prot_M-pyrifera_M_contig119674.4056.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119674.4056.1
Unique Nameprot_M-pyrifera_M_contig119674.4056.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length180
Homology
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A831U9G5_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A831U9G5_9BACT)

HSP 1 Score: 207 bits (526), Expect = 2.860e-63
Identity = 101/178 (56.74%), Postives = 131/178 (73.60%), Query Frame = 0
Query:    2 YPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRF 179
            YP+S LFD VI  QY IGDR+ ++GE N  K     WR F+K+PF++A++VY MVIDNQPFT+ AAEAQYK+GLC  +  +Y+ A++EY+RV+EDY+ S+W DDASYGLA CYYE+S+ + YDQ PS LA+ A+D F  +YP D R  E+   R EM E +A QRLQ A FY+KRR F
Sbjct:  113 YPESDLFDRVIELQYAIGDRYHKKGEANAKK----RWRLFRKKPFKKAIEVYTMVIDNQPFTDAAAEAQYKVGLCQASRGDYLAAAYEYRRVIEDYSSSDWVDDASYGLAQCYYEASLPSQYDQTPSALAVRAMDEFLQRYPEDQRSGEIAEKRVEMRETIAAQRLQIAHFYKKRRDF 286          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A847GH91_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Hydrogenedens sp. TaxID=2654184 RepID=A0A847GH91_9BACT)

HSP 1 Score: 203 bits (517), Expect = 2.310e-62
Identity = 104/178 (58.43%), Postives = 134/178 (75.28%), Query Frame = 0
Query:    2 YPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRF 179
            YPD+  + D I KQYEIGDR++++G   + K   L    FKKRP +RA +VY MV++NQPFT EAAEAQYKIGL H+  +EY+E++FEY+RVVEDYA S++ D+AS+GLAMCYY++S+   YDQAPS LA++A+D F  +YP D R AEL   R EM E +A QRL TA+FYEKRR F
Sbjct:   76 YPDTKRYGDAIKKQYEIGDRYYDQGLQRIDKRFAL----FKKRPLKRAAEVYAMVVENQPFTAEAAEAQYKIGLSHYARKEYIESAFEYRRVVEDYAGSDFVDEASFGLAMCYYKASLPPAYDQAPSQLAVDAVDEFKARYPQDERNAELVGKRAEMRESMAAQRLATARFYEKRRDF 249          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A7V3DGR3_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V3DGR3_9BACT)

HSP 1 Score: 200 bits (508), Expect = 1.740e-60
Identity = 102/179 (56.98%), Postives = 131/179 (73.18%), Query Frame = 0
Query:    2 YPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRFK 180
            Y  + L+D VI KQYEIGD+ +  G+  + K+ L     FKKRPFR+A++VY+MVI+NQPFT  AAEAQYKIGLC  T ++Y EA+FEY+RV+EDY+ SEW D+A YGLA CY+ES+    YDQ PS LA+EAID F  +YP D R ++L   R  M ER+A Q L+TA++YEKRR FK
Sbjct:  113 YAGTSLYDKVIEKQYEIGDKLYALGQAKIKKNFL---HFFKKRPFRKAIEVYSMVINNQPFTEAAAEAQYKIGLCRHTRKDYTEAAFEYKRVIEDYSTSEWVDEACYGLAECYFESAHGPQYDQGPSKLAVEAIDDFKRRYPDDERNSKLDEKRAVMRERIAAQHLETAKYYEKRREFK 288          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A7C2WLR7_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C2WLR7_9BACT)

HSP 1 Score: 188 bits (478), Expect = 8.180e-56
Identity = 97/168 (57.74%), Postives = 121/168 (72.02%), Query Frame = 0
Query:   12 IAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRF 179
            IA QYEIGD  +E+G     K     W P +KRP +RA+ VY+MVI+NQPFT EAAEAQYK+GLCH+  +EYVEA+FEY+RV+EDY  SEW  DA +GLAM YY++S   DYDQ PS LA+  ID F  +YPAD R  +L  IR E+ E++A QRL+ AQF+ KRR F
Sbjct:  138 IALQYEIGDSLYEKG----LKRQNRWWIPLRKRPLKRAIQVYSMVIENQPFTLEAAEAQYKLGLCHYARKEYVEAAFEYRRVIEDYGSSEWVGDACHGLAMSYYKASYPPDYDQTPSELAVRTIDDFFARYPADERVGDLQEIRREVREKIAQQRLKVAQFHVKRREF 301          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A7Y5C6K3_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5C6K3_9BACT)

HSP 1 Score: 180 bits (456), Expect = 8.710e-53
Identity = 98/179 (54.75%), Postives = 119/179 (66.48%), Query Frame = 0
Query:    1 VYPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRF 179
            VYPDS LFD VIAKQYEIGD F++RG  NL K     W PF+KRPFRRA+ VY MVIDNQPFT+ AA+AQYK+GLCH+TLEEY                                + S    YDQ+PSLLA++A+D F  K+P D+R AEL +I+TEM+ RVA QRL+TA+FYEKRR+F
Sbjct:  112 VYPDSDLFDQVIAKQYEIGDHFYDRGTANLNKGW---WHPFRKRPFRRAITVYAMVIDNQPFTDSAAQAQYKVGLCHYTLEEYRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKDSRPPAYDQSPSLLAVDAVDNFKRKFPDDSRVAELDSIKTEMLNRVAEQRLRTAKFYEKRRKF 287          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A7C3X4G0_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C3X4G0_9BACT)

HSP 1 Score: 177 bits (449), Expect = 1.090e-51
Identity = 88/178 (49.44%), Postives = 127/178 (71.35%), Query Frame = 0
Query:    2 YPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRF 179
            YP+S L++  I KQ+EIGD+ +ERG    +K   L++  F+ +P + A++VY MV+ NQPF   +AEAQYKIGLCH   +EY+EA +EY+RV+++Y QS+W DDA +GLA CYYESS+  +YDQ+ + LA+EAID F   +P D+R  EL   R +M + +A Q+L  A++YEK+R F
Sbjct:  111 YPNSKLYEQAIQKQFEIGDKLYERGLKKRSK--FLSF--FRGKPLKHAIEVYGMVVSNQPFMPRSAEAQYKIGLCHHARKEYIEAGYEYRRVIDNYPQSDWVDDARFGLARCYYESSLPPEYDQSRAELAIEAIDEFIKNFPEDSRVEELKGWRQKMRDNIAEQKLSVARYYEKKRNF 284          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A7C1CLF8_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C1CLF8_9BACT)

HSP 1 Score: 152 bits (384), Expect = 5.680e-42
Identity = 84/178 (47.19%), Postives = 109/178 (61.24%), Query Frame = 0
Query:    2 YPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRF 179
            +PD+  + D IAKQYE+GDR++E G     + S   +R FKKRPF+RA +VY MV+DNQPF  EAAEAQYKIGLCH+  ++Y++A+F                           ++S+   YDQAPS L +EAID F  +YP D R AEL   R EM E +A QRL  A+FYE+RR F
Sbjct:  110 HPDTNRYHDAIAKQYEVGDRYYELG----VRKSTQRFRLFKKRPFKRAAEVYTMVVDNQPFAPEAAEAQYKIGLCHYARKQYIDAAFXXXXXXXXXXXXXXXXXXXXXXXXXXXKASLPPAYDQAPSALTVEAIDDFMAQYPQDERTAELQEKRREMRESIALQRLDIARFYERRREF 283          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A1V5YZ30_9BACT (Tol-pal system protein YbgF n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YZ30_9BACT)

HSP 1 Score: 125 bits (313), Expect = 1.870e-31
Identity = 73/178 (41.01%), Postives = 93/178 (52.25%), Query Frame = 0
Query:    2 YPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEKRRRF 179
            YP S  +D  I  QYE+GDRF+ RGE    K     +R FKK+P++RA D+Y MV++NQPF  EAAEAQYKIGLCHF                                    Y+ S S  YDQ PS L + AID F   +P D +  +L  +R EM   +A   L +A+FYE+RR F
Sbjct:  110 YPGSDKYDAAIKMQYELGDRFYARGEALAGKK----FRFFKKKPYKRAADIYAMVVENQPFAAEAAEAQYKIGLCHFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYKDSYSPAYDQTPSELTVNAIDDFKANFPGDEKNEKLGEMRIEMRNSIAQHYLNSAKFYERRREF 283          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A3A4NVK8_9BACT (Outer membrane protein assembly factor BamD n=1 Tax=Candidatus Abyssubacteria bacterium SURF_5 TaxID=2093360 RepID=A0A3A4NVK8_9BACT)

HSP 1 Score: 102 bits (254), Expect = 6.410e-23
Identity = 62/169 (36.69%), Postives = 94/169 (55.62%), Query Frame = 0
Query:    5 SPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFY 173
            S LF  V+ KQ +I DRFFE G     ++  +    F+   F +A+++Y  VI+NQPFT+ +AEAQY+IGLC+  LE Y EAS E+Q+V++ Y  S W+ +A+Y  A      ++  +YD+     A+   +TF   YP  +R  E      E++E  A    Q   +Y
Sbjct:  119 SQLFGHVLEKQRKIADRFFELGVER--EEGFIL---FRGSNFDKAIEIYRKVINNQPFTDFSAEAQYRIGLCYMKLELYEEASVEFQKVLDFYPASSWSAEAAYACADSQACQALPHEYDKTAVEKAVSKYETFLRMYPESSRIEEAQEHMRELLETAARHEYQIGMYY 282          
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Match: A0A1J4VRE8_9BACT (YfiO domain-containing protein n=1 Tax=Candidatus Omnitrophica bacterium CG1_02_49_10 TaxID=1805289 RepID=A0A1J4VRE8_9BACT)

HSP 1 Score: 90.9 bits (224), Expect = 1.320e-18
Identity = 54/175 (30.86%), Postives = 97/175 (55.43%), Query Frame = 0
Query:    1 VYPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAVDVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQSEWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAELTTIRTEMVERVATQRLQTAQFYEK 175
            +YP+S  FD+VI ++YEIGDR     +  +A  +L +           AV+V+  V +N P+     +AQYK+ + +  + E+ +A   +++V+ DY +S+ ADDA   LA+  +++S +A Y++  +  A+   D F  KYP  +   +      E++E+ A    ++AQFYE+
Sbjct:  113 IYPNSEYFDEVIKREYEIGDRMLTEDKRKIAGLALFSAAD-------TAVEVFKKVAENAPYGAYGDKAQYKLAVAYTKMYEWEQARDAFEKVITDYPESDLADDAKLQLAVISFKASKNASYEKEATDEALNEYDEFLKKYPESSERDKAEGAIGELLEKKAESSYKSAQFYER 280          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119674.4056.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A831U9G5_9BACT2.860e-6356.74Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A847GH91_9BACT2.310e-6258.43Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A7V3DGR3_9BACT1.740e-6056.98Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A7C2WLR7_9BACT8.180e-5657.74Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A7Y5C6K3_9BACT8.710e-5354.75Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A7C3X4G0_9BACT1.090e-5149.44Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A7C1CLF8_9BACT5.680e-4247.19Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A1V5YZ30_9BACT1.870e-3141.01Tol-pal system protein YbgF n=1 Tax=Candidatus Hyd... [more]
A0A3A4NVK8_9BACT6.410e-2336.69Outer membrane protein assembly factor BamD n=1 Ta... [more]
A0A1J4VRE8_9BACT1.320e-1830.86YfiO domain-containing protein n=1 Tax=Candidatus ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 12..180
e-value: 3.7E-26
score: 94.5
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 35..126
IPR039565Outer membrane lipoprotein BamD-likePFAMPF13525YfiOcoord: 42..179
e-value: 3.1E-9
score: 36.8
NoneNo IPR availablePANTHERPTHR37423:SF1OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMDcoord: 41..179
NoneNo IPR availablePANTHERPTHR37423FAMILY NOT NAMEDcoord: 41..179

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119674contigM-pyrifera_M_contig119674:2..541 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119674.4056.1mRNA_M-pyrifera_M_contig119674.4056.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119674 2..541 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119674.4056.1 ID=prot_M-pyrifera_M_contig119674.4056.1|Name=mRNA_M-pyrifera_M_contig119674.4056.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=180bp
VYPDSPLFDDVIAKQYEIGDRFFERGETNLAKDSLLAWRPFKKRPFRRAV
DVYNMVIDNQPFTNEAAEAQYKIGLCHFTLEEYVEASFEYQRVVEDYAQS
EWADDASYGLAMCYYESSMSADYDQAPSLLAMEAIDTFAVKYPADARGAE
LTTIRTEMVERVATQRLQTAQFYEKRRRFK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR039565BamD-like