mRNA_M-pyrifera_M_contig119615.4044.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig119615.4044.1
Unique NamemRNA_M-pyrifera_M_contig119615.4044.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A7S4M8X2_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M8X2_9EUKA)

HSP 1 Score: 90.9 bits (224), Expect = 5.900e-21
Identity = 48/113 (42.48%), Postives = 66/113 (58.41%), Query Frame = 1
Query:   28 WNAELIREVLFDRDHVFEKLDFGIVTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMIASIVEQESDLGDVGIHTWTTKATVEVIGRAGFGHTFHALK 366
            W+ EL + VLF  D    K DFG     LVG SILQ  GE+WK+QK +L PAF  +HI++L P    +  ++     E     G V +++W  +AT++ IGR GFG  FHAL+
Sbjct:    3 WDPELGKSVLFASDDDLIKGDFGDFQNRLVGASILQATGEDWKQQKHVLSPAFKWNHIQALFPQFVDIVGQLSCKWRELS---GPVDVYSWLHRATLDAIGRGGFGFDFHALE 112          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A6U1W3V7_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A6U1W3V7_9EUKA)

HSP 1 Score: 87.0 bits (214), Expect = 2.000e-17
Identity = 50/124 (40.32%), Postives = 70/124 (56.45%), Query Frame = 1
Query:   16 MINIWNAELIREVLFDRDHVFEKLDFGI-VTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPA-MDSVGDEMIASIVEQESDLGDVGIHTWTTKATVEVIGRAGFGHTFHALKPEAKE 381
            +I  W+ E+ + +LF +D    K +FG  + +  +G SILQ  GE+WKR K +L PAF   HI+SLLP  +D VG   +A   E  +    V +      AT++ IGRAGFG  F A+  EA E
Sbjct:   94 VIYTWDPEISKNILFAKDDEIGKSNFGAELMDRFLGDSILQTSGEQWKRHKDVLSPAFQWKHIQSLLPHFIDLVG--KLADTWENSNGTAQVDVSKMIKYATLDAIGRAGFGFDFKAVSGEASE 215          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A6G1MB16_ORBOL (Uncharacterized protein n=5 Tax=Orbilia oligospora TaxID=2813651 RepID=A0A6G1MB16_ORBOL)

HSP 1 Score: 76.6 bits (187), Expect = 9.260e-14
Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   37 ELIREVLFDRDHVFEKLDFGIVTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMIASIVE--QESDLGD--VGIHTWTTKATVEVIGRAGFGHTFHALK 366
            +++ EVL  + ++F K  F   +  L+G  IL   G+E KRQ++IL PAFH  H+RSL P   S   EM+  I    Q SD  D  +  ++W ++ T+++IG+AG G  F+A+K
Sbjct:  122 KVLAEVLNSQSYIFIKPQFFRFSLRLLGNGILMAEGDEHKRQRKILTPAFHPRHLRSLFPLFWSKTQEMVDLITAEIQSSDAPDPIINFNSWGSRCTLDIIGKAGAGIDFNAMK 235          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A437AFB6_9PEZI (Uncharacterized protein n=1 Tax=Arthrobotrys flagrans TaxID=97331 RepID=A0A437AFB6_9PEZI)

HSP 1 Score: 75.5 bits (184), Expect = 2.350e-13
Identity = 44/114 (38.60%), Postives = 68/114 (59.65%), Query Frame = 1
Query:   37 ELIREVLFDRDHVFEKLDFGIVTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMIASIVE--QESDLGD--VGIHTWTTKATVEVIGRAGFGHTFHALK 366
            +++ EVL  + ++F K  F   +  L+G  IL   G+E KRQ++IL PAFH  H+RSL P   S   EM+  I    Q SD  D  +  ++W ++ T+++IG+AG G  F+A+K
Sbjct:  122 KVLAEVLNSQSYIFVKPQFFRFSLRLLGNGILMAEGDEHKRQRKILTPAFHPRHLRSLFPLFWSKTREMVDLITAEIQASDAPDPIIDFNSWGSRCTLDIIGKAGAGIDFNAMK 235          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A8H5B026_9AGAR (Uncharacterized protein n=1 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H5B026_9AGAR)

HSP 1 Score: 75.1 bits (183), Expect = 3.470e-13
Identity = 38/124 (30.65%), Postives = 77/124 (62.10%), Query Frame = 1
Query:   16 MINIWNAELIREVLFDRDHVFEK-LDFGIVTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMIASIVEQESDLGD-VGIHTWTTKATVEVIGRAGFGHTFHALKPEAKE 381
            +I +++ + +  +L    H+FE+  DF +  + + G+ ++ V G++ +RQ++IL PAF   H+R + P    +  ++  SI +Q S   + + I +W T+A +E+IG++GFG++F +L+ +A E
Sbjct:  627 LIYVYDPKALHHILIKDTHIFEEGSDFLLTNKTVWGKGLVAVVGDDHRRQRKILNPAFSIKHMREMTPTFYGIVHKLRDSITKQVSQGEEKIDILSWMTRAALELIGQSGFGYSFDSLEHDAPE 750          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A8H6M3X4_9AGAR (Cytochrome P450 n=3 Tax=Tulosesus angulatus TaxID=980116 RepID=A0A8H6M3X4_9AGAR)

HSP 1 Score: 72.4 bits (176), Expect = 2.850e-12
Identity = 37/124 (29.84%), Postives = 75/124 (60.48%), Query Frame = 1
Query:   16 MINIWNAELIREVLFDRDHVFEK-LDFGIVTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMIASIVEQESDLGD-VGIHTWTTKATVEVIGRAGFGHTFHALKPEAKE 381
            +I +++ + +  +L    H+FE+  DF +  + + G+ ++ V G++ +RQ++IL PAF   H+R + P    +  ++  SI +Q S   + + I +W T+  +E+IG++GFG++F  L+ +A E
Sbjct:   80 LIYVYDPKALHHILIKDTHIFEEGSDFLLTNKTVWGKGLVAVVGDDHRRQRKILNPAFSIKHMREMTPTFYGIVHKLRDSITKQVSQGEEKIDILSWMTRTALELIGQSGFGYSFDNLEHDAPE 203          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A0K6G2Q3_9AGAM (Bifunctional P-450/NADPH-P450 reductase n=1 Tax=Rhizoctonia solani TaxID=456999 RepID=A0A0K6G2Q3_9AGAM)

HSP 1 Score: 72.0 bits (175), Expect = 4.080e-12
Identity = 46/135 (34.07%), Postives = 73/135 (54.07%), Query Frame = 1
Query:    1 FAGMYMINIWNAELIREVL-----FDRDHVFEKLDFGIVTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMIASIVEQESDLGD---VGIHTWTTKATVEVIGRAGFGHTFHALKPEAKE 381
            F G Y + IW+   +  VL     F +  + ++   GIV    +G+ IL    E  KRQ++I+ PAF   HIR+LLP   +  +++    VE   D  +   + I  W T+AT+++IG AGFG+ F +L+ E K+
Sbjct:   88 FCGEYHLCIWDMRAVNHVLTHNTTFIKSEI-QRRSLGIV----LGEGILSADEETHKRQRRIMNPAFGALHIRNLLPTFATKANQLRDIWVEMLRDNPEGETIDILPWLTRATLDIIGLAGFGYDFRSLEDEDKD 217          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: J4HTH8_9APHY (Uncharacterized protein n=1 Tax=Fibroporia radiculosa TaxID=599839 RepID=J4HTH8_9APHY)

HSP 1 Score: 71.6 bits (174), Expect = 5.260e-12
Identity = 39/126 (30.95%), Postives = 72/126 (57.14%), Query Frame = 1
Query:    7 GMY---MINIWNAELIREVLFDRDHVFEKLDFGIVTEPLV-GQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEM---IASIVEQESDLGDVGIHTWTTKATVEVIGRAGFGHTFHAL 363
            GM+   ++ + +   +  ++   +H+FEK D+ +    L+ G  +L V G + ++Q+++L P F  +H+R ++P    VG E+   +A  V Q  D  ++ +  W  +A VE+IGRAG GH+F +L
Sbjct:   75 GMFKRPILYVSDPRALHTIVAKEEHIFEKADWFLTLNTLLFGPGLLSVSGNQHRKQRRMLNPVFSVNHLRRMMPIFYQVGHELRDALAGRVYQ--DPTELDVLDWCGRAAVEIIGRAGLGHSFRSL 198          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: S8ADL0_DACHA (Uncharacterized protein n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8ADL0_DACHA)

HSP 1 Score: 68.2 bits (165), Expect = 8.530e-11
Identity = 42/124 (33.87%), Postives = 69/124 (55.65%), Query Frame = 1
Query:   31 NAELIREVLFDRDHVFEK---LDFGIVTEPLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMI----ASIVEQESDLGDVGIHTWTTKATVEVIGRAGFGHTFHALK-PEAK 378
            N +L+ E+L  + + F K     F +    L+G  IL   G+E KRQ++IL PAFH  H+RSL P   +   EM+      IV+ + D   +  ++W ++ T+++IG A  G  F+A+  P++K
Sbjct:  120 NPKLLAEILTTKSYTFTKPRLFQFSLAR--LLGNGILMAEGDEHKRQRKILIPAFHPRHLRSLFPLFFTKSQEMVELITGEIVKAQVDDPIIDFNSWGSRLTLDIIGIAAAGIEFNAMTDPDSK 241          
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Match: A0A6A6WAI5_9PEZI (Cytochrome P450 n=1 Tax=Pseudovirgaria hyperparasitica TaxID=470096 RepID=A0A6A6WAI5_9PEZI)

HSP 1 Score: 67.8 bits (164), Expect = 1.160e-10
Identity = 33/86 (38.37%), Postives = 51/86 (59.30%), Query Frame = 1
Query:  109 PLVGQSILQVGGEEWKRQKQILGPAFHHDHIRSLLPAMDSVGDEMI-ASIVEQESDLGDVGIHTWTTKATVEVIGRAGFGHTFHAL 363
            P++G  +L   GEE KRQ++ L PAFH+ HI+ L P        M  A  ++ +     V +  W T+AT+++IG AGFG +F+A+
Sbjct:  144 PILGIGVLLAEGEEHKRQRKALMPAFHYRHIKDLYPVFWEHSKRMADAMAIDMKESQSKVLVSDWVTRATLDIIGAAGFGQSFNAI 229          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119615.4044.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4M8X2_9EUKA5.900e-2142.48Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A6U1W3V7_9EUKA2.000e-1740.32Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A6G1MB16_ORBOL9.260e-1438.60Uncharacterized protein n=5 Tax=Orbilia oligospora... [more]
A0A437AFB6_9PEZI2.350e-1338.60Uncharacterized protein n=1 Tax=Arthrobotrys flagr... [more]
A0A8H5B026_9AGAR3.470e-1330.65Uncharacterized protein n=1 Tax=Tulosesus angulatu... [more]
A0A8H6M3X4_9AGAR2.850e-1229.84Cytochrome P450 n=3 Tax=Tulosesus angulatus TaxID=... [more]
A0A0K6G2Q3_9AGAM4.080e-1234.07Bifunctional P-450/NADPH-P450 reductase n=1 Tax=Rh... [more]
J4HTH8_9APHY5.260e-1230.95Uncharacterized protein n=1 Tax=Fibroporia radicul... [more]
S8ADL0_DACHA8.530e-1133.87Uncharacterized protein n=1 Tax=Dactylellina hapto... [more]
A0A6A6WAI5_9PEZI1.160e-1038.37Cytochrome P450 n=1 Tax=Pseudovirgaria hyperparasi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119615contigM-pyrifera_M_contig119615:71..457 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score79.0
Seed ortholog evalue1.8e-12
Seed eggNOG ortholog13349.G1XSE0
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Cytochrome p-450
EggNOG OGs38BG9@33154,3NXAM@4751,3QNMZ@4890,COG2124@1,KOG0157@2759
COG Functional cat.IQ
Best tax levelAscomycota
Best eggNOG OGNA|NA|NA
Exons1
Model size387
Cds size378
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815715.915152-CDS-M-pyrifera_M_contig119615:70..4481622815715.915152-CDS-M-pyrifera_M_contig119615:70..448Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119615 71..448 -
1692277535.6699758-CDS-M-pyrifera_M_contig119615:70..4481692277535.6699758-CDS-M-pyrifera_M_contig119615:70..448Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig119615 71..448 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815715.9271495-UTR-M-pyrifera_M_contig119615:448..4571622815715.9271495-UTR-M-pyrifera_M_contig119615:448..457Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig119615 449..457 -
1692277535.6797523-UTR-M-pyrifera_M_contig119615:448..4571692277535.6797523-UTR-M-pyrifera_M_contig119615:448..457Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig119615 449..457 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119615.4044.1prot_M-pyrifera_M_contig119615.4044.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig119615 71..448 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig119615.4044.1

>prot_M-pyrifera_M_contig119615.4044.1 ID=prot_M-pyrifera_M_contig119615.4044.1|Name=mRNA_M-pyrifera_M_contig119615.4044.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
MYMINIWNAELIREVLFDRDHVFEKLDFGIVTEPLVGQSILQVGGEEWKR
QKQILGPAFHHDHIRSLLPAMDSVGDEMIASIVEQESDLGDVGIHTWTTK
ATVEVIGRAGFGHTFHALKPEAKEGE
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mRNA from alignment at M-pyrifera_M_contig119615:71..457-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig119615.4044.1 ID=mRNA_M-pyrifera_M_contig119615.4044.1|Name=mRNA_M-pyrifera_M_contig119615.4044.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=387bp|location=Sequence derived from alignment at M-pyrifera_M_contig119615:71..457- (Macrocystis pyrifera P11B4 male)
TTCGCCGGCATGTACATGATCAATATCTGGAATGCCGAGCTCATCAGGGA GGTGCTCTTTGACAGAGACCACGTATTCGAGAAGCTCGATTTCGGGATTG TCACCGAGCCACTGGTGGGGCAGTCCATCCTTCAAGTGGGTGGCGAGGAA TGGAAGAGGCAGAAGCAGATTCTTGGGCCTGCCTTCCACCACGACCACAT TCGCTCTCTGCTCCCAGCCATGGATTCGGTTGGCGACGAGATGATCGCGA GCATTGTTGAGCAGGAGAGCGATCTCGGAGATGTGGGCATTCACACGTGG ACTACGAAGGCCACAGTGGAGGTGATTGGAAGGGCGGGCTTTGGCCACAC TTTCCACGCACTGAAGCCCGAGGCAAAGGAAGGAGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig119615:71..457-

>mRNA_M-pyrifera_M_contig119615.4044.1 ID=mRNA_M-pyrifera_M_contig119615.4044.1|Name=mRNA_M-pyrifera_M_contig119615.4044.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=756bp|location=Sequence derived from alignment at M-pyrifera_M_contig119615:71..457- (Macrocystis pyrifera P11B4 male)
ATGTACATGATCAATATCTGGAATGCCGAGCTCATCAGGGAGGTGCTCTT
TGACAGAGACCACGTATTCGAGAAGCTCGATTTCGGGATTGTCACCGAGC
CACTGGTGGGGCAGTCCATCCTTCAAGTGGGTGGCGAGGAATGGAAGAGG
CAGAAGCAGATTCTTGGGCCTGCCTTCCACCACGACCACATTCGCTCTCT
GCTCCCAGCCATGGATTCGGTTGGCGACGAGATGATCGCGAGCATTGTTG
AGCAGGAGAGCGATCTCGGAGATGTGGGCATTCACACGTGGACTACGAAG
GCCACAGTGGAGGTGATTGGAAGGGCGGGCTTTGGCCACACTTTCCACGC
ACTGAAGCCCGAGGCAAAGGAAGGAGAGATGTACATGATCAATATCTGGA
ATGCCGAGCTCATCAGGGAGGTGCTCTTTGACAGAGACCACGTATTCGAG
AAGCTCGATTTCGGGATTGTCACCGAGCCACTGGTGGGGCAGTCCATCCT
TCAAGTGGGTGGCGAGGAATGGAAGAGGCAGAAGCAGATTCTTGGGCCTG
CCTTCCACCACGACCACATTCGCTCTCTGCTCCCAGCCATGGATTCGGTT
GGCGACGAGATGATCGCGAGCATTGTTGAGCAGGAGAGCGATCTCGGAGA
TGTGGGCATTCACACGTGGACTACGAAGGCCACAGTGGAGGTGATTGGAA
GGGCGGGCTTTGGCCACACTTTCCACGCACTGAAGCCCGAGGCAAAGGAA
GGAGAG
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