYCKSDPGGVQVICLQEVTFRTLGYDWLPFMAKLGLDRHVYQPKSDRPQRRHRSRCLGVAIFYSSTHFEKMAEVRVVFSEETLGLREDRGREGERSHSSRASE--------LPEAVPAAPKATTTRAGKGAAPPCDQFLRRVYGGDTGR--GAKREQDPA-TVSRLEQDLANRHDAAALVRLRLK----ESDDLEEGASGKGXXXXXXENGRSFTVVCAHLFYDPNRPDLKTAQCQMLFQAIDRLHEKCGVASA-------LGGGKAGSEIPSLGPANLVLCADFNSKPLVDPWFLPGPLKAAAQARLQTTAAIGSQD-PSAPTPGSQPNTSKDVYPSSQATASGVYCLLNYGCVPPTHPEHPDTFIPEWLKRKEQEEISRQELPKVGGGKLWTPRRTRRTRGAPVVPAEHRPSGEWVSGFGGTLEDAYRDRGAVSPSFTTKTSSFSGIIDHIFVSTGEKDSGLAISGVLAFPPGAHLTEGR-ETTSSGEDLEQSGPE--PTPDRQEEHSP----TDPPAWGEFGPIPNKLWGSDHLALGVELVLL 624
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: A0A150GH85_GONPE (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150GH85_GONPE) HSP 1 Score: 87.4 bits (215), Expect = 1.280e-14 Identity = 92/325 (28.31%), Postives = 133/325 (40.92%), Query Frame = 1
Query: 946 LTLVCAHLWFDPFRPDLKTAQCKMLFDAIERFHEKCGVISTGRNETGVEAGGAARGKTGASGPANLIMCGDFNSVPVMNPAFLPGPLKAEAQTRLAADGAPPAPSLVNPGNSSASSIYPPTQRTASGVYSLLSYGVVPPSHPEHPDSFI------PHLIKWEADASGSGASMKTRLQRVNSPAVPALHRPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETGVD--GNTAAVHGQLDGVKDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGVELAIL 1896
L HL+++P PD+K Q +L A+ F + EA GAA G + +++CGDFNS+ A RL P +P P ASGVY+LLS G +PP HP+HP S + DAS + + R PA+P SG L + P TT+T+ F+G +D++++SSG L + LA P + E G+ G +AA G D G+ + + ++ F PIPDE + SDHLA+G EL +L
Sbjct: 176 LLGAVTHLFWNPAFPDVKVLQAALLCGAMAAFAQ--------------EASGAA----GQAASVPVVLCGDFNSL---------------ASKRL--------PDSFDP--------QVPADGLASGVYTLLSRGSLPPDHPDHPHSRVWGPGPGXXXXXXXXDASKAASGGAERF-----PALPM-------GCSGL--RLTSLSAEAFGREPPLTTRTASFAGCLDYVWLSSGP-GSKLAVVSALAMP-------YDNEDGLPSMGPSAAARPAAGGAGDFGXXXGRRDGSWRDPLADIAFRPIPDEEYPSDHLAVGGELLLL 429
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: A0A7S4C664_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4C664_CHRCT) HSP 1 Score: 65.5 bits (158), Expect = 7.250e-9 Identity = 50/199 (25.13%), Postives = 80/199 (40.20%), Query Frame = 1
Query: 808 RLEQDLSCRPDAAVMVRLRVKGQEKKADADGDGADGCERKEEEERSLTLVCAHLWFDPFRPDLKTAQCKMLFDAIERFHEKCGVISTGRNETGVEAGGAARGKTGASGPANLIMCGDFNSVPVMNPAFLPGPLKAEAQTRLAADGAPPAPSLVNPGNSSASSIYPPTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLI 1404
RL + L + +A +M+ LR + + C + + HL++DP+RP++K AQ +++ +A RF +C PA +++ GDFNSVP + P F+ G +E + R + + S VY L S G+ P HPEHPD F P +
Sbjct: 18 RLRETLHMQDEAVLMLLLRHRA-----------SGAC---------VLVATTHLFWDPYRPEVKAAQAELVAEATTRFLIEC------------------------DRPAAVVITGDFNSVPHLQPEFI-GIDVSEEEMR---------------------------ENSLSAVYQLYSQGICPARHPEHPDRFKPKAL 144
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: D8UDG9_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDG9_VOLCA) HSP 1 Score: 66.2 bits (160), Expect = 1.000e-7 Identity = 62/201 (30.85%), Postives = 87/201 (43.28%), Query Frame = 1
Query: 1294 IYPPTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIKWEADASGSGASMKTRLQRVNSPAVPALHRPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETGVDGNTAAVHGQLDGVKDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGVELAIL 1896
I+ P ASGVYSLLS+G +PP HP+HP + + WE + S + PAVP L + P TT+T+ ++G ID +++S G D ++ LA P D + G DG G DG G EA + + F IPDE + SDHLA+G E+ +L
Sbjct: 341 IWVPPGGLASGVYSLLSHGSLPPKHPDHPATRV-----WEGEPPAPPGSQRF-------PAVPLTSAQL---------QLTSMNAEFFGREPPLTTRTATWAGCIDFVWLSRG----DFAVSSALAMPYSDDGLPP---LGPDG------GGGDG--------GGREASWRDPFADIAFTAIPDEFFPSDHLAVGGEIMVL 499
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: A0A835WE92_CHLIN (Endo/exonuclease/phosphatase domain-containing protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WE92_CHLIN) HSP 1 Score: 65.1 bits (157), Expect = 2.340e-7 Identity = 60/198 (30.30%), Postives = 85/198 (42.93%), Query Frame = 1
Query: 1303 PTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIKWEADASGSGASMKTRLQRVNSPAVPALHRPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETGVDGNTAAVHGQLDGV-KDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGVELAI 1893
P ASGVY+LL+ G +PPSHP+HP S G G + + Q + + + L +Y P TT+T+ F+G +D+IF+S + D+ T L + PG + E+G G A G DG D R P F PIP+EV+ SDHL+L V L +
Sbjct: 348 PRDGQASGVYALLTRGSLPPSHPDHPGS---------RRRPGEGTNADFKGQPLTTSGLQ----------------LASSYVIAHGTDPPLTTRTNNFAGCLDYIFISP--QHFDVLRTLELPYEPGWEDEEGRGESGGRGKGAG--GGADGTYPDLRDPMDLP------------FPPIPNEVFPSDHLSLAVILGL 504
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: A0A7S4DBB1_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBB1_HETAK) HSP 1 Score: 65.1 bits (157), Expect = 2.360e-7 Identity = 70/251 (27.89%), Postives = 99/251 (39.44%), Query Frame = 1
Query: 1138 NLIMCGDFNSVPVMNPAFLPGPLKAEAQTRLAADGAPPAPSLVNPGNSSASSIYPPTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIKWEADASGSGASMKTRL-QRVNSPAVPALHRPSGRWSSGFGGTLEDAYR--DRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETGVDGNTAAVHGQLDGVKDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGV 1881
++I CGD NSVP + +LPG + + L + + P + S VY+LL +G V PSH +HPD+ HL + A A+ + L ++ S A R G G L + Y D P FTTKT+ F ID+++ G KD + + +L FP E ER F P+P++ WGSDHLALGV
Sbjct: 314 HIIFCGDMNSVPYVQEEWLPGNKEMRYYQTKDIE------ILESSDKFALGRNVPESAEDMSAVYALLHFGEVRPSHVQHPDAL--HLHRTTAAATKDSPGKQGGLAEKEGSSKGSAAGRSVGLLEGPRG--LRNLYMEGDGRMHLPSFTTKTNVFCATIDYLW---GTKD--VVVEQLLQFP------------------------------ENTER---------------FSPVPNQFWGSDHLALGV 504
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: F0VCW4_NEOCL (Os10g0412100 protein, related n=1 Tax=Neospora caninum (strain Liverpool) TaxID=572307 RepID=F0VCW4_NEOCL) HSP 1 Score: 60.8 bits (146), Expect = 4.610e-6 Identity = 77/296 (26.01%), Postives = 111/296 (37.50%), Query Frame = 1
Query: 946 LTLVCA-HLWFDPFRPDLKTAQCKMLFDAIERFHEKC----------GVISTGRN--------ETG-VEAGGAARGKTGASGPAN-------------------------------LIMCGDFNSVPVMNPAFLPGPLKAEAQTRLAADGAPPAPSLVNPGNSSASSIYPPTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIKWEADASGSGASMKTRLQRVNSPAVPALH-RPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFP 1677
+ VC H+++DP +P++K Q +L ++ R+ E+ G + GR ETG V A RG+T G + LI+ GDFNS+P + + GP E + GN + R SGVY LL+ G+V PSHPEHP SF P+ V + AVP L RP + AY++ PRFT T F G +D+IF + + + VL+ P
Sbjct: 196 IVHVCTTHVFWDPRQPEVKLVQAFLLAGSLRRYVEEREKDAEEKPSGGQLPAGRRREARRENGETGAVSAAEGGRGETQREGERDGKGKGSEESDTAQEGSPERGETAFGLVRDSPLIIGGDFNSMPFQSVSKAAGPNGREKE-----------------GNCKNAE-----SRRHSGVYQLLTQGLVLPSHPEHPVSFHPN---------------------VPADAVPPLTIRP-----------FQSAYKEVLGEEPRFTNFTRDFQGCLDYIFFDN------VAVKAVLSIP 431
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: A8IJP0_CHLRE (CCR4-NOT transcription complex, subunit 6-like protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A8IJP0_CHLRE) HSP 1 Score: 59.7 bits (143), Expect = 8.010e-6 Identity = 56/200 (28.00%), Postives = 81/200 (40.50%), Query Frame = 1
Query: 1303 PTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIKWEADASGSGASMKTRLQRVNSPAVPALHRPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETG---VDGNTAAVHGQLDGVKDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGVELAI 1893
P ASGVY+LL+ G +PPSHP+HP S G A+ + Q + + + L +Y P TT+T+ F+G +D+IFVS + D+ T L + + A + G G G GV+D F PIP+EV+ SDHL+L V L +
Sbjct: 211 PRDGQASGVYALLTRGSLPPSHPDHPAS---------RRRPGEAANADFKGQPLTTSGIQ----------------LASSYVVAHGMDPPLTTRTNNFAGCLDYIFVSP--RHFDVLRTLELPYEHSSGEEAPRGDPGRGGAGGGKGEAAGTYPGVRDPMDVP---------------FPPIPNEVFPSDHLSLAVVLGL 368
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: A0A2K3D327_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D327_CHLRE) HSP 1 Score: 59.7 bits (143), Expect = 1.200e-5 Identity = 56/200 (28.00%), Postives = 81/200 (40.50%), Query Frame = 1
Query: 1303 PTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIKWEADASGSGASMKTRLQRVNSPAVPALHRPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETG---VDGNTAAVHGQLDGVKDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGVELAI 1893
P ASGVY+LL+ G +PPSHP+HP S G A+ + Q + + + L +Y P TT+T+ F+G +D+IFVS + D+ T L + + A + G G G GV+D F PIP+EV+ SDHL+L V L +
Sbjct: 367 PRDGQASGVYALLTRGSLPPSHPDHPAS---------RRRPGEAANADFKGQPLTTSGIQ----------------LASSYVVAHGMDPPLTTRTNNFAGCLDYIFVSP--RHFDVLRTLELPYEHSSGEEAPRGDPGRGGAGGGKGEAAGTYPGVRDPMDVP---------------FPPIPNEVFPSDHLSLAVVLGL 524
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Match: A0A836B9M0_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A836B9M0_9CHLO) HSP 1 Score: 57.4 bits (137), Expect = 5.750e-5 Identity = 59/202 (29.21%), Postives = 80/202 (39.60%), Query Frame = 1
Query: 1303 PTQRTASGVYSLLSYGVVPPSHPEHPDSFIPHLIKWEADASGSGASMKTRLQRVNSPAVPALHRPSGRWSSGFGGTLEDAYRDRGAAAPRFTTKTSQFSGVIDHIFVSSGEKDGDLEITGVLAFPPGADLVASEAETGVDGNTAAVH-----GQLDGVKDERKERGKPEAGQVEGISRGDFGPIPDEVWGSDHLALGVELAI 1893
P SGVY+LL+ G +PPSHP+HP S +R A A R +SGF L +Y P TT+T+ F+G +D+IFVS + D+ T L + P +D E+ G VKD F PIP+EV+ SDHL+L V L +
Sbjct: 307 PRDGLVSGVYALLTRGSLPPSHPDHPAS-----------------------RRRPGEAANADFRGQPLTTSGF--QLASSYVLAHGTDPPLTTRTNNFAGCLDYIFVSP--QHFDVLRTLELPYEPSSDDEGPRGESXXXXXXXXXXXXXAAGTYPDVKDPMDVP---------------FPPIPNEVFPSDHLSLAVILGL 466 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11981.4075.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11981.4075.1 >prot_M-pyrifera_M_contig11981.4075.1 ID=prot_M-pyrifera_M_contig11981.4075.1|Name=mRNA_M-pyrifera_M_contig11981.4075.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=632bp MLLRALLAPAAVVAGMKHAIRATSPVPGGAGTSSGRQRSWIQIPSTRNPAback to top mRNA from alignment at M-pyrifera_M_contig11981:1244..7607- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11981.4075.1 ID=mRNA_M-pyrifera_M_contig11981.4075.1|Name=mRNA_M-pyrifera_M_contig11981.4075.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6364bp|location=Sequence derived from alignment at M-pyrifera_M_contig11981:1244..7607- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11981:1244..7607- >mRNA_M-pyrifera_M_contig11981.4075.1 ID=mRNA_M-pyrifera_M_contig11981.4075.1|Name=mRNA_M-pyrifera_M_contig11981.4075.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=3792bp|location=Sequence derived from alignment at M-pyrifera_M_contig11981:1244..7607- (Macrocystis pyrifera P11B4 male)back to top |