prot_M-pyrifera_M_contig119496.4029.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig119496.4029.1
Unique Nameprot_M-pyrifera_M_contig119496.4029.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length161
Homology
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BLAST of mRNA_M-pyrifera_M_contig119496.4029.1 vs. uniprot
Match: UPI00053C98BB (acyl-CoA-binding domain-containing protein 4 n=1 Tax=Tarenaya hassleriana TaxID=28532 RepID=UPI00053C98BB)

HSP 1 Score: 57.4 bits (137), Expect = 1.280e-6
Identity = 48/169 (28.40%), Postives = 72/169 (42.60%), Query Frame = 0 
Query:    2 RWWIPLVTGEGPGKRSGASMTTMSGSEAVVIGGFNGVDMLSDVHVLDMNEMHWRRVEVRGVGLPLP--------PLVGHAVVRVPNTNRVVLIGGSCSPEHLLTASFLLDPHSSTGAIVAAIGLNGEGNNPAPRFWHRASVTADGK-VIIFGGSSDRGIAFADFHTLNL 161
            +W  P  +G+ P  R       +     +  G  NG   LSD+HVLD+    W RVE +    PL         P  GH+++  P  N+++ +GG            + DP +ST + +   G      +P  R     SVT  GK ++IFGG   +     D H L+L
Sbjct:  170 QWIAPQTSGQRPKARYEHGAAVIRDKMYIYGGNHNG-RYLSDLHVLDLKNWTWSRVETKVATEPLESSSPVTLTPCAGHSLI--PWDNKLLSVGGHTKDPAESIQVKVFDPQTSTWSTLKTYG-----KSPVSRGGQ--SVTLVGKSLVIFGGQDAKRTLLNDLHVLDL 328
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BLAST of mRNA_M-pyrifera_M_contig119496.4029.1 vs. uniprot
Match: A0A7S4IUU8_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4IUU8_9EUKA)

HSP 1 Score: 56.2 bits (134), Expect = 3.070e-6
Identity = 44/150 (29.33%), Postives = 68/150 (45.33%), Query Frame = 0 
Query:    2 RWWIPLVTGEGPGKRSGASMTTMSGSEAVVIGGFNGVDMLSDVHVLDMNEMHWRRVEVRGVGLPLPPLVGHAVVRVPNTNRVVLIGGSCSPEHLLTAS-FLLDPHSSTGAIVAAIGLNGEGNNPAPRFWHRASVTADGKVIIFGGSSDRG 150
            +W    V G+ P   +G S     G++  V+GGFNG D  S +H+LD   M W +  + G     PP   +  + V +  ++ L GG C          F+LD        +    +  EG++P  R+ H A V  D  + +FGG + RG
Sbjct:   19 KWTKAEVQGKFPSAYAGGSCCI--GTKIYVVGGFNGSDDSSTLHILDTETMKWTQPLILG---EKPPARSYHTLSVVD-GKLYLFGGFCKATATTMGDMFVLDTRRER---LEWKQITWEGHSPIERYEHSADVL-DHYIYVFGGGNSRG 158
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BLAST of mRNA_M-pyrifera_M_contig119496.4029.1 vs. uniprot
Match: A0A7S1M6D1_NEODS (Hypothetical protein (Fragment) n=1 Tax=Neobodo designis TaxID=312471 RepID=A0A7S1M6D1_NEODS)

HSP 1 Score: 53.9 bits (128), Expect = 1.830e-5
Identity = 33/92 (35.87%), Postives = 51/92 (55.43%), Query Frame = 0 
Query:    9 TGEGPGKRSGASMTTMSGSEAVVIGGFNGVDMLSDVHVLDMN--------EMHWRRVEVRGVGLPLPPLVGHAVVRVPNTNRVVLIGGSCSP 92
            TG  P  R+GA+MT + G+  V+ GG      L+DV V  ++        E+HW +V+        PP  GHA+V  P+TN ++++GGS +P
Sbjct:  235 TGAVPSPRAGAAMTVVGGA-LVLAGGRGSSGALNDVFVGAVSRDLEDGEIEIHWIQVKCAA---SFPPRTGHAIVHAPDTNSLLIVGGSSAP 322
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig119496.4029.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
UPI00053C98BB1.280e-628.40acyl-CoA-binding domain-containing protein 4 n=1 T... [more]
A0A7S4IUU8_9EUKA3.070e-629.33Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S1M6D1_NEODS1.830e-535.87Hypothetical protein (Fragment) n=1 Tax=Neobodo de... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF13415Kelch_3coord: 27..75
e-value: 6.1E-5
score: 23.2
NoneNo IPR availablePFAMPF13854Kelch_5coord: 124..161
e-value: 4.2E-5
score: 23.4
NoneNo IPR availablePANTHERPTHR46093:SF5coord: 9..161
NoneNo IPR availablePANTHERPTHR46093FAMILY NOT NAMEDcoord: 9..161
IPR015915Kelch-type beta propellerGENE3D2.120.10.80coord: 2..160
e-value: 4.5E-13
score: 50.8
IPR015915Kelch-type beta propellerSUPERFAMILY117281Kelch motifcoord: 4..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig119496contigM-pyrifera_M_contig119496:53..535 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig119496.4029.1mRNA_M-pyrifera_M_contig119496.4029.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig119496 53..535 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig119496.4029.1 ID=prot_M-pyrifera_M_contig119496.4029.1|Name=mRNA_M-pyrifera_M_contig119496.4029.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=161bp
MRWWIPLVTGEGPGKRSGASMTTMSGSEAVVIGGFNGVDMLSDVHVLDMN
EMHWRRVEVRGVGLPLPPLVGHAVVRVPNTNRVVLIGGSCSPEHLLTASF
LLDPHSSTGAIVAAIGLNGEGNNPAPRFWHRASVTADGKVIIFGGSSDRG
IAFADFHTLNL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015915Kelch-typ_b-propeller