mRNA_M-pyrifera_M_contig119710.4062.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: A0A6L4ZRY6_9BACT (Ankyrin n=1 Tax=bacterium TaxID=1869227 RepID=A0A6L4ZRY6_9BACT) HSP 1 Score: 54.7 bits (130), Expect = 1.120e-6 Identity = 25/50 (50.00%), Postives = 34/50 (68.00%), Query Frame = 1
Query: 16 LHAASISGDAKLVEALLEAGSDPNAKTNTGYTPLVFAASRGNSDVCALLL 165
L A+ GD KL + L AG++PNAK +TGYTPL+FAA SD+ +L+
Sbjct: 45 LFDAAYLGDVKLAKEALAAGANPNAKNDTGYTPLIFAADSNQSDIIKILI 94
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: A0A1J4JQR7_9EUKA (26S proteasome non-ATPase regulatory subunit 10 n=1 Tax=Tritrichomonas foetus TaxID=1144522 RepID=A0A1J4JQR7_9EUKA) HSP 1 Score: 53.1 bits (126), Expect = 2.800e-6 Identity = 25/54 (46.30%), Postives = 36/54 (66.67%), Query Frame = 1
Query: 16 LHAASISGDAKLVEALLEAGSDPNAKTNTGYTPLVFAASRGNSDVCALLLRFGA 177
LH A ++GD LV L+++G DPN +G+TPL+ AAS G + +C LL+ GA
Sbjct: 10 LHWAVMNGDLPLVNKLIQSGDDPNTSDESGWTPLMSAASAGFAQICDSLLQAGA 63
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: A0A3D8R4B6_9EURO (Uncharacterized protein n=1 Tax=Aspergillus mulundensis TaxID=1810919 RepID=A0A3D8R4B6_9EURO) HSP 1 Score: 53.5 bits (127), Expect = 4.400e-6 Identity = 28/64 (43.75%), Postives = 38/64 (59.38%), Query Frame = 1
Query: 4 GLNLLHAASISGDAKLVEALLEAGSDPNAKTNTGYTPLVFAASRGNSDVCALLLRFGASPFLAD 195
G N A++ G +VEAL+EAG DP+ ++G TPL FAA RG+ + LLL +G L D
Sbjct: 79 GWNATILAAVGGKTDIVEALVEAGGDPDFLDHSGRTPLSFAAERGHVETVQLLLGYGVEVALRD 142
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: F2UMR1_SALR5 (3'-5' exonuclease domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UMR1_SALR5) HSP 1 Score: 53.5 bits (127), Expect = 4.870e-6 Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 1
Query: 1 NGLNLLHAASISGDAKLVEALLEAGSDPNAKTNTGYTPLVFAASRGNSDVCALLLRFG 174
N L+ A+ + LV LLE G++PNA TN G+TP+VFAA +G + +L FG
Sbjct: 72 NKTALMFASQLKNGHDLVRFLLERGAEPNASTNRGHTPVVFAAGKGREETLRVLFEFG 129
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: A0A811LM23_9BILA (Hypothetical protein n=1 Tax=Bursaphelenchus okinawaensis TaxID=465554 RepID=A0A811LM23_9BILA) HSP 1 Score: 53.1 bits (126), Expect = 6.110e-6 Identity = 28/60 (46.67%), Postives = 38/60 (63.33%), Query Frame = 1
Query: 1 NGLNLLHAASISGDAKLVEALLEAGSD-PNAKTNTGYTPLVFAASRGNSDVCALLLRFGA 177
+G+NLL S GD V+ L++ G++ N N G+T L+FAA RGN D+C LLL GA
Sbjct: 46 SGMNLLDQGSHKGDVNFVQKLIDRGANVDNRAQNDGFTCLMFAALRGNPDLCDLLLTHGA 105
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: A0A7S1CQV8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CQV8_9STRA) HSP 1 Score: 53.1 bits (126), Expect = 6.510e-6 Identity = 37/84 (44.05%), Postives = 44/84 (52.38%), Query Frame = 1
Query: 4 GLNLLHAASISGDAKLVEALLEAGSDPNAKTN-TGYTPLVFAASRGNSDVCALLLRFG--ASPFLAD--GMIPPHATTATSSTT 240
G N LH A +G +V+ALLEAG+DPN +T G TPL+ A G V LLR ASP D G P HA S+ T
Sbjct: 62 GFNALHVACSNGRLSMVQALLEAGADPNCRTRINGETPLILAVQCGKDRVVECLLRADPPASPLKPDFLGGTPLHAAALRSNAT 145
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: UPI00053CA6C9 (ADP-ribosylation factor GTPase-activating protein AGD4 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053CA6C9) HSP 1 Score: 52.4 bits (124), Expect = 1.220e-5 Identity = 28/65 (43.08%), Postives = 37/65 (56.92%), Query Frame = 1
Query: 4 GLNLLHAASISGDAKLVEALLEAGSDPNAKTNTGYTPLVFAASRGNSDVCALLLRFGASPFLADG 198
G LLH A SGDA ++E LL+ G+D N + G TPL + GN+ +LLR G P + DG
Sbjct: 688 GCTLLHVACHSGDAVMLELLLQFGADLNMRDFHGRTPLHHCIASGNNTFAKILLRRGGRPSIEDG 752
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Match: A0A7J7PLP0_9CHLO (Nucleotide-diphospho-sugar transferase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PLP0_9CHLO) HSP 1 Score: 50.4 bits (119), Expect = 5.810e-5 Identity = 34/94 (36.17%), Postives = 52/94 (55.32%), Query Frame = 1
Query: 4 GLNLLHAASISGDAKLVEALLEAGSDPNAKTNTGY--TPLVFAASRGNSDVCALLLRFGASPFLADGMIPPHATTATSSTTPSQLANQSGHAAL 279
G LHAA++ G A L +AG+D A + G+ T L +AA+RG+++VC +LL FGA P + TP+++A +SGH+ L
Sbjct: 268 GFTALHAAAVEGQALAALWLCQAGADVTALKDDGWQDTALHYAAARGHTEVCKVLLAFGA----------PVEAKNYAGLTPAKIAARSGHSRL 351 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119710.4062.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig119710.4062.1 >prot_M-pyrifera_M_contig119710.4062.1 ID=prot_M-pyrifera_M_contig119710.4062.1|Name=mRNA_M-pyrifera_M_contig119710.4062.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp NGLNLLHAASISGDAKLVEALLEAGSDPNAKTNTGYTPLVFAASRGNSDVback to top mRNA from alignment at M-pyrifera_M_contig119710:2..307+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig119710.4062.1 ID=mRNA_M-pyrifera_M_contig119710.4062.1|Name=mRNA_M-pyrifera_M_contig119710.4062.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=306bp|location=Sequence derived from alignment at M-pyrifera_M_contig119710:2..307+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig119710:2..307+ >mRNA_M-pyrifera_M_contig119710.4062.1 ID=mRNA_M-pyrifera_M_contig119710.4062.1|Name=mRNA_M-pyrifera_M_contig119710.4062.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=612bp|location=Sequence derived from alignment at M-pyrifera_M_contig119710:2..307+ (Macrocystis pyrifera P11B4 male)back to top |