mRNA_M-pyrifera_M_contig1195.4031.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig1195.4031.1
Unique NamemRNA_M-pyrifera_M_contig1195.4031.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: D7FSK5_ECTSI (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK5_ECTSI)

HSP 1 Score: 248 bits (634), Expect = 7.370e-82
Identity = 125/172 (72.67%), Postives = 143/172 (83.14%), Query Frame = 1
Query:    1 MGKHVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVDEEVCAARD 516
            MGKHVFVTVGTTKF+SL+ AV++  VLS+L SKG+TSLT QIGHG HVP+F     +  ++CRWYRFK TL EDM+ AD V++HAGAGSVMEALGLGK +V VVN +LMDNHQEELADALA RNYL ATTP  LA  LVELDDSPSAR PYPPA+PE FAAIVDEE+ AA+D
Sbjct:    1 MGKHVFVTVGTTKFDSLVQAVDNAVVLSSLCSKGFTSLTVQIGHGQHVPSFPVDQTA--LDCRWYRFKQTLHEDMARADVVVSHAGAGSVMEALGLGKALVVVVNRALMDNHQEELADALAQRNYLRATTPEGLAGALVELDDSPSARRPYPPAKPEAFAAIVDEEMRAAQD 170          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: A0A7R9TAB8_9VIRI (Hypothetical protein n=1 Tax=Prasinoderma coloniale TaxID=156133 RepID=A0A7R9TAB8_9VIRI)

HSP 1 Score: 145 bits (365), Expect = 7.760e-41
Identity = 85/173 (49.13%), Postives = 106/173 (61.27%), Query Frame = 1
Query:    1 MGKHVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEI---ECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVDEEVCAA 510
            MG  VFVTVGTT F++LI+AV+  E    L+ +GYTS T QIG G++ P   T P    +      +YRFK +L EDM+ A  V++HAG+GS+ EAL L K +V VVN +LMDNHQ+ELA ALA R YL++TTP  L   L  LD S  A  PYP   P   A  V   V  A
Sbjct:   16 MGGSVFVTVGTTSFDALISAVDRAETARALAERGYTSATLQIGRGEYEP-HETCPACTGVPGFSVDYYRFKGSLAEDMASASLVVSHAGSGSIFEALALKKPLVVVVNEALMDNHQQELAGALASRGYLVSTTPARLVSALETLDTS--ALKPYPGGDPAAVAQAVSGIVALA 185          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: A0A3R7KHJ4_9STRA (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7KHJ4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 3.390e-40
Identity = 79/169 (46.75%), Postives = 107/169 (63.31%), Query Frame = 1
Query:   10 HVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVDEEVCAARD 516
            H FVTVGTTKF +LI A++    LS L ++G+ SL  QIGHGDH+P  +       +E  +YR  P  ++D++ AD +I+HAGAGS+M+AL L KT+V VVNT LMDNHQ ELA+A+A +NY L T+   L  VL E  D  + + PYP    + F  +VD  +    D
Sbjct:    2 HAFVTVGTTKFEALIEALDTDACLSALVARGFNSLRLQIGHGDHIPRMSFPG----LELSYYRHDPQYKQDVNRADLIISHAGAGSIMDALALKKTLVVVVNTQLMDNHQTELAEAMAEQNYCLQTSVQGLEDVL-ETGDWSNLQ-PYPQPHEQAFPDLVDTVMGLVED 164          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: UPI000359DB7A (UDP-N-acetylglucosamine transferase subunit ALG13 homolog n=1 Tax=Aplysia californica TaxID=6500 RepID=UPI000359DB7A)

HSP 1 Score: 141 bits (356), Expect = 1.140e-39
Identity = 76/166 (45.78%), Postives = 106/166 (63.86%), Query Frame = 1
Query:    1 MGKHVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGE--IECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVD 492
            MGK +FVTVGTT+F+SLI  +   E L TL++ GY+ LTAQIG G++ P+ +T+  +G   +   W+R K ++++D++ +D V++HAGAGSVM+ LGLGK V+ VVN  LM NHQ ELA  LA   +L      +L   L  LD S    TP+PP  P   A  +D
Sbjct:    1 MGKTIFVTVGTTQFDSLIKKITSEEALETLAALGYSQLTAQIGRGEYEPSESTSRTNGHPAVSVSWFRLKASIEDDIAASDLVVSHAGAGSVMDCLGLGKPVLVVVNEELMGNHQTELAHKLAKDGHLHFCGVKDLVVSLKSLDWS--CLTPFPPGEPAKVARFLD 164          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: A0A2R5GZU5_9STRA (UDP-N-acetylglucosamine transferase subunit ALG13-like n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GZU5_9STRA)

HSP 1 Score: 142 bits (358), Expect = 1.150e-39
Identity = 79/180 (43.89%), Postives = 109/180 (60.56%), Query Frame = 1
Query:    7 KHVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIE-------------CRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVDEEVCA 507
            K VFVTVGTT F++L+ A++D  V+  L  +G+TSLT QIG G +VP    A + G  E             CR+YRFK TL+ DM  A  +++HAGAGS+ME+L L K +V VVN  LMDNHQEELA+A+  +  L  T P ++  +L + D        YPP    +F A++D+E+ A
Sbjct:   15 KPVFVTVGTTSFDALVEALDDESVVQALRQRGFTSLTIQIGRGTYVPKRIGAVEEGSAEAATQPAASATFFPCRYYRFKSTLENDMKSAALIVSHAGAGSIMESLRLKKPLVVVVNEDLMDNHQEELAEAMEAKGVLRKTRPADVVALLGDADLDHFEV--YPPRDAGLFPALLDQEMYA 192          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: D0MVB2_PHYIT (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=2 Tax=Phytophthora infestans TaxID=4787 RepID=D0MVB2_PHYIT)

HSP 1 Score: 139 bits (349), Expect = 1.230e-38
Identity = 79/161 (49.07%), Postives = 108/161 (67.08%), Query Frame = 1
Query:   10 HVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVD 492
            + FVTVGTTKF++LIAA++    LS+L ++G+TSL  QIGHG+H P  AT P    +   +YR  P  + D++ AD +I+HAGAGS+M+ L L K ++ VVNTSLMDNHQ ELA+A+A +NY L TT   L  +L E  D  + + PYPP   + F  +VD
Sbjct:    2 NAFVTVGTTKFDALIAALDTDACLSSLVARGFTSLRMQIGHGEHQPR-ATFPG---LTLSFYRHDPQYKRDVAEADLIISHAGAGSIMDGLALKKKLLVVVNTSLMDNHQAELAEAMADQNYCLQTTVQGLQSML-EAGDWDNLQ-PYPPLDEQAFPDVVD 156          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: A0A662WVV2_9STRA (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WVV2_9STRA)

HSP 1 Score: 139 bits (349), Expect = 1.230e-38
Identity = 78/170 (45.88%), Postives = 109/170 (64.12%), Query Frame = 1
Query:   10 HVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVDEEVCAARDQ 519
             VFVTVGTTKF++L+ A++    L+ L ++G++ L  QIGHG+HVP  A+ P    +E  +YR     ++D++ AD VI+HAGAGS+M+AL  GKT++ VVNT+LMDNHQ ELA+A+A RNY L T+   L   L   D       PYP A  + F ++VD  V    D+
Sbjct:    2 EVFVTVGTTKFDALVRALDSDACLAALVARGFSRLRLQIGHGEHVPR-ASFPG---LELSYYRHDAGYKQDVARADLVISHAGAGSIMDALAAGKTLLVVVNTALMDNHQTELAEAMAGRNYCLQTSCDGLLATLESADWD--HLQPYPQADEQAFPSLVDSVVGVEADR 165          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: V9EYS7_PHYPR (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=11 Tax=Phytophthora TaxID=4783 RepID=V9EYS7_PHYPR)

HSP 1 Score: 138 bits (348), Expect = 1.740e-38
Identity = 80/161 (49.69%), Postives = 105/161 (65.22%), Query Frame = 1
Query:   10 HVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVD 492
            H FVTVGTTKF++LI A++    LS L ++G+TSL  QIGHG+H P  AT P    +   +YR  P  + D+S AD +I+HAGAGS+M+ L L K +V VVNT+LMDNHQ ELA+A+  + + LATT   L  VL E  D  S + PYPP   + F  +VD
Sbjct:    2 HAFVTVGTTKFDALIVALDTDACLSALVARGFTSLRMQIGHGEHQPR-ATFPG---LTLSFYRHDPQYKRDVSEADLIISHAGAGSIMDGLALKKMLVVVVNTALMDNHQAELAEAMVDQKFCLATTVQGLHSVL-ETGDWNSLQ-PYPPLDEQAFPDLVD 156          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: A0A835ZKP1_9STRA (Glycosyltransferase family 28 C-terminal domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZKP1_9STRA)

HSP 1 Score: 139 bits (350), Expect = 3.350e-38
Identity = 85/171 (49.71%), Postives = 105/171 (61.40%), Query Frame = 1
Query:    7 KHVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPA-RPEVFAAIVDEEVCAARD 516
            K VFVTVGTT F+ LI A +  +VL  L   GY  +  Q G G + P          + C  YRFKPTL EDM+ AD +I+HAGAGS+MEAL L K +V VVN +LM NHQ ELA A+A R + LA TP  LAR L    D+ +A  PYPP  R + F  +++EEV  ARD
Sbjct:   50 KMVFVTVGTTLFDELIRAADQDDVLQRLWQLGYRRVLMQTGKGAYQPAEGDRRCGMHVSC--YRFKPTLAEDMARADLIISHAGAGSIMEALTLAKPLVVVVNDALMGNHQSELARAMAERCHALAATPPRLARALSA--DALAALRPYPPPPRADAFLLVLNEEV--ARD 214          
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Match: M4BYJ6_HYAAE (N-acetylglucosaminyldiphosphodolichol N-acetylglucosaminyltransferase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BYJ6_HYAAE)

HSP 1 Score: 137 bits (344), Expect = 7.000e-38
Identity = 76/169 (44.97%), Postives = 106/169 (62.72%), Query Frame = 1
Query:   10 HVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPTFATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTVVAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTPYPPARPEVFAAIVDEEVCAARD 516
            HVFVTVGTT+F++L+AA++    LS L  +G+TSL  QIGHG +VP     P    +E  +YR  P  + D++ AD V++HAGAGS+M++L L K +V VVN +LMDNHQ ELA+A+A RN+ L T+  EL  VL     + +   PYP      F  +VD  +   +D
Sbjct:    2 HVFVTVGTTRFDALVAALDTDACLSALVDRGFTSLRMQIGHGVYVPR----PSFPGLELSFYRHDPHYKNDVAKADLVVSHAGAGSIMDSLALRKKLVVVVNETLMDNHQTELAEAMAERNFCLQTSVDELPSVLAT--GNWTDLQPYPSPDESAFPDLVDAVMGVTQD 164          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1195.4031.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FSK5_ECTSI7.370e-8272.67N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
A0A7R9TAB8_9VIRI7.760e-4149.13Hypothetical protein n=1 Tax=Prasinoderma colonial... [more]
A0A3R7KHJ4_9STRA3.390e-4046.75N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
UPI000359DB7A1.140e-3945.78UDP-N-acetylglucosamine transferase subunit ALG13 ... [more]
A0A2R5GZU5_9STRA1.150e-3943.89UDP-N-acetylglucosamine transferase subunit ALG13-... [more]
D0MVB2_PHYIT1.230e-3849.07N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
A0A662WVV2_9STRA1.230e-3845.88N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
V9EYS7_PHYPR1.740e-3849.69N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]
A0A835ZKP1_9STRA3.350e-3849.71Glycosyltransferase family 28 C-terminal domain-co... [more]
M4BYJ6_HYAAE7.000e-3844.97N-acetylglucosaminyldiphosphodolichol N-acetylgluc... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1195contigM-pyrifera_M_contig1195:24103..27682 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score246.5
Seed ortholog evalue9.3e-63
Seed eggNOG ortholog2880.D7FSK5
Preferred nameALG13
KEGG koko:K07432,ko:K07441,ko:K10742,ko:K11855,ko:K20045
KEGG ReactionR05970
KEGG Pathwayko00510,ko00513,ko01100,ko03030,map00510,map00513,map01100,map03030
KEGG ModuleM00055
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004577,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005783,GO:0005789,GO:0005829,GO:0006464,GO:0006486,GO:0006487,GO:0006488,GO:0006490,GO:0006629,GO:0006807,GO:0008150,GO:0008152,GO:0008194,GO:0008375,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016740,GO:0016757,GO:0016758,GO:0019538,GO:0019898,GO:0031090,GO:0031312,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0042406,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0043541,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0070085,GO:0071704,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.Glycosyltransferase family 28 C-terminal domain
EggNOG OGsCOG5017@1,KOG3349@2759
Ec32 ortholog descriptionbeta(1,4)-N-acetylglucosaminyltransferase
Ec32 orthologEc-04_000330.1
EC2.4.1.141,3.4.19.12,3.6.4.12
COG Functional cat.T
CAZyGT1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko01002,ko01003,ko03032,ko04121,ko04131
Exons3
Model size534
Cds size534
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1195.4031.1prot_M-pyrifera_M_contig1195.4031.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig1195 24103..27682 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815715.2562017-CDS-M-pyrifera_M_contig1195:24102..243531622815715.2562017-CDS-M-pyrifera_M_contig1195:24102..24353Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1195 24103..24353 -
1692277535.3867204-CDS-M-pyrifera_M_contig1195:24102..243531692277535.3867204-CDS-M-pyrifera_M_contig1195:24102..24353Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1195 24103..24353 -
1622815715.2661977-CDS-M-pyrifera_M_contig1195:26871..269831622815715.2661977-CDS-M-pyrifera_M_contig1195:26871..26983Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1195 26872..26983 -
1692277535.4005265-CDS-M-pyrifera_M_contig1195:26871..269831692277535.4005265-CDS-M-pyrifera_M_contig1195:26871..26983Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1195 26872..26983 -
1622815715.276442-CDS-M-pyrifera_M_contig1195:27511..276821622815715.276442-CDS-M-pyrifera_M_contig1195:27511..27682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1195 27512..27682 -
1692277535.411942-CDS-M-pyrifera_M_contig1195:27511..276821692277535.411942-CDS-M-pyrifera_M_contig1195:27511..27682Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig1195 27512..27682 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig1195.4031.1

>prot_M-pyrifera_M_contig1195.4031.1 ID=prot_M-pyrifera_M_contig1195.4031.1|Name=mRNA_M-pyrifera_M_contig1195.4031.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=178bp
MGKHVFVTVGTTKFNSLIAAVEDPEVLSTLSSKGYTSLTAQIGHGDHVPT
FATAPQSGEIECRWYRFKPTLQEDMSLADTVITHAGAGSVMEALGLGKTV
VAVVNTSLMDNHQEELADALAMRNYLLATTPHELARVLVELDDSPSARTP
YPPARPEVFAAIVDEEVCAARDQEGRT*
back to top

mRNA from alignment at M-pyrifera_M_contig1195:24103..27682-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig1195.4031.1 ID=mRNA_M-pyrifera_M_contig1195.4031.1|Name=mRNA_M-pyrifera_M_contig1195.4031.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3580bp|location=Sequence derived from alignment at M-pyrifera_M_contig1195:24103..27682- (Macrocystis pyrifera P11B4 male)
ATGGGAAAGCACGTGTTCGTCACGGTGGGCACCACCAAGTTCAACTCCCT CATTGCAGCCGTCGAGGATCCTGAGGTTCTATCCACCTTGTCCTCCAAAG GCTACACGTCGCTCACCGCACAGATCGGCCATGGCGACCACGTGCCCACC TTCGCTACTGCTCCGCAATCGGTGAACAAAGCTCTTGCACCTTTTCGTCG TTACGTGCTACAACATGATGCCATCCACATCTCGTGTATGTACGTATCTC ATAGGCGTGGACTGGGTAATCCTTGTAACAAAGGTGTCAATGCGCGTAGG TTCTGGCACCAGGTACAGTACAGTAAGATTGTACGTTTAAATGACGATTA TGATACAATCGACAATCGCGCTCTCCCGAGCTTTTCTTCCGCTCTCCGGG CTGCTCCAGGCGGAAATTCCCTGCTTTGGGTCCTTTCCCCGTCGACGGGC TATTGATTGCGTAAGTAACTTCTTATATACAGTACAATAAGTATACGATA ACGTATGTATTATTTTACGTGATGTTCATGTTTACCAGTATCACGTACCA GGCACTTGGGATTAGTATTAATAGTACTACGTATCATATACCTGGTATGT GGAAATAATACTATTTTTATATTATTAATACGATGTACATGTACGAGTAC TTCTTCCCCGCTTCCCCCGTGTTTGTTTGTCTCTGATTTTGTTCTCAAGG GCGAAATCGAGTGCAGGTGGTACCGCTTCAAGCCGACCCTGCAGGAGGAC ATGTCGTTAGCCGATACGGTCATAACCCATGCCGGAGCCGGCTCCGTCAT GGAAGCGCTTGGTATGTGTTCCATGAAGAAAGTTAGTGGCAGAACATCCC CCCCGAGTCCCAATCGTTTTTTACGAAGACACCTCGCTGTGATGAGGTGG AGAATTTCGTTGAAATTCAACTTTTTGCAAGCTGCGTGAAACACTCGGAC ACTTGGACCGCGCGTGCTGTATCTGGTATGGGGTGTATACGGTACCAATG ACCTCCATGAAAGCTGTAGGATCTGCAAGCACTTCAGGCGAAGAACTTGC GAGAGACCCAGTCACTCACCACACGCTATGAGGTACCAAGTACGGTGCCA GGTATCATACCCGTATACGGTACCTGACAAGAGCAAGCGGAACACGGCAG AAGTTGGAAAGAGTGATGAGCATGCAACAGACGAATACATACGAACTGAT AAAATGGACCTCTGAGGGAAAATGCGCCTGGATCACGGACCAACAAAGAA AAAGCAAAACGGTGCTGCGTGTAGTACGTCGGGCACTTTATTCGCTGCGG CCAGGGTCTACTTCCAGTGGGCGTTGACCTGGTACCAGGTACCTTTCGCC CTTGTAGTTGTCTGTGTGTCCACGGTGACTGACCTGAGGCTCCTCGTGTT TCTTCAACGAAAGCATTAAAACAGTTTCCCTGATCAAGCACAAAATAACA GCCAACCCGGTGAGACCTCTGGATCTTTTCAAACCCTGGAACAGCGACCA GAACAATGACGATGGGTGTTGCCAGCCGTTCCAGCCGTTCCAGCCGTTCC AGCGTGAGCGCACAGAGCAATATGTTGCTGCGCGCGCGTGGCGTACATCT TCTTGCAGTCTATTCCTGGAGCACTCTGTGGTTCGGACACTGTTAATAGA CGAGACCCGGTAACCCCGGCTGCCTCGCGCGGTCGTTGCCATAACCATCG TTGACGTTCGTCACGTCATGTTCACTATTAAGTCCCTACAGAACTATAAT GATGGTATTAAGTCCCAATATAATTAATGGTAGTGAGTCCGATAAGGGTT GAATGGTATTCAGTCCCAAAAGAGTTTATGATATTAAGTCCCTCAACGGC AATTTTTCAAAAGTTCGCTTCGCATCGAATGTTTACGTTCCACGACATTT CACCTCCCCAATTTCTAGTACATGACTGTTGGCACCACAGTCTATTGGTA GAGTGCTACTTTTTCGTGTATCGAAAAATACCCACTAGTAAATTAGGTGG TTGTGTCGTACGTATTTATACGAGTTGCGATAAATGTAAACTATACAAAC TGTATACATATCGAAACGAGTCTCTTCCTTCGGAGTTTCGCTGTTCCCCA CTCGTAAAACTGTGTTTCCCGGGGCATTACAGTAGTTAGGCTCCCGGGCA ACACGCGGCGAAAGGTGTTTCGCGGGGGGCGGTGGAGGGCCCTGGGGAGG CCACCGGAGGGTCGCCGGAGTATTTATTTGAAAATCAGTTGACAAAGTGC GTTTAGACGCCTCCTGAACCCCGAAACGGCACAAAAACGTGCCTCAAATA TGTATTTTCAAACGCAACCACAACTTGCGGCGAAAAAGTTTCGACGCGCG AAGCCCAAGTTGCGACACGCCTTAATTGCACGTCTATTTTGTGGCCTCCA CCGTGGTAAACCGCGGTTGTTCCGCCCGGAAAGTTTTGCCCGCCCAAGAG CTACCGTAGTCAAAGTCCTGCGGAGTATGTATCAGGTACGCCGTTTCGTT CCCGAAGCGATTTGATATACCGATCGTGAGCGTGAAACTGTCACTCCATC GGGCCAACATGATCCCGTTGGATAGCATGATACTTCGTGTGCTTCCACTC CCACGTTCCCACGCCAGGCCAACCTCGGTCTCCGTTGGCAGGACGTTGTT AGTGAGAACCTGAAACTGTAGCTCGCCAGGCGTTTGCGTCCTCCCTTTGT CGCTATGATAAGAATGATAGCGAACGATACCGCATCATAGACCTACGTAC GTGTTACTTACCAAATCCAGAAGCACCCACACACGTACACTCATTTTTTT GTGTATTGTCTCATGACCCGCATCCCACGTATCAGGTATCTTACAGCCAT GCGCCCTGCGGAATGTGCGGGCGCCGCTGCAGGCGTGTGTCAGGTTTCAA GTTTTCTGTTTTGACGCCGTCCCCTATTTTTGGACTATCAAGTATTAATA GAACGCACTTTATGGGGACAACGTAGAATACCAGGTATGAGTTTTTTTGC GGTAGTAGGAGGGCTCATCACCTACCCATCCTGAAAATCACACACCACTC TGCCTGCGCCCACGCCTCCTTTCTCTTCACGCTTTATTATTCCTCTGTAT GAACGCGATGACTGATCAGGGTTGGGGAAGACTGTGGTAAACCCTTCAAA GTAACTTCAGTTCATTTTGGGGGAAAACTACTTTGATTTAGAGTTGACTC ATTTTTCTAGGAGAAGAAGAGTTTAATACTCATTCTAAAACTCACACACC ACACTGATTGCACCTATCCCTCCTTCTATACGAGTACTAGTCATTTATCG TCCCCTTTGTGATCGCGTTAAATGGCCAGGCTTAGGAAAGACTGTCGTGG CTGTCGTGAACACCTCCCTAATGGACAACCACCAGGAAGAGCTCGCGGAT GCATTGGCCATGCGCAACTACCTCCTAGCCACGACGCCTCACGAGCTAGC CCGAGTTCTGGTGGAGCTGGACGATTCACCGTCTGCTAGGACACCGTACC CGCCAGCCAGGCCAGAAGTCTTTGCCGCTATCGTGGACGAGGAGGTGTGC GCAGCGCGCGACCAGGAGGGTAGGACGTGA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig1195:24103..27682-

>mRNA_M-pyrifera_M_contig1195.4031.1 ID=mRNA_M-pyrifera_M_contig1195.4031.1|Name=mRNA_M-pyrifera_M_contig1195.4031.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1068bp|location=Sequence derived from alignment at M-pyrifera_M_contig1195:24103..27682- (Macrocystis pyrifera P11B4 male)
ATGGGAAAGCACGTGTTCGTCACGGTGGGCACCACCAAGTTCAACTCCCT
CATTGCAGCCGTCGAGGATCCTGAGGTTCTATCCACCTTGTCCTCCAAAG
GCTACACGTCGCTCACCGCACAGATCGGCCATGGCGACCACGTGCCCACC
TTCGCTACTGCTCCGCAATCGATGGGAAAGCACGTGTTCGTCACGGTGGG
CACCACCAAGTTCAACTCCCTCATTGCAGCCGTCGAGGATCCTGAGGTTC
TATCCACCTTGTCCTCCAAAGGCTACACGTCGCTCACCGCACAGATCGGC
CATGGCGACCACGTGCCCACCTTCGCTACTGCTCCGCAATCGGGCGAAAT
CGAGTGCAGGTGGTACCGCTTCAAGCCGACCCTGCAGGAGGACATGTCGT
TAGCCGATACGGTCATAACCCATGCCGGAGCCGGCTCCGTCATGGAAGCG
CTTGGGCGAAATCGAGTGCAGGTGGTACCGCTTCAAGCCGACCCTGCAGG
AGGACATGTCGTTAGCCGATACGGTCATAACCCATGCCGGAGCCGGCTCC
GTCATGGAAGCGCTTGGCTTAGGAAAGACTGTCGTGGCTGTCGTGAACAC
CTCCCTAATGGACAACCACCAGGAAGAGCTCGCGGATGCATTGGCCATGC
GCAACTACCTCCTAGCCACGACGCCTCACGAGCTAGCCCGAGTTCTGGTG
GAGCTGGACGATTCACCGTCTGCTAGGACACCGTACCCGCCAGCCAGGCC
AGAAGTCTTTGCCGCTATCGTGGACGAGGAGGTGTGCGCAGCGCGCGACC
AGGAGGGTAGGACGTGAGCTTAGGAAAGACTGTCGTGGCTGTCGTGAACA
CCTCCCTAATGGACAACCACCAGGAAGAGCTCGCGGATGCATTGGCCATG
CGCAACTACCTCCTAGCCACGACGCCTCACGAGCTAGCCCGAGTTCTGGT
GGAGCTGGACGATTCACCGTCTGCTAGGACACCGTACCCGCCAGCCAGGC
CAGAAGTCTTTGCCGCTATCGTGGACGAGGAGGTGTGCGCAGCGCGCGAC
CAGGAGGGTAGGACGTGA
back to top